BLISSBreaker Lab Intergenic Sequence ServerHome

Intergenic view options: Interleaved

NC_000964.1 Bacillus subtilis (+ 955153 to 955402) circular

Islands  G.GCG,,,.CAA.AG..AC.GGGGG.GCCCGC...CGGGC.GAGAGAGAAGGCAAGC..C..AACCC...GGACC.GA.C
5'-   GTGCGAAATCAATAGTTACTGGGGGTGCCCGCTTTCGGGCTGAGAGAGAAGGCAAGCTTCTTAACCCTTTGGACCTGATC
         |         |         |         |         |         |         |         |  
         955160    955170    955180    955190    955200    955210    955220    955
         |         |         |         |         |         |         |         |  
3'-   CACGCTTTAGTTATCAATGACCCCCACGGGCGAAAGCCCGACTCTCTCTTCCGTTCGAAGAATTGGGAAACCTGGACTAG
Islands  CACGC...AG..A.CAA.GACCCCCACGGGCG,,,GCCCGAC.C.C.C..CCG..CGAAGAA..GGG,,,CC.GGAC.AG

  
Islands  .GG..CG.ACCAGCG.GGGGAAG.AGAGGAA..G.....G..A..G.C..GC.GGGCAA.AA.A.G...C...C.GAC.G
5'-   TGGTTCGTACCAGCGTGGGGAAGTAGAGGAATTGTTTTTGTTATTGTCTTGCTGGGCAATAATATGTTTCTTTCTGACTG
         |         |         |         |         |         |         |         |  
  230    955240    955250    955260    955270    955280    955290    955300    955
         |         |         |         |         |         |         |         |  
3'-   ACCAAGCATGGTCGCACCCCTTCATCTCCTTAACAAAAACAATAACAGAACGACCCGTTATTATACAAAGAAAGACTGAC
Islands  ACCAAGCA.GG.CGCACCCC..CA.C.CC..AAC,,,,,CAA.AACAGAACGACCCG..A..A.AC,,,G,,,GAC.GAC

  
Term (99.85)%  ---CCGGGTTCATTTATATGAATCCGG-----------------------------------------------------
Islands  .AACCGGG..CA...A.A.GAA.CCGG......G.GC.GG..A.GGGC..GA....G.CC...C,,,CG.AG,,,GGGGA
5'-   TAACCGGGTTCATTTATATGAATCCGGTTTTTTGTGCTGGTTATGGGCTTGATTTTGTCCTTTCAAACGTAGAAAGGGGA
         |         |         |         |         |         |         |         |  
  310    955320    955330    955340    955350    955360    955370    955380    955
         |         |         |         |         |         |         |         |  
3'-   ATTGGCCCAAGTAAATATACTTAGGCCAAAAAACACGACCAATACCCGAACTAAAACAGGAAAGTTTGCATCTTTCCCCT
Islands  A..GGCCCAAG.,,,.A.AC..AGGCC,,,,,,CACGACCAA.ACCCGAAC.,,,,CAGG,,,G...GCA.C...CCCC.

  
Islands  AGG,,,,G.A
5'-   AGGAAAAGTA
         |  
  390    955400    
         |  
3'-   TCCTTTTCAT
Islands  .CC....CA.

