BLISSBreaker Lab Intergenic Sequence ServerHome

Intergenic view options: Interleaved

NC_000964.1 Bacillus subtilis (+ 3177713 to 3178375) circular

Term (35.14)%  -----------------------------------------------------------------------------CGC
Islands  .GGA.CACAGG..AAG..CACCGCA.CC.GCGGCGACACC.G.G.GACC.GCG.CG.GCAGGCCC.G...GA.GA.ACGC
5'-   TGGATCACAGGTTAAGTTCACCGCATCCTGCGGCGACACCTGTGTGACCTGCGTCGTGCAGGCCCTGTTTGATGATACGC
         |         |         |         |         |         |         |         |  
         3177720   3177730   3177740   3177750   3177760   3177770   3177780   317
         |         |         |         |         |         |         |         |  
3'-   ACCTAGTGTCCAATTCAAGTGGCGTAGGACGCCGCTGTGGACACACTGGACGCAGCACGTCCGGGACAAACTACTATGCG
Islands  ACC.AG.G.CCAA..CAAG.GGCG.AGGACGCCGC.G.GGACACAC.GGACGCAGCACG.CCGGGAC,,,C.AC.A.GCG

  
Term (35.14)%  ACATCGCAGTGCG-------------------------------------------------------------------
Islands  ACA.CGCAG.GCGA.....,,,,,C.GAA..AACAGG.ACG....G.C..G...AG....C,,,GA.CA...CG..AC..
5'-   ACATCGCAGTGCGATTTTTAAAAACTGAATTAACAGGTACGTTTTGTCTTGTTTAGTTTTCAAAGATCATTTCGTTACTT
         |         |         |         |         |         |         |         |  
  7790   3177800   3177810   3177820   3177830   3177840   3177850   3177860   317
         |         |         |         |         |         |         |         |  
3'-   TGTAGCGTCACGCTAAAAATTTTTGACTTAATTGTCCATGCAAAACAGAACAAATCAAAAGTTTCTAGTAAAGCAATGAA
Islands  .G.AGCG.CACGC.,,,,,.....GAC..AA..G.CCA.GC,,,,CAGAAC,,,.C,,,,G...C.AG.,,,GCAA.GAA

  
Islands  C.CAA.GAAGCAGC...AC.AA.A.AACA..CAGC..C......G.CAACAAC......CAAG..G....GAAGCA.C.A
5'-   CTCAATGAAGCAGCTTTACTAATATAACATTCAGCTTCTTTTTTGTCAACAACTTTTTTCAAGTTGTTTTGAAGCATCTA
         |         |         |         |         |         |         |         |  
  7870   3177880   3177890   3177900   3177910   3177920   3177930   3177940   317
         |         |         |         |         |         |         |         |  
3'-   GAGTTACTTCGTCGAAATGATTATATTGTAAGTCGAAGAAAAAACAGTTGTTGAAAAAAGTTCAACAAAACTTCGTAGAT
Islands  GAG..AC..CG.CG,,,.GA..A.A..G.AAG.CGAAG,,,,,,CAG..G..G,,,,,,G..CAAC,,,,C..CG.AGA.

  
Islands  G...G.G.CCGC.G.GCA.CAGCGACG...AA.AA.A.AACACC.G.A...A...A..GCAA.AG......,,,,,,,,.
5'-   GTTTGTGTCCGCTGTGCATCAGCGACGTTTAATAATATAACACCTGTATTTATTTATTGCAATAGTTTTTTAAAAAAAAT
         |         |         |         |         |         |         |         |  
  7950   3177960   3177970   3177980   3177990   3178000   3178010   3178020   317
         |         |         |         |         |         |         |         |  
3'-   CAAACACAGGCGACACGTAGTCGCTGCAAATTATTATATTGTGGACATAAATAAATAACGTTATCAAAAAATTTTTTTTA
Islands  C,,,CACAGGCGACACG.AG.CGC.GC,,,..A..A.A..G.GGACA.,,,.,,,.AACG..A.C,,,,,,........A

