BLISSBreaker Lab Intergenic Sequence ServerHome

Intergenic view options: Interleaved

NC_000964.1 Bacillus subtilis (- 3185635 to 3185832) circular

Islands  AC.GACCC.C....CC...AG,,,,..,,,..CG..AAG..A...C...A.G..C...A.C..AACG,,,CA.GAGG,,,
5'-   ACTGACCCTCTTTTCCTTTAGAAAATTAAATTCGTTAAGTTATTTCTTTATGTTCTTTATCTTAACGAAACATGAGGAAA
    |         |         |         |         |         |         |         |       
    3185830   3185820   3185810   3185800   3185790   3185780   3185770   3185760 
    |         |         |         |         |         |         |         |       
3'-   TGACTGGGAGAAAAGGAAATCTTTTAATTTAAGCAATTCAATAAAGAAATACAAGAAATAGAATTGCTTTGTACTCCTTT
Islands  .GAC.GGGAG,,,,GG,,,.C....AA...AAGCAA..CAA.,,,G,,,.ACAAG,,,.AGAA..GC...G.AC.CC...

  
Islands  ,G.C,,,,,G,,,,,.C,,,,.GGGAC...GACAG...,,,,,CCA.A.G..AGA..AAGG..G..,,,,,CA..,,,..
5'-   AGTCAAAAAGAAAAATCAAAATGGGACTTTGACAGTTTAAAAACCATATGTTAGATTAAGGTTGTTAAAAACATTAAATT
    |         |         |         |         |         |         |         |       
    3185750   3185740   3185730   3185720   3185710   3185700   3185690   3185680 
    |         |         |         |         |         |         |         |       
3'-   TCAGTTTTTCTTTTTAGTTTTACCCTGAAACTGTCAAATTTTTGGTATACAATCTAATTCCAACAATTTTTGTAATTTAA
Islands  .CAG.....C.....AG....ACCC.G,,,C.G.C,,,.....GG.A.ACAA.C.AA..CCAACAA.....G.AA...,,

  
Islands  ...A...AAC,,,C...A...ACG.CAAGGAGGC..A.
5'-   TTTATTTAACAAACTTTATTTACGTCAAGGAGGCTTAT
    |         |         |         |     
    3185670   3185660   3185650   3185640   
    |         |         |         |     
3'-   AAATAAATTGTTTGAAATAAATGCAGTTCCTCCGAATA
Islands  ,,,.,,,..G...G,,,.,,,.GCAG..CC.CCGAA.A

IGR  -   3185635  3185832  ()  12  gbsA gbsB

Blast Hits

ID Organism Class Accession Start End Operon
0 Bacillus subtilis B/C NC_000964.1 - 3185635 3185832 gbsA gbsB [COG1012 COG1454]
1 Oceanobacillus iheyensis B/C NC_004193.1 - 543702 543858 OB0508 [-]
2 Leptospira interrogans serovar lai str. 56601 chromosome I Sp NC_004342.1 - 2503813 2504516 LA2526 [COG0596]
3 Haemophilus influenzae Rd P-g NC_000907.1 + 164460 164622 HI0148 [COG3055]
4 Staphylococcus epidermidis ATCC 12228 B/C NC_004461.1 + 2217299 2217767 SE2167 [COG1510]
5 Streptococcus pyogenes B/C NC_002737.1 - 360121 360798 SPy0433 [-]
6 Clostridium perfringens B/C NC_003366.1 + 2384329 2384712 CPE2079 [-]
7 Wigglesworthia brevipalpis P-g NC_004344.1 - 297828 298062 Wbr0291 [-]
8 Streptococcus mutans UA159 B/C NC_004350.1 - 1605788 1606604 dltA dltB dltC dltD [COG1020 COG1696 COG0236 COG3966]
9 Chlamydophila pneumoniae CWL029 P/C/V NC_000922.1 - 698896 699012 glgC [COG0448]
10 Staphylococcus aureus subsp. aureus N315 B/C NC_002745.1 + 2696563 2696811 SA2407 [COG1510]
11 Clostridium acetobutylicum ATCC824 B/C NC_003030.1 + 3068522 3068712 CAC2937 [COG1893]