IGR  +  955153  955402  ()  19  thiA

Blast Hits

ID Organism Class Accession Start End Operon
0 Bacillus subtilis B/C NC_000964.1 + 955153 955402 thiA [COG0422]
1 Streptococcus mutans UA159 B/C NC_004350.1 - 666061 666216 SMU.706c [COG3859]
2 Oceanobacillus iheyensis B/C NC_004193.1 - 678731 679268 OB0643 [COG2145]
3 Xanthomonas campestris pv. campestris str. ATCC 33913 P-g NC_003902.1 - 3943190 3943963 thiC [COG0422]
4 Clostridium perfringens B/C NC_003366.1 - 2917153 2917576 CPE2546 CPE2545 [COG0819 COG3859]
5 Clostridium perfringens B/C NC_003366.1 - 1876141 1876415 CPE1603 [COG2104]
6 Bacillus halodurans B/C NC_002570.1 + 901779 902393 BH0830 [COG3859]
7 Streptococcus pyogenes B/C NC_002737.1 - 482816 483083 SPy0600 [COG3859]
8 Clostridium acetobutylicum ATCC824 B/C NC_003030.1 + 3060500 3060780 CAC2928 [COG3859]
9 Staphylococcus aureus subsp. aureus N315 B/C NC_002745.1 - 1055873 1056334 SA0929 SA0928 SA0927 [- COG1122 COG0619]
10 Ralstonia solanacearum P-b NC_003295.1 - 132264 132680 thiC RSc0112 RSc0111 [COG0422 COG0665 COG2104]
11 Clostridium perfringens B/C NC_003366.1 - 1580862 1581168 thiD thiM thiE [COG0351 COG2145 COG0352]
12 Oceanobacillus iheyensis B/C NC_004193.1 - 504853 505142 OB0476 OB0475 OB0474 OB0473 OB0472 [COG4732 COG0819 COG0351 COG2145 COG0352]
13 Bacillus halodurans B/C NC_002570.1 + 1519479 1519729 BH1431 BH1432 BH1433 BH1434 BH1435 [COG0352 COG2104 COG2022 COG0665 COG0351]
14 Bacillus halodurans B/C NC_002570.1 + 2025463 2025806 thiC [COG0422]
15 Deinococcus radiodurans chromosome 2 T/D NC_001264.1 - 178066 178520 DRA0175 DRA0174 DRA0173 DRA0172 DRA0171 [COG0422 COG0352 COG2104 COG2022 COG0351]
16 Staphylococcus aureus subsp. aureus N315 B/C NC_002745.1 - 2149949 2150334 SA1897 thiD thiM thiE [COG0819 COG0351 COG2145 COG0352]
17 Bacillus subtilis B/C NC_000964.1 - 1391108 1391417 ykoF ykoE ykoD [- - COG1122]
18 Bacillus subtilis B/C NC_000964.1 + 1606750 1606950 ylmB [COG0624]