  
Islands  C.A.,,,,C,,,.,,,C.A.AA.CC.CGCCA.GA...C.,,,GCG.G.G.A.CA.A.AAG...C..,,,,GAACA.A.AC
5'-   CTATAAAACAAATAAACTATAATCCTCGCCATGATTTCTAAAGCGTGTGTATCATATAAGTTTCTTAAAAGAACATATAC
         |         |         |         |         |         |         |         |  
  8030   3178040   3178050   3178060   3178070   3178080   3178090   3178100   317
         |         |         |         |         |         |         |         |  
3'-   GATATTTTGTTTATTTGATATTAGGAGCGGTACTAAAGATTTCGCACACATAGTATATTCAAAGAATTTTCTTGTATATG
Islands  GA.A....G...A...GA.A..AGGAGCGG.AC.,,,GA...CGCACACA.AG.A.A..C,,,GAA....C..G.A.A.G

  
Islands  A.CAG.CA.G.GA.C..G..G.......CG....C..G.A.AG.AG,,,CGAAC.,,,.AC.GA.GACCACAAGGGGAGC
5'-   ATCAGTCATGTGATCTTGTTGTTTTTTTCGTTTTCTTGTATAGTAGAAACGAACTAAATACTGATGACCACAAGGGGAGC
         |         |         |         |         |         |         |         |  
  8110   3178120   3178130   3178140   3178150   3178160   3178170   3178180   317
         |         |         |         |         |         |         |         |  
3'-   TAGTCAGTACACTAGAACAACAAAAAAAGCAAAAGAACATATCATCTTTGCTTGATTTATGACTACTGGTGTTCCCCTCG
Islands  .AG.CAG.ACAC.AGAACAAC,,,,,,,GC,,,,GAACA.A.CA.C...GC..GA...A.GAC.AC.GG.G..CCCC.CG

  
Islands  A..,,,GC.GAGAG.GAGCGG...CG..C.GACCC...GAACC.G..AG..AACGC.GGCG.AGGGA.G.GGC,,,G.C,
5'-   ATTAAAGCTGAGAGTGAGCGGTTTCGTTCTGACCCTTTGAACCTGTTAGTTAACGCTGGCGTAGGGATGTGGCAAAGTCA
         |         |         |         |         |         |         |         |  
  8190   3178200   3178210   3178220   3178230   3178240   3178250   3178260   317
         |         |         |         |         |         |         |         |  
3'-   TAATTTCGACTCTCACTCGCCAAAGCAAGACTGGGAAACTTGGACAATCAATTGCGACCGCATCCCTACACCGTTTCAGT
Islands  .AA...CGAC.C.CAC.CGCC,,,GCAAGAC.GGG,,,C..GGACAA.CAA..GCGACCGCA.CCC.ACACCG...CAG.

  
Islands  ,,.GAA..GCAGA.CG.,,,GCAG.GCG.GGAAC....C.CA.CC..CCGCG.GC.GC......G..G.CC....GG..G
5'-   AATGAATTGCAGATCGTAAAGCAGTGCGTGGAACTTTTCTCATCCTTCCGCGTGCTGCTTTTTTGTTGTCCTTTTGGTTG
         |         |         |         |         |         |         |         |  
  8270   3178280   3178290   3178300   3178310   3178320   3178330   3178340   317
         |         |         |         |         |         |         |         |  
3'-   TTACTTAACGTCTAGCATTTCGTCACGCACCTTGAAAAGAGTAGGAAGGCGCACGACGAAAAAACAACAGGAAAACCAAC
Islands  ..AC..AACG.C.AGCA...CG.CACGCACC..G,,,,GAG.AGGAAGGCGCACGACG,,,,,,CAACAGG,,,,CCAAC

  
Islands  .C.G.CAA.GGAAGGAGA.AGA.
5'-   TCTGTCAATGGAAGGAGATAGAT
         |         |     
  8350   3178360   3178370   
         |         |     
3'-   AGACAGTTACCTTCCTCTATCTA
Islands  AGACAG..ACC..CC.C.A.C.A

