BLISSBreaker Lab Intergenic Sequence ServerHome

Intergenic view options: Interleaved

NC_000964.1 Bacillus subtilis (+ 960495 to 960845) circular

Islands  G..A.CACC.C..GGAA...A.AAGAACA.AA.A.CA.C.C.AAG.,,,,,G.CAA.A..A....A.AA..A..A.,,,,
5'-   GTTATCACCTCTTGGAATTTATAAGAACATAATATCATCTCTAAGTAAAAAGTCAATATTATTTTATAATTATTATAAAA
       |         |         |         |         |         |         |         |    
       960500    960510    960520    960530    960540    960550    960560    96057
       |         |         |         |         |         |         |         |    
3'-   CAATAGTGGAGAACCTTAAATATTCTTGTATTATAGTAGAGATTCATTTTTCAGTTATAATAAAATATTAATAATATTTT
Islands  CAA.AG.GGAGAACC..,,,.A..C..G.A..A.AG.AGAGA..CA.....CAG..A.AA.,,,,.A..AA.AA.A....

  
Islands  .AG..A.C.C.A..AA.CGA.A.A.AG.A.CG,,,..G..G,,,,,CC..G..G.AACAGC.....A.GACAC..AA.AA
5'-   TAGTTATCTCTATTAATCGATATATAGTATCGAAATTGTTGAAAAACCTTGTTGTAACAGCTTTTTATGACACTTAATAA
       |         |         |         |         |         |         |         |    
  0    960580    960590    960600    960610    960620    960630    960640    96065
       |         |         |         |         |         |         |         |    
3'-   ATCAATAGAGATAATTAGCTATATATCATAGCTTTAACAACTTTTTGGAACAACATTGTCGAAAAATACTGTGAATTATT
Islands  A.CAA.AGAGA.AA..AGC.A.A.A.CA.AGC...AACAAC.....GGAACAACA..G.CG,,,,,.AC.G.GAA..A..

  
Islands  .....GGAG,,,.AA.....CC..C.C.A...GCG,,,CAAGCAGAG.AAG.GA.,,,CAAGGA.A.C,,,,,.CG.A..
5'-   TTTTTGGAGAAATAATTTTTCCTTCTCTATTTGCGAAACAAGCAGAGTAAGTGATAAACAAGGATATCAAAAATCGTATT
       |         |         |         |         |         |         |         |    
  0    960660    960670    960680    960690    960700    960710    960720    96073
       |         |         |         |         |         |         |         |    
3'-   AAAAACCTCTTTATTAAAAAGGAAGAGATAAACGCTTTGTTCGTCTCATTCACTATTTGTTCCTATAGTTTTTAGCATAA
Islands  ,,,,,CC.C...A..,,,,,GGAAGAGA.,,,CGC...G..CG.C.CA..CAC.A...G..CC.A.AG.....AGCA.,,

  
Islands  .,,,,,,GAG..GACA.A.CGGAA.AA...GAA..AACA.G..A..C,,,C,,,,,,,CAA..GGGCAGC.GA.CGGACC
5'-   TAAAAAAGAGTTGACATATCGGAATAATTTGAATTAACATGTTATTCAAACAAAAAAACAATTGGGCAGCTGATCGGACC
       |         |         |         |         |         |         |         |    
  0    960740    960750    960760    960770    960780    960790    960800    96081
       |         |         |         |         |         |         |         |    
3'-   ATTTTTTCTCAACTGTATAGCCTTATTAAACTTAATTGTACAATAAGTTTGTTTTTTTGTTAACCCGTCGACTAGCCTGG
Islands  ,......C.CAAC.G.A.AGCC..A..,,,C..AA..G.ACAA.AAG...G.......G..AACCCG.CGAC.AGCC.GG

