BLISSBreaker Lab Intergenic Sequence ServerHome

Intergenic view options: Interleaved

NC_000964.1 Bacillus subtilis (- 4029338 to 4029498) circular

Term (100.00)%  ------------GGCCTATGCGGCC-------------------------------------------------------
Islands  ,,,,.G.,,,,,GGCC.A.GCGGCC.......G....AGG.CAA..GAC.C.CGC.AA.CC..,,,,.AAGA.,,,....
5'-   AAAATGTAAAAAGGCCTATGCGGCCTTTTTTTGTTTTAGGTCAATTGACTCTCGCTAATCCTTAAAATAAGATAAATTTT
          |         |         |         |         |         |         |         | 
          4029490   4029480   4029470   4029460   4029450   4029440   4029430   40
          |         |         |         |         |         |         |         | 
3'-   TTTTACATTTTTCCGGATACGCCGGAAAAAAACAAAATCCAGTTAACTGAGAGCGATTAGGAATTTTATTCTATTTAAAA
Islands  ....ACA.....CCGGA.ACGCCGG,,,,,,,C,,,,.CCAG..AAC.GAGAGCGA..AGGAA....A..C.A...,,,,
Term (95.93)%  ------------CCGGATACGCCGG-------------------------------------------------------

  
Islands  C.AG,,,,,.A..G.AA.GA.A...CAG.C.AG..AAGA..A..GAG.,,,.A..AC....A..AC,,,,GGAGAGAGGA
5'-   CTAGAAAAATATTGTAATGATATTTCAGTCTAGTTAAGATTATTGAGTAAATATTACTTTTATTACAAAAGGAGAGAGGA
          |         |         |         |         |         |         |         | 
  29420   4029410   4029400   4029390   4029380   4029370   4029360   4029350   40
          |         |         |         |         |         |         |         | 
3'-   GATCTTTTTATAACATTACTATAAAGTCAGATCAATTCTAATAACTCATTTATAATGAAAATAATGTTTTCCTCTCTCCT
Islands  GA.C.....A.AACA..AC.A.,,,G.CAGA.CAA..C.AA.AAC.CA...A.AA.G,,,,.AA.G....CC.C.C.CC.

  
Islands  A
5'-   A
   
  29340   
   
3'-   T
Islands  .

IGR  -   4029338  4029498  ()  12  wapA

Blast Hits

ID Organism Class Accession Start End Operon
0 Bacillus subtilis B/C NC_000964.1 - 4029338 4029498 wapA [COG3209]
1 Streptococcus agalactiae B/C NC_004116.1 - 2005295 2005812 SAG2028 [-]
2 Listeria innocua Clip11262 B/C NC_003212.1 + 687799 687988 lin0657 [-]
3 Streptococcus agalactiae B/C NC_004116.1 + 366630 367098 SAG0355 [-]
4 Vibrio cholerae chromosome I, complete chromosome P-g NC_002505.1 - 2610319 2610549 VC2435 VC2434 VC2433 VC2432 [COG0494 COG3151 COG1409 COG3150]
5 Staphylococcus aureus subsp. aureus N315 B/C NC_002745.1 + 590551 590766 tufA [COG0050]
6 Sulfolobus tokodaii A NC_003106.1 + 2124470 2124648 ST2117 [-]
7 Sulfolobus tokodaii A NC_003106.1 - 978353 979110 ST0999 [COG1917]
8 Methanococcus jannaschii A NC_000909.1 + 493984 494042 MJ0559 [COG0496]
9 Streptococcus mutans UA159 B/C NC_004350.1 - 1746754 1746922 comEB [COG2131]
10 Pasteurella multocida P-g NC_002663.1 - 1316664 1316698 argE [COG0624]
11 Bacillus halodurans B/C NC_002570.1 - 1097892 1098090 BH1016 [COG0747]