IGR  +  3177713  3178375  ()  17  yuaJ

Blast Hits

ID Organism Class Accession Start End Operon
0 Bacillus subtilis B/C NC_000964.1 + 3177713 3178375 yuaJ [COG3859]
1 Bifidobacterium longum NCC2705 Act NC_004307.1 - 649965 650236 BL0515 [COG2233]
2 Thermosynechococcus elongatus BP-1 Cya NC_004113.1 - 147675 148025 tll0165 [-]
3 Clostridium perfringens B/C NC_003366.1 - 105485 106096 CPE0078 [COG1309]
4 Clostridium perfringens B/C NC_003366.1 + 391243 391400 CPE0308 CPE0309 [COG0249 COG2186]
5 Bifidobacterium longum NCC2705 Act NC_004307.1 - 140910 141344 thiM [COG2145]
6 Clostridium tetani E88 B/C NC_004557.1 + 1294414 1295210 CTC01208 [-]
7 Listeria innocua Clip11262 B/C NC_003212.1 - 1469159 1469405 lin1468 [COG3859]
8 Listeria innocua Clip11262 B/C NC_003212.1 + 354846 355067 lin0340 lin0341 lin0342 lin0343 [COG0819 COG2145 COG0351 COG0352]
9 Oceanobacillus iheyensis B/C NC_004193.1 + 1419414 1419685 OB1371 [COG3859]
10 Rickettsia conorii Malish 7 P-a NC_003103.1 + 622479 623129 RC0638 [COG5430]
11 Listeria monocytogenes strain EGD B/C NC_003210.1 + 340056 340277 lmo0315 lmo0316 lmo0317 lmo0318 [COG0819 COG2145 COG0351 COG0352]
12 Bacillus subtilis B/C NC_000964.1 - 160543 160891 ybaN [COG0726]
13 Listeria monocytogenes strain EGD B/C NC_003210.1 - 1461095 1461342 lmo1429 [COG3859]
14 Bacillus subtilis B/C NC_000964.1 - 634095 634825 ydhU [COG3546]
15 Sinorhizobium meliloti plasmid pSymB P-a NC_003078.1 + 1633568 1633943 thiC thiO [COG0422 COG0665]
16 Ureaplasma urealyticum B/C NC_002162.1 + 630674 630812 ABC-2 UU510.1 [COG2274|COG1136 -]

0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  TCATATTCCTCCCTATCTTTTATTAATAAGTATTTTCTGTGCTAAACCTTTACTAATAGCAATACGGCTACCAGTTAGGG
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  ACTTTTTAT-----------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------
16  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  AAACTATTAAAGGACCAAAATCATTTTTAACAATTTCTATATTAGAACCCTTATTTATTCCCATTTCATAAAGTCTTTTA
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------
16  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  GTTATAGTGTCACTTCCTTCTATTATTTCAACAATACCTTTTTCACCTATGTTTAAAAAGGTTAGTGGAATACCTCCCAT
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------
16  --------------------------------------------------------------------------------

  
0  ____TGGATCACAGGTTAAGTTCACCGCATCCTGCGGCGACACCTGTGTGACCTGCGTCGTGCAGGCCCTGTTTGA_TGA
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  -----------------------------------------------------------------------AATTT-AAA
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  AAAAAAACTCCTTCCTTTATTAGCCGACTAATATACTTTCAGCTTCTTTTTGCCTAAGAGTAAGCTTGTACCCTCT-CAC
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  ----ATTTAAATTTTACAAAGGATTTTATTGGATATTGAGAAAATAATCAATGGTTATGTGAGTATATTTATAGAA-ATC
11  --------------------------------------------------------------------------------
12  -------------------------------------------------------------------GTAGTTTGACTGA
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------
16  --------------------------------------------------------------------------------

  
0  _TACGCACATCGCAGTGCGATTTTTAAAAACTGAATTAACAGGT__ACGTTT_TGTCTT__GTTTAGTTTTCAAAGATCA
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  -AGTTTAATCTATACTCATATTACTTATAAAAGAATTG-CTGGTTTATGTTAATATCTTCTGTTTAATTTTCAAAGACCA
4  --------------------------------------------------------------------------------
5  -----------------------------------------------AATGC-ACCTTC--TGGTTTGAACGGTTTGGGG
6  -CAAAATTTCTATAGGATCTCCTAATGGAGCTTTACCTGTTACT--TTAACA-GTTACA--CCAGGAATTAAGCCCATGT
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  -CAACACTTTCGCAGGGGGATTTTTAAAAACTGTCGGATATTAT--AC---T-AGACGA--GATGCATTT--AAAGGTTG
11  --------------------------------------------------------------------------------
12  CTACGCACATCGCTGTGCGATTTATAAAAA-TGAATTAACAGGT--ACGTTT-TGTCTT--GTTTAGTTTTCAAAGATCA
13  --------------------------------------------------------------------------------
14  -----------TTATTGAGCGACTTAACTATCATACTATCATTT--GATGTT-GAAGTC--AAGAAGTTTTTTAATGTTT
15  --------------------------------------------------------------------------------
16  --------------------------------------------------------------------------------