  
Term (99.99)%  ------GGCTCTCATCTCTACTAGAACAGAG
Islands  GCCGAAGGC.C.CA.C.C.AC.AGAACAGAG
5'-   GCCGAAGGCTCTCATCTCTACTAGAACAGAG
       |         |         |     
  0    960820    960830    960840    
       |         |         |     
3'-   CGGCTTCCGAGAGTAGAGATGATCTTGTCTC
Islands  CGGC..CCGAGAG.AGAGA.GA.C..G.C.C

IGR  +  960495  960845  ()  15  ygaL ygbA ygaM ygcA

Blast Hits

ID Organism Class Accession Start End Operon
0 Bacillus subtilis B/C NC_000964.1 + 960495 960845 ygaL ygbA ygaM ygcA [COG1116 COG0715 COG0600 COG2141]
1 Clostridium tetani E88 B/C NC_004557.1 - 2016718 2017343 CTC01895 [COG0491]
2 Mycoplasma penetrans B/C NC_004432.1 + 353826 354127 MYPE2700 [-]
3 Clostridium tetani E88 B/C NC_004557.1 + 406311 406475 phoP phoR CTC00413 CTC00414 [COG0745 COG0642 - -]
4 Bacillus subtilis B/C NC_000964.1 + 958317 958797 senS [-]
5 Staphylococcus epidermidis ATCC 12228 B/C NC_004461.1 - 1553765 1555041 SE1506 SE1505 SE1504 SE1503 [- - - -]
6 Listeria monocytogenes strain EGD B/C NC_003210.1 - 2872785 2872931 kat [COG0753]
7 Listeria monocytogenes strain EGD B/C NC_003210.1 - 2031197 2031437 fur [COG0735]
8 Methanosarcina mazei strain Goe1 A NC_003901.1 - 1547853 1548907 MM1300 [-]
9 Oceanobacillus iheyensis B/C NC_004193.1 - 1881055 1881159 OB1849 [COG0735]
10 Bacillus subtilis B/C NC_000964.1 - 960495 960845 katA [COG0753]
11 Rickettsia conorii Malish 7 P-a NC_003103.1 + 670209 670303 RC0695 [-]
12 Sulfolobus tokodaii A NC_003106.1 + 967814 968282 ST0990 [-]
13 Borrelia burgdorferi plasmid lp54 Sp NC_001857.1 + 25040 25388 BBA38 BBA39 [- -]
14 Borrelia burgdorferi plasmid lp28-3 Sp NC_001853.1 - 27446 27624 BBH40 [COG0675]

0  ________________________________________________________________________________
1  AGGAGATGAATAAATGGATTATATTATAAAATTCATCATATATTTAGGCTCTGTGCAAAGATTACACAGAATAAGTATTT
2  TAAATCTAAAAACAA-----------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  CTCGCTTAAATCAATAACAAGACCGTTATTTAAAAGGGAAAAGTTCTCATAGCTGTGTCTGCCGCCTCTAATACGGAAAG
5  TATTAATTTGAAACCTAAAAACAATTTATAGAATATTATGATATTTAACTTGACAAACAACTTTAATATCGGCTACATTA
6  ATGATAAAAAGCAATCTCTCCTAAGAGATTGC------------------------------------------------
7  TAATAATTATTGATAACGAGAAATTAATTAGTAATTGATAATCATTGTAGACAGCCTATTGCTTTTGTGATATCTTAGTA
8  TGGCTGCAGTTCCCCCTTTACCTGTTCAGCACCCAGAACCGATAAATCCTCTCTTTAAAGCCCTTCCAGGTTTTCAATTT
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  GTCTTTCTCATCGTAAATTTAAGGG-------------------------------------------------------
13  TTTAATTAGATTTTCTGCATTTCAATATTAAAAG----------------------------------------------
14  TTAAATATGATAAAGATAATCTGCCTAATGTGGAGGGTAAAGATGAAGTACATAATATAGATGCGAAAGATTTTTATCTA

