BLISSBreaker Lab Intergenic Sequence ServerHome

Intergenic view options: Interleaved

NC_000964.1 Bacillus subtilis (+ 1482876 to 1483520) circular

Islands  CGGC.G,,,GGCCG........A.G,,,.G,,,,,,,.A.C,,,,,,CGA..GACA..GA.AC.GAGAA.CA..A.CA..
5'-   CGGCTGAAAGGCCGTTTTTTTTATGAAATGAAAAAAATATCAAAAAACGATTGACATTGATACTGAGAATCATTATCATT
      |         |         |         |         |         |         |         |     
      1482880   1482890   1482900   1482910   1482920   1482930   1482940   148295
      |         |         |         |         |         |         |         |     
3'-   GCCGACTTTCCGGCAAAAAAAATACTTTACTTTTTTTATAGTTTTTTGCTAACTGTAACTATGACTCTTAGTAATAGTAA
Islands  GCCGAC...CCGGC,,,,,,,,.AC...AC.......A.AG......GC.AAC.G.AAC.A.GAC.C..AG.AA.AG.,,

  
Term (99.90)%  ---------------------------------------------------------------CTTGGCGCTACCCCCGC
Islands  .AA..A.AGAGAGAAGC.AC.C.C.G..CCCCAACCCC.C.A.CAGA.CAAGA.CCG,,,,,,C..GGCGC.ACCCCCGC
5'-   TAATTATAGAGAGAAGCTACTCTCTGTTCCCCAACCCCTCTATCAGATCAAGATCCGAAAAAACTTGGCGCTACCCCCGC
      |         |         |         |         |         |         |         |     
  0   1482960   1482970   1482980   1482990   1483000   1483010   1483020   148303
      |         |         |         |         |         |         |         |     
3'-   ATTAATATCTCTCTTCGATGAGAGACAAGGGGTTGGGGAGATAGTCTAGTTCTAGGCTTTTTTGAACCGCGATGGGGGCG
Islands  ,..AA.A.C.C.C..CGA.GAGAGACAAGGGG..GGGGAGA.AG.C.AG..C.AGGC......GAACCGCGA.GGGGGCG
Term (98.40)%  ---------------------------------------------------------------GAACCGCGATGGGGGCG

  
Term (99.90)%  CAAG----------------------------------------------------------------------------
Islands  CAAG......A...G.C,,,GCA.AGGACAA.CCAA.G,,,CAA.,,,CC.AAC.AG.GG.,,,CG...AACACGGGGAG
5'-   CAAGTTTTTTATTTGTCAAAGCATAGGACAATCCAATGAAACAATAAACCTAACTAGTGGTAAACGTTTAACACGGGGAG
      |         |         |         |         |         |         |         |     
  0   1483040   1483050   1483060   1483070   1483080   1483090   1483100   148311
      |         |         |         |         |         |         |         |     
3'-   GTTCAAAAAATAAACAGTTTCGTATCCTGTTAGGTTACTTTGTTATTTGGATTGATCACCATTTGCAAATTGTGCCCCTC
Islands  G..C,,,,,,.,,,CAG...CG.A.CC.G..AGG..AC...G..A...GGA..GA.CACCA...GC,,,..G.GCCCC.C
Term (98.40)%  GTTC----------------------------------------------------------------------------

  
Islands  ,,,CA..GAG.GCCGAACACCCC.GACAC.GC.GCACGGG.GAGGAGG,,,,..CG..C.G,,,.GA..A...CAG..CC
5'-   AAACATTGAGTGCCGAACACCCCTGACACTGCTGCACGGGTGAGGAGGAAAATTCGTTCTGAAATGATTATTTCAGTTCC
      |         |         |         |         |         |         |         |     
  0   1483120   1483130   1483140   1483150   1483160   1483170   1483180   148319
      |         |         |         |         |         |         |         |     
3'-   TTTGTAACTCACGGCTTGTGGGGACTGTGACGACGTGCCCACTCCTCCTTTTAAGCAAGACTTTACTAATAAAGTCAAGG
Islands  ...G.AAC.CACGGC..G.GGGGAC.G.GACGACG.GCCCAC.CC.CC....AAGCAAGAC...AC.AA.,,,G.CAAGG