0  ________________________________________________________________________________
1  ACTTGACACAATTGCCAGTTTCATTTTATAATAAAAA-------------------------------------------
2  CAATCCTTAAAATCAAGGACAAGTAATATTATATCCATAGAACTATAAAAAAGCAATACCTTTTTAAAACTTTTTTTATT
3  TTGCGTCATCCATCCCCTGTTTGCTGAACGATAGCTAAGCGAGCCGGGTGGTGACAAGTAGGACGGCAAAAAAAAGCCAC
4  ACTATAAAAAATTTATGGGTAAAAATCAGTACGCATCTAAAATAGATACTTAATTTAAAATATAACTAGAATTTATTAGA
5  TAAAAAATGTTTTTTGAGTTATGATAAATAAAACA---------------------------------------------
6  ATGGTTCTCTGGACTGAGATCGGAAAAATCCATAGGAAGCACGAGTGGATTCATGGTATACGGCTAATAAGTAGCCGCTT
7  GAGGTTAGCATCATGGCTAATCTTTTTTTATAGTTTACATCTTACCAGGAAAAACTCTAGGTCAATAATTTAAAACCCCT
8  ATTCAAAAAGTAAATCTTATGGAACTTAATACCTTAAGATTTACTTTTTCTCATGTATGTACTATAATG-----------
9  GTATCCCTCTTTTACCCTACAAACTATAATTCGTAAGCCATTATGCACGGGTTCTTCACTGTTGTTAAAGAGGTATGATT
10  GACAAAACTCCCTCGCGGCGCTGCCGCATTGCACTAAGAAAATGGGAGTGAGCGTCGCACAGGTGAAACGGTGCGGGGTT
11  AAAATATCCTCCTAAGCTTCATCATATATTTAAGATTATAATCCTTAAATTAAAAAAATTCAAAAAAGGTATGTTGAAAA
12  CTATCTCAGTCCCCTTTGAATCCCAATTTTATGTATTCAGATGACAGAATTTATTTATTTTGTTACAGTTAATATGAAGT
13  CCATCTTTGCAACGAGATCAGAATATGTCATAATAAAAAGAGAAT-----------------------------------
14  CAATGCGCCCTAATGGGTCTATTTTCCTAAAAAGACAACAATGCCTTTCCCTTTTCGCTCAGTTTCTTTATAATGAA---
15  GGGTAAGGGGGGGATATGTCTGTATGTGAAGGGACAACAGGGAGATCTTCATATAAAAAACTTTTTAGACTGTTTGGCAC
16  GCCATTTATGCATAGCTAATCAATAGTTATATAAGTAACTTTTAGATCGGAATATATCGGGGAATTCTCGATATGTTCCG
17  ATTTGACCATCCTCTCCCGTCCCTATATGAAAAAAATGATTTCGTTGTTTACAAAATGATTCTTATCATCTATTATGATG
18  CA------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  TCGTCGTTTGTTTTTATAAAATAAATGCTAAGAAACGTTGATATGATTGCAAAACGAGTTGCTATTTTAAATTAGTCTCA
3  CGAAGATCGGCGGCAGGGAGAGAGAGCTGGTTTCTTGTTGTAATGCGGGCAAGCTAGTGCTATGGCGTGCCGTGCAAATG
4  GAAAATATATATAA------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  GGCTACACAAAAAATCGCCTTCTTTCGTTTGAATTTTGGTAGTGGTACCTTCATTTTAAACAATCGGGCGACTTTTTTTG
7  TATCCTTGACAAGGAGATTATCTCATC-----------------------------------------------------
8  --------------------------------------------------------------------------------
9  GATAAGTATCCCTCTTCATTTATCAGCTCAATCTTATTACATGTCACATATTTTTATATCTTTAATTACTAACATTCCTA
10  GCGCCAAGTCAAGGCACGTCGCCTCGGTGCACCAAAGGGCACATTGCAGCGCGGTCAGGTCAGAAGTGACCCGGCGTCGC
11  AGAAAAGGAGCTATGGTATCATTTGGATTAGA------------------------------------------------
12  AAATAA--------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------
15  TTGTCTTGCTGTCGGGCTTGACCTGTCCCTGACGCGGTGGC---------------------------------------
16  GTCTTTTTTATTTCGCAAATATACGTCATTATAGAATTATTATTTAAAGATAATAATACAACTGAGCAACAATAATTGAA
17  TTAAAATAAAA---------------------------------------------------------------------
18  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  GTTTGAAAATCTACATTTGTGCGTGTATTTAAGTTTTTTTAAGGGATCATGTCATTCGGATATCACCAAGTCATTATTAT
3  CCGGTGGATGCCGACGATTGCGTGTTGCATTGCAGGATGCGCGTCGCTTGTCGGCCGTGGCATGAACGCGGCGGCTTTGC
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  TATGTTCTTTCGCGCGTTAAATGGGGTCGAACGAGCGACAGGCGGCGACTCCTGCGGGAAAAGCAACAGCGGAAGATCGC
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  CTACATCTTCAATTTAAATCCAATGCTAATATTATAAATTTTAAATCGAATTAAACGAAATTTCATGAAGACAACCTATT
10  GGGTGGCATCGGGGTTTTTACCTTGGCACCGTTTGCCAGCCTGTGC----------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------
16  AATGTTGAAACCGTTTGCTAAGATTAATTTGCAA----------------------------------------------
17  --------------------------------------------------------------------------------
18  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  AATCCAAACTTTTTAAAACAATCATTACTTAGCATCGATGAAAATTGACTCATATGAATAATTTTACTTTTACGAAAAAA
3  GAGAGACACGCAGCGTTCCAGCTGCGTCATGCGGCCCGTCCGATCAGAAGCGCTGGGTGTAGTGGGGCAGCGTTAACGGC
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  CGAGAGTGGGGTTCTCGAGGAAGCTGGAGCGTTGCCCGCGGAAAGCGTCCGCCAAGTCGCGATTTAGAACAAATCAGAAA
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  GACATAAGTTTACAAACGTCTTACAGTATAAT------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------
16  --------------------------------------------------------------------------------
17  --------------------------------------------------------------------------------
18  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  TCAACTAAGATGTAGGT---------------------------------------------------------------
3  CGGGAAGGCGGACGCCGAGTCGAGCGAGTTGGCAACGGCGCTGAGCACCGCCGGCGAGTCGCGATCGAACAGGTTGTTGA
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  AGCTGCATCAAAAGATAGACTTTTGATGCAGCTCCTTTTCATTTCAAATGGTTGGAGACGTCGACAAGGAAAGAAAAAAC
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------
16  --------------------------------------------------------------------------------
17  --------------------------------------------------------------------------------
18  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  CGTCCACGCCCGCGGTGGTGTTCCACGGCACTGGCAGGACCTGCATGGCATTGAAGCTGATGGGGCGACGTGGTGATAGT
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  AATACCATTCCGACTCAACTTATGCTAGGATAAATGAGAAA---------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------
16  --------------------------------------------------------------------------------
17  --------------------------------------------------------------------------------
18  --------------------------------------------------------------------------------