  
0  ________________________________________________________________________________
1  GTTCAGGGCCTAATTTATTAGATTAATTTACTCAATTTTGTTTTGTGTGATCTTTGCTTCGTTATTTACTAATGATAAAG
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  GCACACGGTTTTCACGCGCCCATTTCAGCGCATTGAGTGCA---------------------------------------
5  TCATTAATCAAATAAGAATTATTATACGTCTATTAATATACATTAAATTTAGACATATAAAAAAGGGGAATAAAGAAGAT
6  --------------------------------------------------------------------------------
7  AACATAAG------------------------------------------------------------------------
8  CCTGTGGAAAATACTTCCAGATTCTTTTAAACTTCCCCATTTGTTACTTTTCTGGAAGGAATCCTGAAAAATTGGTTATC
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  AAAATAACAAAGAATACTCCA-----------------------------------------------------------

  
0  ________________________________________________________________________________
1  TAGATAGGAGCAATAATATGAAATATAAAAACGCACAAAATATATTACCTGATTATATTATTAAATTAATTCAAGAATAT
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  AAATTGGCGTTTATCAACTTTACATCATCTAACCACTAACTGTACTAGTGACTAGACTTATCCCCATAACTTTGTGTGAT
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  GGTAAAATCCTTCTTTTAAGTATCTTTCCGGTTTTTTCCTGTAAATCTCTTTCCCGCACTTCTGAGACCTTTTTATGACA
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  ATAGAGGGTGAATATTTATATATACCAATAAAGTACCAGAATAAAAAGGCTTGGGGAGAAAATACTGGTGCAAGAGATAT
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  GATTAAATTATATTGGCGTATAATTTAATCAAATAACACTTATT------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  CTTAATATATACGAGTCAATGGTACATAATGATAACGGCATTCCTTTTTAGCATGATCTAAATTTTCCTCTAAGACGGCG
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  TTTAAA--------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  CTGAGTCTCTTTTTTAAGGTTGAGATTTATGTCTTCTTTAAGCGCAATTTCTTAAAGTCAGTCAGGAATTTTTTAATAAC
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ______________________________GTTATCACCTCT_TGGAATTTATAAGA_AC____A___TAATATCATCTC
1  ------------------------------GATAAGAAACAT-AGAAATTTTTAATA-ACTATAA---TAATGGAACATC
2  ------------------------------ACTATATTAAAT-TTATTTTTATAAGA-AA----AAGGTAGAGTTAATGC
3  ------------------------------------------------------------------------TTTATATA
4  ------------------------------TCCTGTTTGTTT-TGGCAAAACACAAT-GA----T---GTCAGGATACCT
5  ------------------------------TAAATATATTAT-ATAGCACAGGGCGT-TG----C---AATAGTTTATGA
6  ------------------------------TTTTTATAAGCC-TTTTAGTTGAAGTT-TG----T---CTCTCCCTTCTT
7  ------------------------------CAATAGGAATTG-ACTACGTGCCATTT-TT----A---CTGTAAAAAGTG
8  CCCCTTATTTCCACTGGAGATTTTTGCTCAGAATGAAAAATA-TCGAGTCATGTAGA-AA----A----AATATTAGGGG
9  --------------------------------------------------------------------------------
10  --------------------------------------CTCT-GTTCTAGTAGAGAT-GA----G---AGCCTTCGGCGG
11  ----------------------------------------------------------------------TAACCTTAAC
12  ------------------------------GAAATAACATTT-TCCAATGTAAAATATAC----C---TTGTTCCATCTA
13  ------------------------------GTAGAGAAACAG-CTCTCTACCTTTTT-AA----T---ATTTATTGGGAT
14  ------------------------------CCTATAATTTCTATGAAATTTAGGTGG-AG----A---TGA----ATTTG

