BLISSBreaker Lab Intergenic Sequence ServerHome

Intergenic view options: Interleaved

NC_000964.1 Bacillus subtilis (- 2209396 to 2209571) circular

Islands  GACC....GC...AGAAGAACACAA.GAGG...AG.CC.CA..G.G.C.AG..,,,,..GGAA....,,,GAGA..AC,,
5'-   GACCTTTTGCTTTAGAAGAACACAATGAGGTTTAGTCCTCATTGTGTCTAGTTAAAATTGGAATTTTAAAGAGATTACAA
   |         |         |         |         |         |         |         |        
   2209570   2209560   2209550   2209540   2209530   2209520   2209510   2209500  
   |         |         |         |         |         |         |         |        
3'-   CTGGAAAACGAAATCTTCTTGTGTTACTCCAAATCAGGAGTAACACAGATCAATTTTAACCTTAAAATTTCTCTAATGTT
Islands  C.GG,,,,CG,,,.C..C..G.G..AC.CC,,,.CAGGAG.AACACAGA.CAA....AACC..,,,,...C.C.AA.G..

  
Islands  ,.AC,,,,,,.A.G.A.,,,,.AA..GAC.CG.AA.G.GA.C.A.AG.A..A..AAG..AACCAA.,,,GACAAC,,,,,
5'-   ATACAAAAAATATGTATAAAATAATTGACTCGTAATGTGATCTATAGTATTATTAAGTTAACCAATAAAGACAACAAAAA
   |         |         |         |         |         |         |         |        
   2209490   2209480   2209470   2209460   2209450   2209440   2209430   2209420  
   |         |         |         |         |         |         |         |        
3'-   TATGTTTTTTATACATATTTTATTAACTGAGCATTACACTAGATATCATAATAATTCAATTGGTTATTTCTGTTGTTTTT
Islands  .A.G......A.ACA.A....A..AAC.GAGCA..ACAC.AGA.A.CA.AA.AA..CAA..GG..A...C.G..G.....

  
Islands  G,,,.GAGGGG,,,.A
5'-   GAAATGAGGGGAAATA
   |         |    
   2209410   2209400   
   |         |    
3'-   CTTTACTCCCCTTTAT
Islands  C...AC.CCCC...A.

IGR  -   2209396  2209571  ()  13  yopK yopL

Blast Hits

ID Organism Class Accession Start End Operon
0 Bacillus subtilis B/C NC_000964.1 - 2209396 2209571 yopK yopL [- -]
1 Sulfolobus solfataricus A NC_002754.1 - 1057009 1057451 SSO1217 SSO1216 [COG2452 COG0675]
2 Streptococcus pneumoniae B/C NC_003028.1 - 305431 305595 SP0333 SP0332 [COG1476 COG1253]
3 Staphylococcus aureus subsp. aureus N315 B/C NC_002745.1 - 1514853 1515380 SA1308 [COG0539]
4 Clostridium acetobutylicum ATCC824 B/C NC_003030.1 + 1528426 1528838 CAC1387 [COG0840]
5 Wigglesworthia brevipalpis P-g NC_004344.1 - 106958 107014 Wbr0106 [COG0049]
6 Clostridium tetani E88 B/C NC_004557.1 + 286151 286214 CTC00302 CTC00303 [COG0216 -]
7 Bacillus subtilis B/C NC_000964.1 - 2219202 2219575 yonT [-]
8 Synechocystis sp. PCC 6803 Cya NC_000911.1 - 2121147 2121640 desD(des6) [COG3239]
9 Bacillus subtilis B/C NC_000964.1 - 2202241 2202351 yopV [-]
10 Bacillus subtilis B/C NC_000964.1 + 2220629 2221580 yonP [-]
11 Bacillus subtilis B/C NC_000964.1 - 2169486 2169551 yorZ [-]
12 Bacillus subtilis B/C NC_000964.1 - 2216881 2217207 yonX [-]

0  ________________________________________________________________________________
1  AAGTAATTTAAAATAATAAGCGTTAATATACCTCTTTCAAACATGTTTCAAACAAATCATGAAAAGATTATGCATAGTGA
2  --------------------------------------------------------------------------------
3  AAAGAAATAATAAAGGTGAATTATTAGAATTCCAAAAATAATTCATTACATTCATAAAGCATTTTACAAATGGTAAGAAA
4  CAGAATGTAACTTTCAGATGGACAGGCATTGGTAAAATTTATTTTATGATTTTAATTAAAGCTTAGTTATAAGAGCTTAA
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  AAACAAGCCCTATTTTGGGGCTTTTCTTTAGAAAATAAAGTCGAACATAAGTTTTTATTTTGTTGGTAGGAGGCTTTACC
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  AGTAGGTTCCTCACTTTGACAATTATTATATAAGCAAATAGTTTCGTAAACAAAAAGAAGCAAAAAGTTTCATAAAATAT
11  --------------------------------------------------------------------------------
12  GAATAGCGTATGAAAAAAAAAGCAATAAATCGTTTTTGAAACCCTTGGTACATAAGGGTTTTATAGGGGTCTCTCGTAGA