0  ________________________________________________________________________________
1  CTCCCTTAGACCTCCTACCAGTTTGTATTCCATTACGTTTATAGTAT---------------------------------
2  TGGATTCCAAAAACAAAAGATCCTTTTAAAAAAGAAACGTTTTTAGTTAAAATCGTTATGAAAGTTGGACGTCTTGT---
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  TACGTTTTCCTCCCTATTAAACCTTTGTTTTTCAAATCCCTTAATATCGTTTACAGATTTATTATATAGCCCATCTAAAC
7  --------------------------------------------------------------------------------
8  AAGAAAAGGATAAAAGAAAGTGAAAGTTTATTTTGTTATGCTACTTTTTCAAGTTTGGTGAAGTTAATAAGTCAGTCAGC
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  ATTCCCTCTCCTTAATATCACTTTGTTATTATTCAAAGCTTATTATAGCATATAATACAAAATATTTTTTTGTATCATAT

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  ATTTTCATAGTGGAGTTTTTTTATATTTATTTGACATTCTCTATTTATAAATTTAATGAAATTATATACTTTATTATCTC
7  --------------------------------------------------------------------------------
8  TTATCCAATTAAATAATAGTCTTGTTTGGAAACAAATTAATCTTTTTATGGCTTTTTTTAAGTAAGGAGAGCGCTAAGCT
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  AAATTTAAAAATATTCTGTAGATATTATTAATAAAAAGTCAATTTT----------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  CCCTAAAACATTTCATACTTTTTCT-------------------------------------------------------
7  --------------------------------------------------------------------------------
8  CATTTAGGTGACGTTGTCATCTTAGTAGACCTATCCGTCTACAAAATAAAAGCGATGGGAATACTGACCAGTTGCTGCTG
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  TGTCACAGTATCAATACCTTTGGTAACAATACTGGCAAATTAGAGATTACAAGTTTCGATTTTAGCAATAAAATGACGGA
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  GTCGGTTGCTCGCGTGCTGATCCTCTAAAGCTAACTGGCAAAAAAAGTCAATCAATAGATGCAATAGGCTTCTAAACAAA
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  TCTAAGAAAAAGCTTGAAAGTTGCTTTTAGAAAGAGCTATTTCAAGCTTTTTCTTTTTAAATTGTGATTAGAAAAAATAA
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------

  
0  ___________________________________________________________________________ACTGA
1  ---------------------------------------------------------------------------CATAT
2  ---------------------------------------------------------------------------TTCGT
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  ---------------------------------------------------------------------------AATAA
7  --------------------------------------------------------------------------------
8  AAGAATAGACAGTGTATTGAGAGATAATTATTAGAGCAGAGCGAACTGCTATTTAACAATTTTTTGTCAAAAAAACAATA
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  ---------------------------------------------------------------------------ACTTA

  
0  CCCTCTTTTCCTTTAGAAAATTAAATTCGT_TAAGTTATTTCTTTATG__TTCT______TTATCTTAACGA__AACATG
1  ATGCTTTTTCCTTTAGAAAATTC--TTTGA-TAGATT--TTCTTTGTTA-TTAC------ATACAATAATGGTGTACATT
2  GGATTTTAGAAAGTTATTTTATTCGGTTAA-TTAATAGAGTGTCTAAA--ATTC------TACTTCTAAATG--GAGATA
3  --------------------------------------------------------------------------------
4  -------CAAACGACCTCCGTTAAGTTTGT-TAAATTTTTATTTAACGAATTTTACAGAGTTATGTTATCAT--AAT-TG
5  --------------------------------------------------------------------------------
6  ATACCTTTTCATTAAAAATATTA--TTACT-TTTTTTATTGCTTCAAT--TGAA------AAGTATCAAATT--TATATG
7  --------------------------------------------------------------------------------
8  AATTTCCTATCTTTATAGCATATTTTTGATATAATGGACTTTGTTAT---TGAA------TTATTTTAAGGT--ATATTT
9  --------------------------------------------------------------------------------
10  ----------------TCAACAACCTCCGT-TAAGTT---TGTTAAAT--TT--------TTAT-TTAACGA--ATTTT-
11  ATTTCTGTAATATATTAAAATTAAAATCAT-TAAGTTATTTTTATATA--AGGA------GTGTATGTT-----------