  
0  TAAGTAAAAAGT____C___AATATTATTTTATA___A_TT_________ATTATAA___AAT___AGTT_AT_C_TCTA
1  TATTAAAAAACTTGCAC---AACATTATTATCTC---A-CTGAGCATAGTATTAGAAG--AAT---AATT-AGAC-AAGA
2  AAATTAACTCTA----C---CTTTTTTACTTTTG---T-TT---------ATT-TAA---CAT---ATTTCAT-T-TATA
3  TAATTTAAAAGC---------AGACTATTTTATA---ACTT---------TTTATAA---AAT---AGTT-TG-C-TTTT
4  TTCTAAGCTTAG----G---TTAATATTGGTTCT---T-GC---------TTCGTTA---TAG---TCCG-GA-T-CATC
5  GCTGTAAAAA-T----A---AAAATTATTTTATA---T-TT---------ATTATAA---A------GTT-AT-G-GATA
6  TAAAATATAAAT--------AGTATCATTTAATA---A-TT---------ATTATAA---ATA---AAAA-TG-A-TATA
7  AATTCCTAACTT----G---CATTTTATTT-ATA---A-TT---------ATTATAA---ACT---GTAT-TT-A-T-TG
8  GAAGTAGCAGGT----GGGAAATATTCTTTTTTAAAAA-TT---------GTTAAAA---AGA---ATAA-AA-C-ATTC
9  -----------T----C---GATATTATATTATA---A-TT---------ATTATAATTTAAA---AGTG-AT-A-ATAC
10  TCCGATCAGCTG----C---CCAATTGTTTTTTT---G-TT---------TGAATAA---CAT----GTT-AA-T-TCAA
11  TTTTTATTGTAA----A---AATATTAATTTATAT--A-TT---------ATTATAA---AAATCAACTT-AG-GGTAAA
12  TAATCTAGTCCT----T---T-TATTATTTTACA---A-TT---------ATCATAA---AAA---ACT--AT-A-T---
13  TGGATAAAGTAT----T---AATTTAATTTTCTT---T-TT---------AATATCA---TTT---TACA-AT-G-TCTA
14  TAACGCAAGTTA----A---AATATGATTTTATA---A-TT---------ATAA-AA---AAT---A-------------

  
0  TTA__A__T__CGATATATAGTATCGA____AATT___________GTTGAAAAAC__CT_______TGTTGTAA____C
1  AAA--ACAT--GTATAAATAAAATCGGTATTAATT-----------ATCTAAAATC--AG-------AATTAATA----C
2  T----A--T--CAAAA-ACACTATGGA----AGCT-----------TATAAAACTG--CACTGAAAATGAAATAAAATAC
3  TCT--T--G--CTTTTAATTAAAATGA----ACTT-----------ATTTGCTTAA--AT-------ACTGTAAG----A
4  CCG--T--G--TCACGATACGTCCGGT----CAAT-----------TTTGTCTTTT--CC-------ACACTCCC----A
5  TTATCA--A--TGAGATTTTGGATAGG----ATTTAGCAATCACAATTTTAAAGTG--GT-------TGTTAAAT----C
6  GAA--T--T--GTTATGGAGGTATATA----CAT----------------------------------------------
7  TTA--A--A--TGATAATGATGAT-------AATT------------TAGAAAGACAACT-------TGTTGTAG----C
8  TTA--A--T--T-ATATTTAGAA-CGC----TATT-----------GAT------------------TTTTCTCA----C
9  ACT--T--T--GACACGTTGTAATTGG----AAGA-----------TTATAATATA--GT-------TGGGTAAA----G
10  ATT--A--TTCCGATATGTCAACTC--------TT-----------TTTTAAATAC--GA-------TTTT-TGA----T
11  ATA--G--T--TGATATAA--TAAAAA----AATT-----------GTCGTA----------------------------
12  TTT--A--T--AGAAATATCTTCCCTT----TTAT-----------CTTCATTTTT--AA-------GCCCAGAC----T
13  TTT--T--T--TAACA-ATGCTAGCAA----AAGTAA---------GTAGAATA-------------TTTTGTAA----G
14  --------------------------------------------------------------------------------