  
0  ________________________________________________________________________________
1  CATCTTTTTAAGC-------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  ATGAGTGTTACAAATCTAAATATTGCAAAAGAAGTTGATTTAGTCACAAAAAATGTCCTATGTAATAATTCGAGAAAGAT
4  AGTGTAGTTTGCTCTATAACTAAGCTTTAATTTTATTTGCTTTGTATAGGCTTTAAGATTGATACAAATATGTTGAAGAA
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  TTGTATCATATTTCACTTCTTGAGGAAAGAAGACGAAAAATTTACACCGGATCCCATCATACATTCCACCTAATCACACT
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  ATCGGGAGAAACTAAAGGTTTCTTTAATTGTTAACAGTGTAGAAACAAACTGTTTACAGAAGGAGATGTTGATTTGAAAA
11  --------------------------------------------------------------------------------
12  AGAAAAGAAGTAAATAAATTAAATAATAAAATAAGAGAATGGGGGTGCTGCTAATTGTTCAAAACGGT------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  GCACTATATACGGTCTTCTTACTATTCAAATGTAAAAGTTGCTTATTTGCGTGGCTTTTTGTTTTATAAAAGTATA----
4  TAGGCTTTGAGATGTGACAAGGAAGTTATAGAAGTAAAGCTTACAAAAAGCTTAAAAATGAATGGTATTAATAATAAAAG
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  CATACATTAACACGCTCTCAGAGCCAATATAACACCTCTCTAAGCATCCTTAATCAATTCCCAA----------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  AGAGAACCTTAGTTAAAGACAAGTTGCTGACTACCTTTCAAGGCTGAGATGGTCAGTAAATACAAGGGTTATATATGAAG
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  TTATCTTAATTATAATAATAAGCTAATTTAGCCACATGTTGAAAAAT---------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  ATATGATATAGTAATGTAAGTGGATAAGAATAAATTATGTCTTCGATTCCCTCGGATTCGTTATAAATACGATTATTTTT
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  AATGAATGGTTATTCATTTTTAAATTGAAAAACAATTTATTTTTTAAAAATTAATTCTTGTGTTTGACCTGGAATTATGA
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  TAGCATTGGTGCAGACCTGCCCAAGTCATTAAATGCACGTATAATGTTCCTTATACACGCATTACAATACCAATATATGG
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  GGGTATATTTACATCTAATGGTAAAATTAAGGGAACAGATGTACCCATAGCACTTCCATTTCCACACCCTATCCAAATTT
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  TCATTTTCCTAATTCCACCTCAAAATCACCCTTTTTCACATCGTAATCGCTATCGTAAAAGCCTTAAATATCAACATTTT
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  CCCCTCTTCAAATTTACTCGATTTCTTCAATATTTAGATAAAGCAACCACTTTCCCCTACTCTCACTTATGTTTTACGAT
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  CGTTTATCCCCTAATCACCATTCGATACAGCAAATCTCCTTATGTTTACTGGCTTTTTAAACTCTTTAATATTTTTTACG
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------

  
0  ________________________GACCTTTTGCTTTAGAAGAACACAATGAGGTTTAGTCCTCATTGTGTCTAGTTAAA
1  ------------------------AAAAAATAAAAGTCAATTCTAAACCCTTACTTTGTTATGTATTTCATTTCAAGCCT
2  -----------------------------------ATCTTATCTATTTTACCACAAATCCGACCAGCTTGCACTTGTCAG
3  ------------------------AAATTTTACTATAATATATCTTGTAGAGAACAATGAAATGACAGACTTATAAAACA
4  ------------------------GTCGAAAAATATGAGATAATATCGTAATAGAAATGAGATATATATTTTATGATTTA
5  ---------------------------------------------------ATTTAAATTTAAAAAAATAAAATATTAAA
6  --------------------------------------------------------------------------------
7  ------------------------TCCAATTGTATTCTTGTTCATTCAAACAGCACACAAGGCATCTTAATACCATCCAT
8  --------------------------------------------------------------------------------
9  --------------------------------AATTAGATTCGGTCACATAAATTGGCCGAATCTAATTGACAGATATTA
10  ATAAGCATGTTTTTAGATTACGATAATCCCCCCTTCTCTAAATGCTTCAGAATTCACCTCTTAACCTGGAGCTATTAACA
11  --------------------------------------------------------------------------------
12  ------------------------TCGTTCCTCACCTGAACAATTTTTGCTCACACCACCCCCAAACCCCCTCATGAGCA