  
0  _____________________________________________________________GTGCGAAATCAATAG___T
1  -------------------------------------------------------------TAAATAAGTAAATA----T
2  -------------------------------------------------------------AGAATAAAAAAAAAT---C
3  TGCCGGTGTCATCCAGCAGCAGAGCCGCGCGTGATGATCGCCGCAGACACATGTCGCCCGCGCGGCGATGTGGTTT---A
4  -------------------------------------------------------------TAATTATAGACTTTA---T
5  -------------------------------------------------------------AATAATTTTAAGATA---T
6  -------------------------------------------------------------ATAAAACATGTATAA---C
7  -------------------------------------------------------------ATATAATGAAAGCAC---T
8  -------------------------------------------------------------AAATAAAAAATATAT---G
9  -------------------------------------------------------------TAATTAAATAAATCG---C
10  -------------------------------------------------------------TTAAATTCAGGCTCG---T
11  -------------------------------------------------------------AAATAGCATAAAAAA---T
12  -------------------------------------------------------------ATACGAAA--AGCAA---C
13  -------------------------------------------------------------GAATAATTGCACAGG---A
14  -------------------------------------------------------------ACTCGAACTTAATAGAAAT
15  -------------------------------------------------------------AAACTCGGGGCATCG---T
16  -------------------------------------------------------------TTGAATACTAAGGAA---C
17  -------------------------------------------------------------AATTGTATACGGAAA---G
18  -------------------------------------------------------------AATATATATAGATTC---A

  
0  ___TACTGGGGGTGCC__CGC__T______T_T__CGG_G__CTGAGA__G_A_______GAAG_GC____AAGCT___T
1  ---CACAAGGAGTGCT--AAC--C------T-T--AG-----CTGAGA--T-T-------GCAT-T---------T---G
2  ---CACTAGGGGTGCC--ATT--T------T------G-G--CTGAGA--T-A-------AGAT-GC----AT--T---T
3  ---ATCGCCGCCGAAG--TGG--G------G-G--TAC-C--ACAGCA--C-T-------GCTG-CG----GTTGA---G
4  ---AGCTAGGGGTGCC-------T------T-T----G-G--CTGAGA--G-A-------TAAC-AT----TTCGT---T
5  ---TGCTAGGGGTGCT--G----T------A-A--AAG-G--CTGAGA--G-G-------GATA-AT----AAG-----T
6  ---CACTAGGGGTGTC--GAA--A-------------G-A--CTGAGA--G-A-------GGCG-------AATCC---T
7  ---ATAATATTTCACA--AAG--G------A-G--TGC-T--TTGGCT--G-A-------GATC-GC----AAT-T---G
8  ---TGCTAGGGGTGCC--------------T-T--TAG-G--CTGAGA--A-A-------CA-G-TT----TGTCA---C
9  ACACACTAGGGGTG---------T------T-T--TAT-A--CTGAGA--T-G---------AG-GC----TTGCC---C
10  ---TGGATGAAACAGG--GGT--G------C-C--GTG-C--GGATGG--G-C-------CGCG-CG----GCTGA---G
11  ---AGCTAGGGGGGCC--AGTAGT------G-T--CTG-G--CTGAGA--TTA-------GAAA-TG----AAATT---T
12  ---TACTAGGGGTGCC--CAG--TACTATGT-G--TGG-G--CTGAGA--G---------GAAA-GC----AC-CT---A
13  ---GACTAGGGGTGTC--TGC--T------T-A--AGT-GGACTGAGA--A-A--------AAG-GT----GTGTT---C
14  ---AACTAGGGGAGTC--CAA--T------G-AGCTGG-G--CTGAGA--A-A-------AAAACGCGATGAAGTT---T
15  ---CAACAGGGGTGCCTCCGCA-T------A-T--GGG-C--CGGAGGCTG-A-------GAGG-GC----AA-CTCGGG
16  ---TACTAGGGGAGCC--TAA--T------GAT--ATG-G--CTGAGA--T-G-------AATT-G---------T---T
17  ---CACTAGGGGTGCT---GT--T------T-T----G-G--CTGAGA--T-AAAGCGCGGAAG-AA----ACGCGC--T
18  ---TCCTAGGGGTGCT-------T------T-G--CGAAG--CTGAGA--G-A-------GACT-TT----G-------T