0  ________________________________________________________________________________
1  TATTATTGTGTAAAGGATAATAGGCTGTGATTGTCTAAACTCAATTACCATTCATAAAGATTTTCAAGAAAAATAATAAA
2  CATAATGAAAACTCCTTTTTAATTTATTTTTAAGTATAATAGCAAAAATACCTA--------------------------
3  TAGAAAAAGGCTGAGTTATTTACTCAGCCTATATTTAGTTTTTCAAGGTATTATCATAGTTATAGTTTCATATTTTGTTA
4  CGGTCCTATTCCTGACGTGATGTGAAAGGATTTATTCCTCAAGAGTTTAACTCAAATTGATGGTAATTCACTC-------
5  TATAACTTGTTTTGACTAGCTAGCCTAGGTTAAAATACAAGGTGAGCT--------------------------------
6  AATATTTTGATAAGGATTA-------------------------------------------------------------
7  GTAATATAGTAATCTAAATCTCAAATTTATACCTTTTGCGTATATCGAGATTATCAGTGTTGATTAGAAACTGCACTTCA
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  CTTGTTTCAACTCCCTTCTTCCTACTATAACCATATGCAAAGGAGAGCTCGTTTCCTGCAAACAAACGATGTATAAGCGC

  
0  ________________________________________________________________________________
1  TAATTTTGGGGACAAATGATGGGACAAATCCTCTTCTGTCAAGCAAAAAAGCCTTTAAATAAAGGCTTTTTCTTATGTAG
2  --------------------------------------------------------------------------------
3  TAATTGATAAAAAGGAGATATATCAATGACACTAGCATTAGCCAATTTTTAGATTGTAGTCTAATCCAAAATTTTCAGAA
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  TGAACAAGTTTAACAAGAAATTATTATAAGATTCACTCGTTTCTTTACTTACTAGAAATAATTGTTCAATTTCACAATAC
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  AGCATAAA------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  TTTAATGCCCCTACAAAGTAACTATATGTATTTAAAGTTAA---------------------------------------
2  --------------------------------------------------------------------------------
3  AGAGTCATT-----------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  TAAAATTGAGATAAACCTATGAAAACAGAACCGAAGAAGTATCTGAATAGTTTGCTTTATTGAAATAAAAACAATGGAAA
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  AACTTAAGAGTTTTGGGCTATTCCAAATGAAATTTCCTTTTGGTTAAAAGGAAGGGAGCGTATTACTTTCAATTTTTAGT
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  GAGAGCAATAAAACCTTTATTTCAAGTGTAGTTTACGTCTTTTCATTCTCTTTCTAAAGCTCCAAGTAATATTTTGTTCA
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  GTTAACTCCGACTTAACTTGTCACTTTGACGGGTTTTTTATTTAACGCAAAACTTTAACTGGAAAGACGTAAAAACCTTT
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  ACCCCAAATAGATTAAGGGAGACTTATACTTCAACTGGAGAACAAATAACAAGAGAGATTATTTGAAAAAGATGGAGAAA
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------

  
0  _______________________________AAAATGTAAAAAGGCCTATGCGGCCTTTTTTTGTTTTAGGTCAATTGAC
1  -------------------------------TGTATAAAAAAAGAAAACAAGTAATATCAAGGAATTTATCACTTTTTGT
2  -------------------------------CTTTTAAAATAGCATACTTTTAGGCACTAATACAGCAATATGGAGCGGG
3  -------------------------------TCGAACACTTTATTCTAAGTACCATTATTTAGGCTCTCCTTAACTTGAG
4  -------------------------------GAAACTTTGCACTTTTTTACACTTAACTATCCAACTGTGCAATAAAAAT
5  -------------------------------TAAATGTAAGCTATCATCTTTATAGTTTGATTTTTTGGGGTGAATGCAT
6  -------------------------------ATCGGTTAAATTATTTATTCAAGATACTAAGATTTTAATACAAGCCATA
7  CAAAAGAAAATATGAGATAATGACTATAAGTGAAGACATATTCAATTTTACTCTTCTTTTCATAGTTTAATCCCTAAAAT
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  -------------------------------------------------------------------------------A
11  -------------------------------TTTTCTTAATATTATTTACAAATCGAAATATTTATAGTATTTTTATAAT