  
0  T__TTCGTT__ACTTCT_CAATGAAGCAGCTTTACT_AATA__TA_AC_______A_T_TCAGCT___TCTTT_TTTGTC
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  T--TTCGTT--G--TCG-CCCTCAAGCGACTTTCTT-AGTT--TA-AC-------A-T--CACTT---TGAAACTTTGTC
4  --------------------------------------------------------------------------------
5  T--CTAATA--ACAACC-GCTTCAGGATAGCCGTAT-ATGG--TG-AC-------A-G-GTCAGG---CGGCA-TTGTCC
6  C--CATTAG--TCTACG-TTTTGAAACATCATTAGA-AATAGATA-AA-------ACT-TTAACTGAATCTCC-TATGGT
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  TGCTGCATTCCACTTTT-CTTCTACG--GGTT--CT-AATA--TA-TCCGCTTTTA-TCTCGGCT---T-TGT-TTTGT-
11  --------------------------------------------------------------------------------
12  T--TAC--T--GCCGCT-TAACGAAGCAGCTTTATT-ACTA--TA-AC-------A-T-TTAGCT---TCTTT-TAAGTC
13  --------------------------------------------------------------------------------
14  T--TTCGAA--TCTTTTTCAATT---CGACTTTTCTTATTA--TACAC-------A-T-TTT--T---AAAAT-CTTGTA
15  --------------------------------------------------------------------------------
16  --------------------------------------------------------------------------------

  
0  AACAACTTTTTTCAAGTTGTT__T__TGAAGCATCTA__GTT____TGTGTC_CGCTGTGCATC___AGCGACGTTTAAT
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  AACAACTTTTTTTCAAAACTT--T--TAATTTGTTTT--GTTGAGTTGTTTG-TG-TGTCTCTC---AGCGACGAGATTT
4  --------------------------------------------------------------------------------
5  GGTATATGTTCCGCGTCTCAC--G--AGCGGCCGTTC--GCA----GCGATT-CCTATATCGCA---ACACCTCCATATT
6  AATATCTTTT---AAATTTTTCAT--TATTGTACCTC--CAT----AC-GTC-TGATATTGATA---ATCG----TTATC
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  AGCATACCGAATAATGAGATT--T--TTTAGTATTTATAGGT----AATATT-TGTGCTACTTCCCTATCG-CTTTTGGT
11  --------------------------------------------------------------------------------
12  AACAACTTTTTTCAAAGTATT--TAATGAAGCTTTTA--GTT----GATGTC-AGCTGTTTATC---AGCGACGAATAAT
13  --------------------------------------------------------------------------------
14  AACACCTTAGGAAAACTT-TT--T--TGTTTT-TCTG--TTT----TGTTTCACGCTGTTCATC---AGCGACGTTTAAT
15  --------------------------------------------------------------------------------
16  --------------------------------------------------------------------------------

  
0  AAT_ATAACA__CCTGTATTTATTTATT_GCAATAGTTTTTTAAAAAAAATCTATAAAACAAAT_AAACTATAATCCTCG
1  --------------------------------------------------------------GT-CTGGCCGCATTGCTT
2  --------------------------------------------------------------------------------
3  ATC-TTACCA--CGTTACATAACTTATT-CTAATTACATAGATGTTTATTTTACATAATTATTG-TTAATATTCTTTATT
4  -----------------------------------------------------------------TAGAAAGCTAAATTT
5  GTT-CCTGTT--GTTTTACCCTTCCCGA-ATTTGTGCCACTGACATCGCGTCAGCGTCACAAAT-TCGGGAGATGTTGCT
6  ATT-ATAAC------GTATTTATT-ATA-ACATAAGTG----AAGATAAAACAAAATACCATTTTAATTTATATT--TAG
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  AATTATAATA--GAT-TCTTTATCTGTTTGTAATTTTTCTACATAAAGAATCTATTTAT--AGC-TAATTTGGGTTATAT
11  --------------------------------------------------------------------------------
12  AAT-ATATCA--CGGATATTATCAAAAG-GTCAACACCCAATTTAGGCTGTATGTGAAGAGACA-TTTTATCGGTTATAT
13  --------------------------------------------------------------------------------
14  AAT-ATACCATGCCTGT-TTTATTTGGT--CAACACTTTTCCTGTATTTTTTTATTTTCTTCTT-TCACGCCTTCCCATG
15  -------------------TCGTGACGG-GTGATTAGATGCAAGGAGCTGCATTTGCAAGCATG-GCGGGAGGACAATCC
16  ---------------------------A-AAGCTCCTTTATATATAAAAATGTAAAATA-ATAT-GTGTTTTAATCCTTA