  
0  AGGAA___AAGTCAAAAAGAAAAATCAAAATG_G__GACTTTGA_CAGTTTAAAAACCATATGTT____AG_ATTAAGGT
1  ATCAA---TAGCAGTAATGATATATAAAGGAT-G--AAAACAT-------------------------------------
2  GTTTA---AAAGTTTGTACTGTCTCTATTACT-A--ATTCTATA-AAATTGAGTATCGTAAATTT----TT-ATTAAGGT
3  --------------------------------------------------------------TAA----AA-AGTGCGGT
4  ATGAA---AAAGTGTCAATTTCTTTAAAAATG-TTTGTATTTTA-CAATCGAACTTATCTATGTTTAAGAA-ATAATTTT
5  ------------------------------------AAAAACCT-TCCTTTTTTAATTACATGTG----CT-ATAAA---
6  CCAAT---AA---AAAAATATATGTTAAATTT-A--AAATATGAACATTTTTTAAACAA-ATGTT----ATTATTTACTT
7  --------------------------------------------------------------------------------
8  AAATA---AAGT-----ATGGCAATCTGAATGAG--GA----GG-CTGTTTGATAAAT-TAAGAT----GA-AAAAACGA
9  ------------------------------------------------------------TTTCT----AG-AACATATT
10  ACAAACTTATGTTAGCATAGAAATGAAAAATG---------TGT-CAATTTACAAAACAACTCAA----GA-ATTAAGTT
11  --------------------------------------------------------------------------------