  
Islands  G..G...ACC.C.A.CCAGCA.GAC.CCCA..GA..A.GGCCACGCGGGAC..CACCA.,,,,..C,,,,GAAGG....G
5'-   GTTGTTTACCTCTATCCAGCATGACTCCCATTGATTATGGCCACGCGGGACTTCACCATAAAATTCAAAAGAAGGTTTTG
      |         |         |         |         |         |         |         |     
  0   1483200   1483210   1483220   1483230   1483240   1483250   1483260   148327
      |         |         |         |         |         |         |         |     
3'-   CAACAAATGGAGATAGGTCGTACTGAGGGTAACTAATACCGGTGCGCCCTGAAGTGGTATTTTAAGTTTTCTTCCAAAAC
Islands  CAAC,,,.GGAGA.AGG.CG.AC.GAGGG.AAC.AA.ACCGG.GCGCCC.GAAG.GG.A....AAG....C..CC,,,,C

  
Islands  AC,,,G..GC,,,,,GGCA..C..AA.GC.GCC,,,GA..CG,,,,,,,..A.AA..A.G.GCA.GACA..C,,,,,,,G
5'-   ACAAAGTTGCAAAAAGGCATTCTTAATGCTGCCAAAGATTCGAAAAAAATTATAATTATGTGCATGACATTCAAAAAAAG
      |         |         |         |         |         |         |         |     
  0   1483280   1483290   1483300   1483310   1483320   1483330   1483340   148335
      |         |         |         |         |         |         |         |     
3'-   TGTTTCAACGTTTTTCCGTAAGAATTACGACGGTTTCTAAGCTTTTTTTAATATTAATACACGTACTGTAAGTTTTTTTC
Islands  .G...CAACG.....CCG.AAGAA..ACGACGG...C.AAGC.......AA.A..AA.ACACG.AC.G.AAG.......C
Term (35.14)%  ----------------CGTAAGAATTACG---------------------------------------------------

  
Islands  CC.C,,,C.,,,G,,,,,.AG.......CAC.......C...GC..,,,..CAGCAG.G,,,,.GCCA.CC.G.CCGAC.
5'-   CCTCAAACTAAAGAAAAATAGTTTTTTTCACTTTTTTTCTTTGCTTAAATTCAGCAGTGAAAATGCCATCCTGTCCGACT
      |         |         |         |         |         |         |         |     
  0   1483360   1483370   1483380   1483390   1483400   1483410   1483420   148343
      |         |         |         |         |         |         |         |     
3'-   GGAGTTTGATTTCTTTTTATCAAAAAAAGTGAAAAAAAGAAACGAATTTAAGTCGTCACTTTTACGGTAGGACAGGCTGA
Islands  GGAG...GA...C.....A.C,,,,,,,G.G,,,,,,,G,,,CGAA...AAG.CG.CAC....ACGG.AGGACAGGC.G,

  
Islands  ..A.GG.A.GA.GC.CAA.AGAAC..G.A..A.AA.,,,.AC..G..GA...GAAG..GC.....G,,,GGAG.C.....
5'-   TTATGGTATGATGCTCAATAGAACTTGTATTATAATAAATACTTGTTGATTTGAAGTTGCTTTTTGAAAGGAGTCTTTTT
      |         |         |         |         |         |         |         |     
  0   1483440   1483450   1483460   1483470   1483480   1483490   1483500   148351
      |         |         |         |         |         |         |         |     
3'-   AATACCATACTACGAGTTATCTTGAACATAATATTATTTATGAACAACTAAACTTCAACGAAAAACTTTCCTCAGAAAAA
Islands  ,,.ACCA.AC.ACGAG..A.C..GAACA.AA.A..A...A.GAACAAC.,,,C..CAACG,,,,,C...CC.CAG,,,,,

  
Islands  ..AGA
5'-   TTAGA
      |
  0   1483520   
      |
3'-   AATCT
Islands  ,,.C.