  
0  CCATGAT____TTCTAAAGCGTGTGTAT___CATATAAGTTT__CTTAAAAGAACATATACATCAGTCATGTGAT__CTT
1  CGATTCC----TTCTCCATTCGTAAAAC---TGTTTGTTATC--TCACATCGGGCAGCTGCCGAAAAGCACGAAT--CTT
2  --------------------------------------------------------------------------------
3  TTTCATT----AAAATACTATATAATTC---TTATATTGATA--CACCTGGTAAAGTTTAAATTGAAATTTCCCT--TAA
4  TTATATA----TTTTAATAACTACTTAT---CATATAAGTTT--TTTAAAATTAAAGTTT-ATAAATTATATCATAATTG
5  CGGCGGA----GGCGTCTATGTATCACG---AATGGACGGGG--ACGCGCCAGACCTGACGACACGTATCGAACA--AAT
6  CCAAAAA----TTAGAA------TTTAA---GATATAAATTTAACTTTTATGTTAAAATACTTAAAAATGCTCTT--TAA
7  ------------------------------------------------------AGAAAACAAATAATTCTTTAC--AAA
8  --------------------------------------------------------------------------------
9  -----------------------------------------------------------------ACTATTGTAT--AAA
10  TCATTAT----ATTTTAA-----TGTAA---AAAATAAAATT--TAAAGAAAAACCAAAACA--AATTCTGTGAG--GCA
11  --------------------------------------------------------------------------------
12  TCAATTG----TCCATGCTCATAAGATG---TAAAACAAGAA--TGATGGACAAGATAAGGAGGCATCATCA--------
13  ------------------------------------------------------AGAAAAGAAAAAATTCTTTAC--AAA
14  CTTATCA----TGTATATATTTTATCTC---ATCTTACAAAT--AATATAAGAAAATCTCTTAAGAAGAAATGAG--GCG
15  AGAGCAG----ATAACTGACGCGCCCGA---CATCCTCGCCC--GGGACCGGACCGCGCCGGAGGCGGCCATTCA--AAA
16  A-ATTATACTCTATTATATCTTATCGATATAAATATAAATTT--TTTAAAAGAACATTATTTTCAACTAATTATT--TAA

  
0  GTTGTTTTTTTCGTTTTCTTGTATA_GTAGAAACG_AACTAAATACTGATGACCA__CAAGGGGAGC__ATTAAAGCTGA
1  CTTGACGGAGATGTCAAGGTTTGTT-ACGGTGACG-TGCGAAA-ACCGATT--CG--TAAGGGGTGC--TTTAG-GCTGA
2  --------------------------------------------------------------------------------
3  TATTCCTATAAATACTCTTATTCTA-AGAATAAGA-TTTACTATATTATTCTTAT--ACTAAATAAA--AAAACTCTTTT
4  GTTAAAATTTCACTTTTATTGTAAAAGAAGATATA-ATAAAACCATCAAATTTTT--TTAGGGTAAG--GAGTTTTAT--
5  CCGTCACGATAATGTCCATGTTGGC-GCATAGCGT-CGGCACTGTAATGCAGGGG--AACTCGCATG--TGGTTCGCGAG
6  AACTAGTTAATTTGAAAATGATATT-AAACTATTT-AATAAAATATTTTGTATTG--CATTATGAAA--TGTCCTTGTAT
7  AAAACATCTCATGCTATAATGATTG-TTGTACGAT-AATTTCATAGACGTTACCA--CAGGGGGGGC--TTCTTAGCTGA
8  -------------AACTCTATGTTA-TGATGAACGCAACTTAATA---AGAAAAA--CTAGGGGGGCCGATTCTGGCTGA
9  TAGCCAGATTAACGTACAATAAAAT-ATAGCAAAA-AAGTAAATAGAAAAAAGCCTGCAAGGGGAGC--CATATGGCTGA
10  AATATCATCAATTCATATTTAAATA-TAACCATTT-CTTAAACTAGCCTTGTAAA--ATCGTTAAAC--TTTGTAAAAGA
11  -------------AACTCTATGTTA-TGATGAACGCAACTTAATA---AGAAAAA--CTAGGGGGGCCGATTCTGGCTGA
12  --------------------------------------------------------------------------------
13  AAAGAAGTGCATGCTATAATAATTG-TTGTACGAT-AATTTCATAGACGTTACCA--CAGGGGGGGC--TTCTTAGCTGA
14  TGTTATGTATTACTACAAAGAGGAA-CTGATTAAT-ATCATTAAACCGGACAAGC--CAGACCCGGC--AGCTGCTAAGG
15  ACCATCTTGACGCCGTGCCGATAAC-CGTTCCTAA-TTGCGCCATTCACCAGGGG--GGTCCCGGCA--AGGGGCTGAGA
16  AAGAGGTGATTATA------------------------------------------------------------------