  
0  T__GTTAAAAACA_TTAAATT__TTTATTTAAC_AAA___CTTTATTTACG_TCAAGGAGGCTTAT______________
1  --------------------------------------------------------------------------------
2  T--GTTAAAAA-A-TTAATCC--GCCATCGATT-TCC---GTTGTATGGAA-ACTGTCGATTGAAGTAGTTTTGTTAAAC
3  T--G--AAAAACA-TTAAATT--TTT--TAACC-GCA---CTTTCATCGTT-TTCGTAAGTTACATCTGCCGTATCTTAC
4  T--GTTCAGAAAA-TTACTTTTCTTTTTTTCAT-AAAAGGCTTTATAATAT-TCTTCGTGTGTATTTATTAGAAATGGGA
5  T--TATAAAAACA-CTAGATT--ATTATATAAT-AAA---TTTTATTTTTG-TAAATAGTTTTCGATAGATTGTTTTTAT
6  ATAGTAATATTTC-TTAAATT--TCTATATAAC-AAA---CTTTTTAAAAAATTAAGGAGTGATTTAA------------
7  -----------AT-ATAAATT--TTTATTTAAA-ATA---TTTTATTTAAA-AAAAAGATTTTAATATATTACATAATAA
8  A--GA-ACAATCT-ATAAATT--TTTATT--AC-AAA---CTTTATTTTAT-TCCGTTATATTTTTAATTTTACTCTATT
9  T--ATTAAAAAGAATTTAATT-----ATTTAAC-AAA---ATTTATTTGTT-TTGTTGTGTTGGCCTTTTTATTTGTTTC
10  T--TGTAAGTTCG-TTAGATT--TTTATTTAACGAAA---CATTTAACTTT-AATGCTTTAAATATTTTTAATGTCTTTT
11  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  TCCACTATAGAATTTTTCAACAATTCTATTATAATAAGTCTTGTTTTAGCGTAAAATCCTGGGTAATTTGCTGCATGTTT
3  AATACAAAAGGGTGCAATAACTGCACTTTATCAACGCCTATTCAATGCCGTTTAATGAATAGAAAACTGTAAACACAACT
4  CATATAGCATAGGTTTTTATAGCCATTTATAGATTGCAGCCATTGAATTTAGTCAAAAGTAGTATAGACATTAACAATTC
5  GAGAAAATTAAAAATATAAAATATATCTTTAGCAAGGTAGTTATTCTTGAAAATTTGAGAATATATTGTTAAAGACATCA
6  --------------------------------------------------------------------------------
7  TAAATTTTTATTTTTCTAAAACTCTAAAAAATATTAGATACTATAATTTTATATATTAAAAAATTGAATAATAAAAATTT
8  TCTTTAGTTACCTTGGTCAAGGTCAGGGAGAATTTATCTACAACGAATTTTAGGAAGTAACA------------------
9  TAATTTAAAATTAAATTAGAACAGGCGAATACAA----------------------------------------------
10  TTTAGAAAAGGTTTTATAATGTATTAGTATTTATTTTAACGTGAACAAAATGATGTACGGAGGTGCA-------------
11  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  CAGTTCTAAGTATTATATAGGAACCAGTAAAAAACGTTTTTATCTCACAGTGAATTGTATTTATCCAACTTAAAAATGAA
3  CAAA----------------------------------------------------------------------------
4  AAATCAATAACTAACATTTGATTATGAAATTTCAATGTAATTATGCTTTATATTCATGAACGAGTTACAACTCAAAGTAA
5  AAAAACAGTACCTATCAAGATACAGTCGTATTTCTTTAAATTATGCTAAAAATTGCAGATGATAAACATTTATTAAGCTA
6  --------------------------------------------------------------------------------
7  TTTATGATAAAATAAAAATAATAATTTAAATTTAAATTATTATTTTTATTTTTGAAAAACGGTTACATATAATATATTGA
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  ATACTAATTTTTATATAGAATTCTCGTTTCATAAATTTTATCCAATTCAAAATTCATTTTATAGAAATTCTTATAATTTA
3  --------------------------------------------------------------------------------
4  TAGATGTATCCTTTACAGGCAAATCATCATAAAAATCATAGTATCTGGTGCGTCCCACCTAAGCTAAATAATGGATTAAA
5  TTCGAAGTTAATCGAAAAGAATGCCTAATATCGTTGTTCTATTTCATAATATTGATAAATAACGTATCACGATACGAGAT
6  --------------------------------------------------------------------------------
7  ATATGGAGTAGCCG------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  TTTTGACAATAGATTTTGAAACTTCAAAGTAGTTTCTCACTAAACGCTTTTTGAAAGTCAGACTACTGAGAATTGCATAA
3  --------------------------------------------------------------------------------
4  ATGGAGGTGCA---------------------------------------------------------------------
5  ATCAGGTAAGTTAGGTTACTCAAGAAACATCGTTTTCAACTGACATAAAACAACTTTAAAAGAGGATAAGCGACCAAAAA
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  TAAGTTGTCGGAAATTTCGCTTCTAAGCGAAGATTTTTGCACTCAAATTTAAGGAATTTTATTATGCAAGTTTTCGGTAA
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  GAGCACTTAACAGAGTGTGCAAATTATTTACATAGAGATAAAGTGTCAAATAGGCTCTTGACTATAGACGATATAAAGAT
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  ATAACCGGGAGTTTTC----------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  ATCTTGAAGTATTAGCATATCCCAATAAAATAGTGAAACATTAAGTGAGTGGCAGCCACTCAGAGAAATCTAGGACTTCT
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  CCGATCGCCTCAGCCAATCAATCCCTATCTTTTTAGCGCAAGAATTGGTATAATAAGCCTTGTCTTAAAAAATGAGCAAA
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------

  
0  _____________
1  -------------
2  -------------
3  -------------
4  -------------
5  AGGAGAGAACGAA
6  -------------
7  -------------
8  -------------
9  -------------
10  -------------
11  -------------

Complementary Intergenic Regions

IGR  +  3185635  3185832  ()  17  yuaC