  
0  AGC___TTTTT_ATGAC_ACTTAAT__A__ATTTTTGGAGAAATAA__TTT________TTCCT_TCTCTAT____TTGC
1  CGA---TTTTTTATTAGTACTTTAT--G--AATAT-GGACAACT----TTA--------ATACA-TAATTAT----TTGT
2  ATA---TATTT-TTTGC-ATTTAGTTTA--ATTTTTGGAGAAGTAA--TTT--------GCATTATTTCTAC----TTCT
3  AAT---TCTAT-AATAT-AAATGAG--T--ATAAAGTATCTAAATT--ATA--------GATTA-AAAGTGA----GGTA
4  CAT---CTCTT-TCTCT-CGTATTC--T--AGTTTCTCTAGCTTAT--GCG--------TCAGG-GGAAAAG----AGTG
5  CTT---TTTTT-GTTCC-TCTTTTT--T--ATTTGTTTAAATAGGA--GGT--------T-CCT-ACA-TAT----TTGA
6  --------------------------------------------------------------------------------
7  AAC---CAAGG-GAGGA-ACTATA--------------------------------------------------------
8  AGGAAATCTTT-CTAAC-CCCTA-T--A--TTTCTACTGGAATTTACTTTT--------TTACT-TTTTTGC----TTGT
9  AGG---GAGGC-GACTA-TCC-----------------------------------------------------------
10  ATC---CTTGT-TTATC-ACTTACT--CTGCTTGTTTCGCAAATAG--AGA--------AGGAA-AAATTAT----TTCT
11  --------------------------------------------------------------------------------
12  GGG---GATGA-TGAAG-TAGAAGT--T--GATGTCGAGGTAGTGC--TTG--------TGGAA-CTAGTAC----TTGA
13  TTT---TACTT-ATATT-CTTTAATT-A--ATATTAGCATAAATAC--TTTAAAACGTATTAGT-TTTTTATAAAATTTT
14  --------------------------------------------------------------------------------

  
0  GAAACAAGCAGAGTAAGTGATAA__ACAA___GGATATCAAAA_ATCGTATTTAAAAAA____GAGTTGACATATCGGAA
1  GAACTT----GAGAAA-TGATAT--AGAA---TAAGTTTAATA-----TATTTATGAAA----ATATTATGATATGCAAA
2  TAAATTTTTCTTTATTTAACTGG--TAAA---TTTGTCGTTTT-TATAATTTCAAAATT----TGAAAGGTAATAATTAT
3  TTGTT---------------------------------------------------------------------------
4  TATAAGGAAAAAGCGGGGATGCA--ATCT---GATACAGTGTC-AACACCCTCAAAAAA----TAGTTGACAGGTCGGTA
5  AAAATAA-CAGGCTTATTTATA----CAA---GAAAACCAGTA-A--GTATTTATGAAT----TAATTCA-ATATGGCTA
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  ATTTATTTGAGTGTAAATTTGCA--AATA---TCTTTTGAAAA-ATAC-----AAAAAA----TCCTGAAGGGATTAGCC
9  --------------------------------------------------------------------------------
10  CCAAAAATTAT--TAAGTGTCAT--AAAA---AGCTGTTACAACAAGGTTTTTCAACAATTTCGATACTATATATCG--A
11  --------------------------------------------------------------------------------
12  AGTTGTTGTTGTACTAGTTGTTG--ATGT---CGAGGTAGTAC-TTACTGCTGTATGGG----GCATTGCTGCCAGTGCA
13  AAATCAATTTTAAATTTTAATATTTACATTTTGAATATCAATA-TTG---TTTAATAAT----TAATAT-CAAATAATAA
14  --------------------------------------------------------------------------------