  
0  GAGTGA______GC______GGT__TTC_G__TTCTGA_CCCTTTGAACCTGTT__AGTTAACGCTGGCGTAGGGAT_GT
1  GA-----------C------GGT--AT--G--TGCCGAACCCTTCGAACCTGTG--AGCTAACACTCGCGTAGGGAA-TG
2  -------------------------------------------------------------------------AACC-AC
3  TTTATT------TA------AAT--TTA-T--CTAAAT-ATATACACCAATATA--ATAATTTATAGATATTACTTA-GA
4  --------------------------------------------------------------------------------
5  TTGAGA------AA------GGC--CTG-A--GCCTGA-CCCTTAGAACCTGTT--GGTTAAGACCATCGTAGGGAG-CA
6  TGACTT------GA------AAA--TGG-A--TATAAT-GTAATATTACTAATA--AATATATGAATACTTTAGTGA-AT
7  GATTGAATCCGCGT------GTT--TTT-GGATTCTGA-CCCTTTGAACCTGTT--CGTTAATACGAGCGTAGGGATTGT
8  GATAGG------AA------GGTAATGC-T--TTCTGA-CCCTTTGAACCTGTT--TGTTAGTGCAAGCGTAGGGAA-GT
9  GAGTGG------AC------GTA--TAATG--TTCTGA-CCCTTTGAACCTGTT--AGTTAGTACTAGCGTAGGGAT-TG
10  TTAATA------AT------AGA--AAT-T--AATTAT-TTTTATAATAAATTA--TGAAAATTAAGATTCTACGAA-AT
11  GATAGG------AA------GGTAATGC-T--TTCTGA-CCCTTTGAACCTGTT--TGTTAGTGCAAGCGTAGGGAA-GT
12  --------------------------------------------------------------------------------
13  GATTGA------GTCCACGTGTT--TTT-GGATTCTGA-CCCTTTGAACCTGTT--CGTTAATACGAGCGTAGGGATTGT
14  TCCTGC------AG------GAG--ATA-T--TAGGCG-GTCATTACGGAGAAA--TGCGTACAATGATGCAGTTTT-TT
15  TACTGC------TA------GAG--CGC-G--CAGTGA-CCCGTTGAACCTGATCCAGTTCACACTGGCGTAGGGAC-GG
16  --------------------------------------------------------------------------------