  
0  TCTCGCT_AATCCTTAAAATAAGATAAATT__TTCTAGAA_AAA_TAT_T_GTAA__TGATATT_TC___AG___TCTA_
1  TTATAAA-AATTAATAAAGAAAGATAAATT--TTCTAGAACAAA-TCT-A-GAAC--AAAAATA------AG---T-TA-
2  ATAAAAA-AATGTTTAAAATAGGATTAATT--TTCTAGCA-ATA-GGG-G-AAAA--GTAACGT-TA---TA---TGAT-
3  ACTCT----ATCTGTTATTGAAGAGAAATT--TTCTAGAA-AAAATAGCT-ATTA--TTAGATT-TT---AGAAGGCTAT
4  TATGAGC-CACTTAAAAAATAAGATAATTT--TTATATAA-AAA-GTT-GAGCCA--TCACTTG-GT---AG---TC---
5  TATAAAAGAATTGTAAAATTCTTTTTGCAT--CGCTATAA-ATA-ATT-T-CTCA--TGATGGT-GAGAAAC---TATC-
6  TTAGACT-AATCA--AAATTATTATAAATT--TGCTAGAA-AAA-TAT-G-ATAAATTTATATA-T----AG---TATA-
7  TTAAGGT-AAGAAGAGTCTAGAGATAGCTTGATGAGAGAA-AAA-TAT-T-GTAAC-TGATATT-T---------TCTC-
8  ---------------------------------------------------------TTTTACC-CC---CC---AAAA-
9  -------------------ATAGAAAAATA--TTGTAATA-AAA-CCT-T-GCTT--TACCATGGTC---AG---TAAA-
10  TTGTGTT-GTGCCTTATAATAAGATAAATT--TTTAA-------------------------------------------
11  TGTTTCG-TCCTTTTGGCTAACAAGCCCTT--TTCTAGAA-AAA-TAT-T-TTAA--AAAAGGA-GG---AA---GGC--

  
0  GTTA_AGATTATT____GAGTAAA_TA_TTACTTTTA_T_TACAAAAGGAGAGAGGAA______________________
1  TTGA-AGAA-ATA----CA--AGA-TA-TACCTTTTT-T-AGAGTACTCAAATGTATTTGAATATTACATAAAAGATGAA
2  ATGA-ATAATTTG----GAGGTGG-CG-CAT-------------------------------------------------
3  GAAA-AGATTGGT----TTTTAAA-GA-GTTCCATTA----AGTGATGAAGAAAGTAAAGCTTGGTTAGTTATAATTGCG
4  GGCA-AATTCCAC----GAGTAAACTA-TAAAGTTCA-T---CAATAGGAGGTACGA-----------------------
5  ATGAGAGATAAAT----T--TAAA-TA-TTATTTTTAAT-TAGAATAGGAGAGATTTTATA-------------------
6  -TTA-GAAATATG----GCATAAC--A-TT--TTTAA-GGTATAAAAAGAAAAAGCACATA-------------------
7  TTCA-ATTTTTTT-----ATCATA-TGCTTAACTTTA-A-AAGAGATAAAATGTAACATAACCC----------------
8  GTTT-TAATTACTTTAAGAGTAAA-TA-TTATTTTTA-T-AGTATTTAA-------------------------------
9  GTCG-TGATTGCA----GTGTCTT-AA-CTAATTTTT-T-TCTATTTAATAAGTTAATAAGTTGTAAATTGGTGAAAATC
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  TATATTAATCTTAGTTGATTTTCAAAATTAAAAAAATCTCCAAAAATTTATTTTTAAATATATTTTTAGTTGTTATATAA
2  --------------------------------------------------------------------------------
3  ATTAGACCTTGTTTCTAGCAACGAGGCTTCGCTAGAAATACTTTAAAAGAACTTGAAAGTATGTATAGATATATATAATC
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  TTTAAATATTTGAAACAATGGATCAAAAAATGATAATGAGAAAGGAATAAAT----------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------

  
0  ___________________________________________________________
1  AGTAATTTGACTATTGAAATAAAAATATTCAGAGAGAAGTAAAACCAATTCTAAATGAT
2  -----------------------------------------------------------
3  GTGAAAACTTAACTATTGTTTACATGGAGAAAAAGA-----------------------
4  -----------------------------------------------------------
5  -----------------------------------------------------------
6  -----------------------------------------------------------
7  -----------------------------------------------------------
8  -----------------------------------------------------------
9  -----------------------------------------------------------
10  -----------------------------------------------------------
11  -----------------------------------------------------------