IGR  +  1482876  1483520  ()  15  ykuJ

Blast Hits

ID Organism Class Accession Start End Operon
0 Bacillus subtilis B/C NC_000964.1 + 1482876 1483520 ykuJ [COG4703]
1 Oceanobacillus iheyensis B/C NC_004193.1 + 999940 1000557 dhbA dhbC dhbE dhbB dhbF OB0959 OB0960 OB0961 [COG1028 COG1169 COG1021 COG1535|COG3433 COG1020|COG3319 COG3251 COG0477 COG2091]
2 Oceanobacillus iheyensis B/C NC_004193.1 - 752237 752399 feuA feuB OB0708 OB0707 OB0706 [COG0614 COG0609 COG0609 COG1120 COG2819]
3 Clostridium acetobutylicum ATCC824 B/C NC_003030.1 + 3697383 3697562 CAC3502 [COG2188]
4 Clostridium acetobutylicum ATCC824 B/C NC_003030.1 + 1746684 1746818 CAC1602 [COG4378]
5 Shewanella oneidensis MR-1 P-g NC_004347.1 - 3490722 3490901 SO3343 [-]
6 Bacillus halodurans B/C NC_002570.1 + 543042 543446 BH0515 [COG4378]
7 Staphylococcus aureus subsp. aureus N315 B/C NC_002745.1 - 1777933 1778264 SA1552 [-]
8 Staphylococcus aureus subsp. aureus N315 B/C NC_002745.1 + 2253335 2253435 SA1983 [COG4264]
9 Staphylococcus aureus subsp. aureus N315 B/C NC_002745.1 + 128519 128748 SA0112 SA0113 SA0114 SA0115 SA0116 SA0117 SA0118 SA0119 SA0120 [COG0031 COG2423 COG4264 COG0477 COG4264 COG4264 COG3836 COG0019 COG1475]
10 Bacillus halodurans B/C NC_002570.1 + 3414008 3414874 BH3290 BH3291 BH3292 [COG0614 COG0609 COG1120]
11 Helicobacter pylori 26695 P-e NC_000915.1 - 780898 781183 omp17 [-]
12 Helicobacter pylori 26695 P-e NC_000915.1 + 774084 774514 omp16 [-]
13 Haemophilus influenzae Rd P-g NC_000907.1 - 1550127 1550263 HI1465 [COG0465]
14 Bacillus subtilis B/C NC_000964.1 + 1486331 1486441 ykuN ykuO ykuP ykuQ [COG0716 - COG0716 COG2171]