  
0  CTT_A___ACCCTT_TGGACCTGATCTGGTTCGTACCAGCGTGGGGAAG__TAG__AG_G_______AATTGTTTT__TG
1  CAA-A---ATCCTA-TGGACCTGATCTAGTTAATACTAGCGTGGGAATG--TGA--TT-C-------GTTTCATGA--AT
2  CTTGA---TCCCTT-TGAACCTGAACTGGTTAATACCAGCGTAGGAAAG--TGG--AG-T-------TGGCGACTA--TA
3  ATA-G---TCCCTT-CGAACCTGATCCGGCTCATACCGGCGTAGGGAAG--CTT--CG-T-------TAGATGCGC--TG
4  ATT-A---ACCCTT-AAAACCTGATCTGGATAATACCAGCGTAGGAAAGCCTGT--AG-A-------AAGTTTTATAATA
5  CCT-A---ACTCTA-ATAACCTGATTTGGTTAATACCAGCGTAGGGAAG--TAT--AT-----------TTTAAGT--TG
6  C---A---ACTCTT-GGAACCTGATCTAGTTCATACTAGCGAAGGGAAG--TGG--CG-C-------ATTTCGTGA--AA
7  CGA-A---ATCCTG-AGGACCTGATCTTGTTAGTACAAGCGTAGGGATT--GTG--AC-C-------AATAATCAA--TG
8  GTT-A---ACCCTT-A--ACCTGATCTGGATAATACCAGCGTAGGGAAG--CAG--TTTG-------AATT--TTG--AA
9  TCA-A---ACCCTT-TGAACCTGATCTAGCTTGAACTAGCGTAGGAAAG--TGT--TA-C-------TATACATAT--GT
10  AGA-G---TCCCTT-CGCACCCGATCCGGTTCGTACCGGCGTGGG-AAG--TTT--CT-T-------CAGAACACC--GT
11  CTT-G---ACCCTT-TA-ACCTGATCTGGTTAATACCAGCGTAGGGAAG--CCC--AA-G-------AGACAAATA--TA
12  CTT-TCCGACTCTTATGGACCTGATCTGGTTAATACCAGCGTAGGGAAG--TAGTCAA-T-------AATTTTGAT--GA
13  CTT-T---TACCCT-CATACCTGATCTGGATCATGCCAGCGTAGGGAAG--TCG--AC-T-------GCACGTGAC--GA
14  TTA-A---ACCCTC-GGGACCTGATCTGGATCATACCAGCGTGGGGAAG--TTA--TC-A-------TGTTATACC--AC
15  CCT-A---ACCCTA-TGAACCTGAACTGGTTAGCACCAGCGGAGGGAGT--GTG--AC-G-------GGCGCAGAG--AC
16  CAG-A----CCCTT-ATGACCTGATTTGGTTAGTACCAACGTAGGAAAG--TAG--TT-A-------TTGAAGTGA--TG
17  TTG-A---TCCCTT-ATGACCCGATCTGGATAATACCAGCGTGGGGAAG--TGC--AG-GTTGACCGAATGGTGTA--TT
18  CTC-A---ACCCTT-TTGACCTGATCTGGATCATGCCAGCGGAGGGAAG--CGG--TG-A-------AAAGCGGAG--TA