  
0  TAATTTGAATTAAC_A__TGTT__ATTCAAACAAAAAAACA_ATTGGGCAGCTGATCGGACCGCCGAAGGCTCTCATCTC
1  TAATTTTTGGAGGA-A--TAAT--TA------------------------------------------------------
2  TAACTAAAT-----------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  TTGTATGAATTAAC-A--TGGTCAGTACAAATTTTTCAAAT-TTATCGC-GCTGATCGGAACACCGAAGGCTCTTATCGT
5  TAAATATAAATGTC-G--TAAT--GGAAAAACATATATCAATATTGGGAATGGCTATTGTATACATCAAACTTATTTAAT
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  GAA----AATAAGT-A--TGTT--AGTATAAGGTGAAAATA-ATTGACATCTTGACAAATTCAGTAAATTCAGACAAAAA
9  --------------------------------------------------------------------------------
10  TTAATAGAGATAACTA--TTTT--ATAATAATTATAAAATA-ATATTGACTTTTTACTTAGAGATGATATTATGTTCTTA
11  --------------------------------------------------------------------------------
12  AAGAATACTCCTCC-A--ATTA--TTAGTATAATTGCTGAG-AGTGCAATTAATACAAGTCCAATTTTGTCTAGTTTCAT
13  CAATTTGAATAAAA-AACTGTT--TTTGATATAATAATGTA-TA------------------------------------
14  --------------------------------------------------------------------------------

  
0  TACTAGAACAGAG___________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  T--TAGATAAGGGCCTTTTTTGT---------------------------------------------------------
5  AAAAAATGACCTGCTGATGCAACGCATTCGAACTGTAAATAATATTAGTAATATTATTCTTTCAGTTTTTGATAGTAACA
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  CATAATGTAAAAATCTGGATAGAATCCAATGCTCCTCCAGCAAAATATAAGTATAAAAATTAAAAGCTGTAAAAGCTCAA
9  --------------------------------------------------------------------------------
10  TAAATTCCAAGAGGTGATAAC-----------------------------------------------------------
11  --------------------------------------------------------------------------------
12  GACCTTTACATCATTTTTATTGATTATAAACTTTTTCCCAATATTCTCTTTTCAATACAACTTTTGATTTAGGAAAAAAT
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  ACAGATTGATATTTAAGAGAAATCGGAAAGGTATTTTAGTAAAAATACGATTTGTAAAAAGAAAGGAAAAATTTGCTATT
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  TGTTAAATAAATATATAAAGTAAAAGTCAATGTATAGTGAAAATAAACAGATGAATAGAAAACAGATGAATCGGCGGAGA
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  TAATTAAGTAGTCAATTAAATATTACTTTT--------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  GAACAATCAATTAATACGAATAATTGAAATTTTGAAACAACAAAATGTTAAAGCGACTTTAGTTAAAGTAAAAAAATAAA
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  ATAAAATTAAATAACAAATAAGATAAAAATAAAATTAGGCGAAATCGAAAACAGATGAAATAGATAGAGTATCCTGCTTT
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  TGCTTAGATTTGGTACTTGACTCGTACAAATATATTAATTTGTACAGCACATTGACAATTTAATATAGGTACTCGGGCTT
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  CGGCAGGTAAACCTATAAATTAATATCATTAATTTTATATCTCTCTCTTGGTAATCCC----------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  GCACGAAACCGTAACTAGCAAGTTTAACTGTATCATTTTGAATACAGCCCGTAAGAGCAATAGCTACTAATATCGGTTGG
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  TCAGATTTGTACATAGGTACAAGAAATCTTTTGAAAAATAAATAGAAAAGACTACTGTTAATACATTTTGCGATGAGATG
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  AGCGAAACTAGGTAATTGCGATGAGATGAGCGATTCGGTATTAATTAAGGTTCGATGCTTCAATGCCATAAAGCACAATA
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  TGACCCTTATTATCTTTTATAATCACTTAAACATTTAGAATGTATTTGTACGAGTGAAGTGCCAATTTTATATAAAAGTT
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  _____________
1  -------------
2  -------------
3  -------------
4  -------------
5  TAGATGAATGTAG
6  -------------
7  -------------
8  -------------
9  -------------
10  -------------
11  -------------
12  -------------
13  -------------
14  -------------

Complementary Intergenic Regions

IGR  -   960495  960845  ()  16  katA