0  ________________________________________________________________________________
1  ATAGAAAATATACGTAGAGCATTCTCATTTTGATGAGGGTGCTTTTTTGATAGTTAAGAAGCATTTGTAGGAAGAAATTT
2  CTACTATTTCATCTCCTACAACTTTAACCAAATTCTACCATTAT------------------------------------
3  --------------------------------------------------------------------------------
4  TAAAGTCCTTATTAAAAGAGACAATGGTCTAATAAT--------------------------------------------
5  --------------------------------------------------------------------------------
6  TTGTTATTAACGCTAAGGCTTTTCCCTTAGCGTTTTTTTGTACCTTAAAAGAAATGAAATTATCATAAGGGGAGACTCTG
7  TAAATCATGTCAATTGTTTAATAAAGATAAGTAAATAGTTTAATAGACCGGACTGTTGGAGATGCATTATTTCAGCAGTT
8  --------------------------------------------------------------------------------
9  TGACTAATTAGCCTCCTTCGTGATGTATGACAATGAGAATCATTATCACGATTTAGTATGAATTAAATTTTTTCCTAAGT
10  TTTTTGTGTAAGGTGCTGTCCCTTGTTCTTTTAGGCAGCACCTTACACAAACTCATGATTAGCATCTGTTCGCGGTAGCC
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  AAATTGCTT-----------------------------------------------------------------------
14  AGACAGCGAGGTG-------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  TACACCTAAATTAGTAGAACACACTCGTGATGGTTCTTAACAGACGCTTGTGCTTTTTCTCAAATTAGCAGATGGCTAAA
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  ACGTGAGAACTTGGTGCTAAGACGAGTTCTCCAATAAGGAAGTATAGAGAGCTGTCTAGCGAGGGCGTCGATCATCCGTG
7  CGGTTTTTTGCTGTGCTAAAAATAGATTCCATTTGGCGAATCTAACGACAATGTTTGAAGGTGGTTAATTAATGTATATG
8  --------------------------------------------------------------------------------
9  CAATAAAATATTTATGATTTACA---------------------------------------------------------
10  AGACGGTTAGCCCTAGATTGTTCGCTTGGCATCACGATTGTTCTTCATGAACTTGAACGTAAATCGTTCCGAAATAGCGG
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  GGATTATTTTATCGAATCTATACAAAAAATGTAGGAATTTAGAAGGAAACGAAAATAGCATGGAAAAAATTATCTTTATT
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  AACCCTTTCTCTCCAGTGCTTCGCCAGTGGCTATGTATATGGGCGACGCTTTTGCGTTTTGCTGAATTGTTAGCGTATAA
7  AAGATAAAAAGTGGGTTTGAAGAATAGGAAAGCGATGCAATGAATATTCATATTAAAAAAT-------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  TCCCCGAAATAAGCGTCTAATTTCCACTAACCACTTTCAGGCAATGAAAGGTTAGAAGGGATATGGGCATCTGCCCCATT
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  TCCATGCTGATTTTTTAGTTATTAGGTGAAAATCGCACTATATCAACACTTAAACTGTATAGTTGGTTCTCATTTCCTTA
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  AAGAGTTCGGTTCGTAGAATAAGAAAAAC---------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  GTGTGCTCCTCCTATACCATCATTCTCTCATACAATGATTTTTCGTCAGCTTGATTGCTTTCATGGGTACCAATCACCTT
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  AATTAAACTCAATGATAATTATTTTGGATGGTAATAACTGTATTTTAGAGATAAGTAACTGTTATAGACCGGTATATCAA
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  GAAACCACCTGTCAATTCATCAGGTTCTCCCCAAAAGTGCCAGATGTAATTATTCTCTTTATTTGGGTAAAATCTCGTCG
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  CCTTCAGGAAGTTATGATGAGCATAATATATTGTATGTATCCTAAATAAT------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  CTTCATCATCGTCAAAAATAAAATAAATTTTTCCTTATTCGCCAATCATCGTATAGGAACCAGATGTGAATAACGCACTC
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  TCTTGCCAACTCTCTTCTGTTTGCGTGCATCCAATAAGAACGACCACTAAACCGAAAAAAGAGCGACGGTTAAACTTTTC
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  TTAGACATAAACTTCCTCTCTTTTCGTCTCATCTTTGTATCTTTCAACATTTGAAGGGTTATTTCCTCTTCAACCTTTAA
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  ACGTGAGGACTGTTTTTCTAGGCATACTAAAATGCACGGATCAACAATTGTTGTGCTAGCTTCATCTATAATTCTCACTT
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  _________________CGGCTGAAAGGCCGTTTTTTTTATGA_AATGAAAAAAAT_ATCAAAA___AACGATTG_ACAT
1  -----------------ATAGGCTTTTTTACCTTGTTGACGGA-TAGGTTCATGTA-TTCTAAA---GTATTCAG-TATA
2  -----------------TAAATAAATTAGTCAGCCTCTACTAA-AATAATAAAAAT-ATAAAATTTTAATAAAAC-ATAT
3  --------------------------------------------------------------------------------
4  -----------------AGTATTGTCTCTTTTAAATTTGACTT-AATAGAGGAAAT-GTTATAA---AATCTTAT-TAAA
5  -------------------------------------------------------A-GTATTTC---CCCCTTAA-TCGC
6  -----------------ATAAGAATGTATTTGCGAGTTCATGA-TTTATTCAAAAA-ATTTATT---CAGGGAAA-CTGT
7  -----------------TTTAATAAAATAGGTTGCAATATTTA-ATTGGGATGCGC-TACAATT---AACACTAA-TAAT
8  -----------------------------------------------------AAA-ACTTACA---CCCGCATT-CTGT
9  -----------------TGCAACTTATAATTATTTGACATATA-AATGCATAAAAA-AT-ATAA---TCCTAATT-AC-T
10  TTTCCATGATCATCCTTTTCACCATTATAAAAGACATTGCAGA-CGAGGAAAAACT-TTCAATA---AATTGTTG-ACTT
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  -----------------CCCAAAAGTTAAATCTAGGTTAAAAA-AAGGTTACAAGT-ATAAAAA---AAATACAACAAAT
14  -----------------CTGTCTTTTTTTTATTTATCTGTTGACAATGAAAATCATTATCATTT---AAAGTGAT-ACAT