  
0  TTA_TTGT_CT_TGCTGGGCAATA_ATATGTTTCTTTCTGACTGTAACCGGGTTCATT_TATATGAATCCGGTTTTTTGT
1  GAA-CTAA------------------------------------------------------------------------
2  CCT-ATTC-TG-TAGCTGTATATA-AAACCACTCCATTTTGGGGTGGTTTATTTGTTC-TTTATTCTAAATTAATAGGAG
3  CTC-CGTG-CC-TGCACGGGCCTG-CGCCATTGAGCGCCGCCGCTTCGTCCGCACTGC-GACCCCTCGCAGCGCCAGCAC
4  GTA-TTTT-ATATGTTTAG-ATTA-TTATGACTTTTTATAAAT-TAAGC---TACATCCTACATGGATGTAGCTTTTATT
5  TGA-TTTTTCA-TATTAGAAAATA-TTATTATGATTAATTAGAGAATATATTTTTAAA-AGGTTTAGCAATATTGCTAAA
6  ACT-AGTT-TA-CGATAATCAGTC-AATGCGGCATCTCCTTGTGGGTAGGAAGGAGAT-GTTTTTTC-------------
7  ATT-GGAA-AG-CGATACTCTTTT-TGTGCACAAAAGGAGTTTTTT----------------------------------
8  TTACTTGC-TG-TAATTTGCAGTTGATCTGTTTTCTACTGTTGATTACAGCTTTTTAT-TTTTTGTTTACCTTAAATCCA
9  TTT-ACTA-AT-ATATATTGTGAA-CGCATAACTTTCCTATGGATGGTTGTGCGTTTT-TTTATTAGGAGGATGTAAAA-
10  GTA-CTTG-GC-AGCCCGTCCTTC-CGGGCCTCGCCGCTCCCTCCCGGTTTCGTCCAC-AGCCTGCCCCGCCAGGCCACA
11  TT---TAA-AT-TGATTTTAAAGC-ATATATAGCCTTAGGGCTGTATATGCTTTTTCT-TTTTTAGAAGGAGTGAAAAAT
12  TTA-CATT-CT-CAGTATACCAAA-ACCAGGTCCTTTA--ATTGGACCTGGTTT--TT-TGTTTGTTTTAAAAAGGAGAG
13  TCA-TCAT-GG-GTAGCCGGCATC-CTTATGGATGGCTGGCTTTTTTTATTGTATATA-CAAAACAGAGAAAAGAGAGAG
14  ACG-AATG-TA-TTTTATGCTAGG-GTCCGTCTGAATGACGAAAACCCTGGCTTATTT-TATTAAAAAAATACACTCCTA
15  TTT-TGTT-CT-GCCCTCCTCCGT-TTCTTCGTGGGGAGGGCTTTTTTATTGACCGAC-ACTGACTGAGACCGGGCAGGC
16  GGG-CTAG-TA-TAGCAACATTGC-CATCAAACTACTTTCATGTTGGAAGTAGTTTTT-TTATTTAGGGAGGATTTTTTA
17  TTT-TTGT-GC-GCTTAATCGATC-TATGACTGCATATTCCCTTAGGATATGCAGTTT-TTTATTTTACCAAAAAAACAG
18  CAT-CGGA-CT-CCGTTTGTTTTT-ATTAAGCCGTTTCATCACATTTGAAACGGCTTT-TTTGATTTTAAAGAATAGGAG

  
0  GCTGGTTATGGGCTTGATTTTGTCCTTTCAAACGTAGAAAGGGGAAGGAAAAGTA_________________________
1  --------------------------------------------------------------------------------
2  AGGAGAATTT----------------------------------------------------------------------
3  CCTTGGTGCTGGCTTCTCAGCACACAGGACGAACGCCA------------------------------------------
4  TTTTATTAGAAATGTTATAACCAACTATGATTATAAACTAAAAAGTGTATGAAATTTTTAGTTAGAGTTTTATAAAACTT
5  CCTTTTTTTGTTGGTATAAAAGTCTTAAGAATATAGAAAAGAGGTGAAGGG-----------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  CATATAATTTAGGAGGTTTTGTT---------------------------------------------------------
9  --------------------------------------------------------------------------------
10  GAATCAAGGACGAGACC---------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  ATAAA---------------------------------------------------------------------------
13  GAGAAGCAAA----------------------------------------------------------------------
14  TTCCCACCTTTTATGGATTCAGAATCTTGTCCTGACGACTACACACGCGAAGGAGAGATTCC------------------
15  ACCGTGACTTCGCCGCTGCCTTCCCCGACGAACACTACAGCTTGAACCGAACGGACGCCCGACCAGGCGCGCTGCTGGCC
16  CA------------------------------------------------------------------------------
17  GAGGTCGGAGAA--------------------------------------------------------------------
18  CGGATTTACA----------------------------------------------------------------------

  
0  ___________________________________________________________
1  -----------------------------------------------------------
2  -----------------------------------------------------------
3  -----------------------------------------------------------
4  TGAGGTAATTCTTATTTGGGCTATTAGGTTTAATCATAAGATTAAAGGAGATATAGAAT
5  -----------------------------------------------------------
6  -----------------------------------------------------------
7  -----------------------------------------------------------
8  -----------------------------------------------------------
9  -----------------------------------------------------------
10  -----------------------------------------------------------
11  -----------------------------------------------------------
12  -----------------------------------------------------------
13  -----------------------------------------------------------
14  -----------------------------------------------------------
15  TCTCTTTGGCCTGACGGCGCGCTCCGCCCTCATCTGTTGCCCGGAGGCCTCT-------
16  -----------------------------------------------------------
17  -----------------------------------------------------------
18  -----------------------------------------------------------