  
0  GGCAAA_GTCAAA_TGAATTGCAGATCGTAAA___GCAGTGCGTGG____AAC_TTTTCTCATCCTT_____CCGCGTGC
1  CGACGG-TTGAAC-TCCTCTGTTCGGCTCGGC---ATCCCATATGC----GCG-TTGAGAGAGAGGA-----AGCGT---
2  CCTTCA-ATAAAG-GTTCAAAAATCAACGTTC---AACAATGATGC----CAT-TGGGTCAATCCTT-----GGGATTGG
3  TAAAAT-TATACT-TATATTTTCTCTATATTT---AATTCAATCTT----TTC-TTTAAAACACTTT-----AAATTTGA
4  --------------------------------------------------------------------------------
5  GTAA----------------------------------------------------------------------------
6  TCAAAG-GATGTG-TTTAT-------------------------------------------------------------
7  GGCGAT-TGCATT-TCTAACAATAGAAACTGC---TTTCTTCTGGG----GTA-CGTTTTTGACCAA-----AAAGAAGA
8  G--AAT-GTGAAAGTGACCGGAAAATT-TATC---GCGGCTACTGT----TTC-TTTGCTTATGCTAAGGGACAGTGGGC
9  TAGTCT-TTTTGA-TGGACAGTAGTAATGTGT---GAGCGAAGCAA----TGA-CTGTATAATGCAG-----TCCCATCA
10  ATTATC-GGTTTT-ATTATCTTAACTATAAGT---ACGGGCAATAG----TTT-TGCCTCCTCCGCT-----AATGCTTT
11  G--AAT-GTGAAAGTGACCGGAAAATT-TATC---GCGGCTACTGT----TTC-TTTGCTTATGCTAAGGGACAGTAGGC
12  --------------------------------------------------------------------------------
13  GGCGAT-TGCATT-TCTAACCATAGAAACTGC---TTTCTTCTGGG----GTA-CGTTTTTGACCAA-----AAAGAAGA
14  TCCAAA-GCTCTA-ATTTCAGAGGAAAGCAGA---AACAGTACCGC----GAT-CTGCTTCGCGGCA-----TTTTTTTA
15  TGCAGACGTGCGA-CAGCCAGGATTCCGTGTACCCGCGATCCGTCGGCCAAACGTCTTTTCATCCTT-----CCGGCTTC
16  --------------------------------------------------------------------------------

  
0  TGCTTTTTTGTTGTCCTTTTGGTTGTCTGTCAATGGAAGGAGATAGAT________________________________
1  --------------------------------------------------------------------------------
2  C-CTTTTTTGTTGTCTTTTTG-TTGTCTCAGACACTCACATCCCTAGGGGAGTTGTGGCCTGAGTATTGTAAATTTCTAT
3  ATTTAATAATCTTAAATACTATAATTTCTATATAGTTCTTTAATGAAGGAGGCCTTCTT---------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  GGGGAGTTTATTTTTT----------------------------------------------------------------
8  GCTTTTTTTATTGTTCAAAAGGAGGAATTTGA------------------------------------------------
9  AGAAGCTTCCCGATGGCATTACTTTTTTGTTGTGTAAAAAAATAGGGGAGAGTAGATA----------------------
10  TTTCCTTGTTAGTGCGATGGTTTTACCGTC--------------------------------------------------
11  GCTTTTTTTATTGTTCAAAAGGAGGAGTTTGA------------------------------------------------
12  --------------------------------------------------------------------------------
13  GGGGAGTTTATTTTTTT---------------------------------------------------------------
14  GAGGAGACTGCCCACGTTGAACTGGTTCAAAACACAATCAATGCTTTATTAGATGAATCAGGCGGTGAAGGTGTCGGCAG
15  AGAACTGGGTCTCCAACGCGAAAACTTTGGAGCCTCAAG-----------------------------------------
16  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  GAATAGCTTGCTTTAAGATCGAGAAATTGTTAAATTAGATACAGAAATAAATCGTTCATCCCTCGTAGGACCTCAGTAAA
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  TCAAGGTACAGATCAAGCGCCACTTGATGAAGCGGTTAAACATGCTAATCCTCATCATTATATTATTGGAGCGCAAAGTT
15  --------------------------------------------------------------------------------
16  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  CGCTTTTCAGACCGAGTTGAAGTGTCAGCGTTGTTCCTTTGCGAGGGACGGAAGTAGGGAAATAAATCCCGAAGGAACGC
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  CCCTTCCTGTTGATGCAGGGGGCAATCCGTGGAACGGGTCGTGG------------------------------------
15  --------------------------------------------------------------------------------
16  --------------------------------------------------------------------------------

  
0  __________________________________________
1  ------------------------------------------
2  GCCTCAATTCATCCACCTTGTAATCAAAATGGGGCGAAAGCT
3  ------------------------------------------
4  ------------------------------------------
5  ------------------------------------------
6  ------------------------------------------
7  ------------------------------------------
8  ------------------------------------------
9  ------------------------------------------
10  ------------------------------------------
11  ------------------------------------------
12  ------------------------------------------
13  ------------------------------------------
14  ------------------------------------------
15  ------------------------------------------
16  ------------------------------------------

Complementary Intergenic Regions

IGR  -   3177713  3178375  ()  0  rrnB-16S