  
0  ATTGGAATTTTAAAGAGATT_ACAAATA___CAAAAAATATG_TATAA__A_ATAA_TTGACT______CGTAATGTGAT
1  TTGAACCTCTGCTGGCTTAT-CTCTGTC---TCCCCGATAGA-CCCTA--A-ATCA-CTCTCT------TGAAAATAAAT
2  ACAAATAGGACAAGGAGACT-ACTATTTCTTCAAAAAATATG-TCAAA--A-ATAC-TTGACA------CTTTATGTTTA
3  AAATAGTAAGCTATGCTAAT-TTTTATA---CAAAAAATATG-TATAA--ACATAG-CGGACTTTATTACTTGTTTGAAT
4  TTTGAAAAATTCAATA-ATT-AAATATC---CTAAAA-TATG-TATAA--A-ATAA-AAGATA------AGGGTGGAGAG
5  ATTGGAGTTTTAAATGCCTC-GCCGTAA---A------------------------------------------------
6  -------------------T-TTAAATA---CAAAAAATATGATATAATTA-ATAT-TTG--T------TAAAATAT-AT
7  CAACACACAAATAACTTACC-ACAAATA---TAAAAAATATG-TATAT--A-AAAA-TC-ATG------AATTATGTTAT
8  ----CATGGGGGGATGGAAC-TCTTGAC---TCGGCCCAATG-GTGAT--C-AAGA-AAGAAC------GCTTTGTCTAT
9  AATGATGGGTTATAGTTTAT-TCAAATA---CAAATAATATG-TATAT--A-GGAG-ATG----------GTAAAGAGAG
10  CACTAGCGAAAAAACAATAG-ACAAATA---CAAATAATATG-TATAT--A-ATAA-ATCCAT------AAGTGAGGAGG
11  -----------AAACCGATAGACAAAAA---CAAATAATATG-TATAT--A-ATAAATTTACG------T-TGAGGCGAA
12  ATT--AATATTAACGCTATA-TCAAATA---CAAAAAATATG-TATTT--A-ATTA-TTGATT----------AT-----

  
0  C_TATAGTATTATTAAGTTAA___CCAATA____AAGACAA___CAAAAAGAAATGAGGGGAAATA______________
1  C-TATAGTATTATTAAGCGTT---TTCTCT----ATTTCGA---TTAGGATTATCTTTAGGAACTAATGTTATGAATAAA
2  A-AAGACTATAATATAGTCAA---ATATAT----ACGACAT---AAATCAGAAAGGAGAACAG-----------------
3  A-TATGGTTGTAATAAATATATGTCCAACT----AATTTA----CAGAATGAGATTAAGTGACATATTTATGGATACAAC
4  A-AGGAAG------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  T-TACGGAGTGAGAAAGTT-------------------------------------------------------------
7  AATAGAGTCATAGGAAAGGAG---GTGTAC----ATA-------------------------------------------
8  G-TTTAGTATTTTTAAGTTAA---CCAACAGCAGAGGATAACTTCCAAAAGAAATTAAGCTCAAAAAGTAGCAAAATAAG
9  C-T-----------------------------------------------------------------------------
10  T-GAGATA------------------------------------------------------------------------
11  G-GAGAGTGTTA--------------------------------------------------------------------
12  --TATAG-ATTATCAAGTTAT-----AATA----TAAATAA---CAAATACAAATAATATGTATAAAAACAGGAGGTAGT

  
0  ________________________________________________________________________________
1  AGAATGAGTGAAAGTCTGAAATTTTTCCCTCTTCTCATTTTTGAATATTGTGAAAATAGTTTATCCTTTGATACGTTTAT
2  --------------------------------------------------------------------------------
3  TAATTTACTAAATGTAATAAAGGTAGAATTTCTTGACAATTCTGTCAGTTTATAAGATGTTATAAATATGTAGTGTATAA
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  TTTAATTCATAACTGAGTTTTACTGCTAAACAGCGGTGCAAAAAAGTCAGATAAAATAAAAGCTTCACTTCGGTTTTATA
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  TAAA----------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  TCCTGCAACTGGGGTTGCCGTTGCCAACGATTTCCGATAAACCGTAAAGTTTATATTATTTTGACACAAACTCTTATACA
2  --------------------------------------------------------------------------------
3  GGAGGCAAACAAG-------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  TTGTGACCATGGTTCCCAGGCATCTGCTCTAGGGAGTTTTTCCGCTGCCTTTAGAGAGTATTTTCTCCAAGTCGGCTAAC
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  TCCCCCATTTTTAGGCAAAATCATATACAGACTATCCCAATATTGCCAGAGCTTTGATGACTCACTGTAGAAGGCAGACT
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  AAAATTCTAGCAATGGACTCCCAGTTGGAATAAATTTTTAGTCTCCCCCGGCGCTGGAGTTTTTTTGTAGTTAATGGCGG
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------

  
0  _____________________________________
1  -------------------------------------
2  -------------------------------------
3  -------------------------------------
4  -------------------------------------
5  -------------------------------------
6  -------------------------------------
7  -------------------------------------
8  TATAATGTGAAAGTTTTTTATCTATTTAAATTTATAA
9  -------------------------------------
10  -------------------------------------
11  -------------------------------------
12  -------------------------------------