  
0  _TGATAC_TGAGAATCATTATCATTTAATTATAGAGAGAAGCTACTCTCTGTTCCCCAACCCCTCTATCAGATCAAGATC
1  -TGATAA-TGATAATCATTATCATTTAAATTACCAATTGATACCAACTAAAGCTCGTCTTTATTTTTTTATATCTCATTG
2  -TGAAAT-TGAGAATCATTATCAATTATAATGTAAATAATTAACAGAGAGGGGAATTCAAA-------------------
3  --------------------------------------------------------------------------------
4  -TGATAT-TGATAATCATAATCATTTAATAAGGAGGAGAGTTTA------------------------------------
5  -CTTAAC-TGATAATCATTATCATTTAAAGTGGTTACTGAAGTCAAGCTGAATAACATACTGCTTTTTCATAATATTGAG
6  -TGACAC-TGATAATCATTATCAATTAAAATGAGAACTAACATATTGAGAACCATTTTCAAGTAAAGGAGTGTGAAGGCG
7  -TGATAT-TGATAATTATTATCAATTAAATATAATCTTATAGGAGTTGTTAACAAC------------------------
8  -TGATAA-TAAGAATCATTATCATTAA--TATGGATTATACAAATCTATCTTGCTTTTGTAAAATATTTCATAGAGGTGA
9  -TGATAG-TGAGAATCATTATCAATTAGGTAACACACAATATTATAGAATTTTAAATTTGAGGAGGAAGCGCTT------
10  -TAATAA-TGATATTCATTATCATTTAAGTTGATATTGATATTCATTATCATTTGTAATTGTAGGAGAGGTTTAG-----
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  -TAAGAAATGAAAATCATTATCATTTAATGTCTATTACATTAATCAATGGTATTATGATGAAATCGATGCA---------
14  ATGATAT-TGAAAATCATTATCAACTAATGGGGTGATAAC----------------------------------------

  
0  CGAAAAAACTTGGCGCTACCCCCGCCAAGTTTTTTATTTGTCAAAGCATAGGACAATCCAATGAAACAATAAACCTAACT
1  AGAATGATTATCAATTGAAGGAGGTATGGTGAA-----------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  TTGTAGAACTAGTCATTGCTCTGTAAGCTAAATTTATGTGTTGGCTTATTTGTGTTCCGTACGAACATCCAAGGAAATTA
6  G-------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  ATT-----------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  AGTGGTAAACGTTTAACACGGGGAGAAACATTGAGTGCCGAACACCCCTGACACTGCTGCACGGGTGAGGAGGAAAATTC
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  TC------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  -------------------------------AGCTTAAACCACACCCCTTTCTCTATCAAAGCTTCAAACCCTTCAAGCA
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  GTTCTGAAATGATTATTTCAGTTCCGTTGTTTACCTCTATCCAGCATGACTCCCATTGATTATGGCCACGCGGGACTTCA
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  -----------------------------------------------------TTTGGATTCGTTCTCATTAAACACTGA
12  GAAATCCTAAACGCTTTTAGCGTTTGGGATAAATGCGTTCTGTTAAGCGTTATCAAAATTCTATTCTCATTAAATATTGC
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  CCATAAAATTCAAAAGAAGGTTTTGACAAAGTTGCAAAAAG__G__CATTC______TTAATGCTGCCAAAGATTCGAAA
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  TGATAAAATTCAAAAGATGGTTTTATC---GTTACAAAATT--CAACATT-------TCAAAGATAAATAAGTTAAAATA
12  TTATAAAATTCAAAAGATGGTTT---CATTATTACAAAAATTAA--CACTCCAAAGATAAATAGTTAAAAAACACCCAAA
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ____AAAATTATAATTATGTGCATGACATTCAAAAAAAGCCTCAAACTAAAG__AAAAATAGTTTTTTTCACTTTT__TT
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  ----------------TTTAATCATTCTCCTTTGCGTTATTGTATTCATTTG--TTTCTATATATACTATAATACA--AT
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  CCCCAAAATCTTTTTTTTTTTTTTGAAATCCAA--------TCAATTTATAGT-AAAATTAGGTTCATTGTAAATA--TA
12  ----AATCTTTTTTTTTTTTTTTTGAAATCCAATAAAT---TTATGGTAAAGTTAAACATATTGTAAATAAATTTTAATT
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  TCTTTGCTTAAATTCAGCAGTGAAAATGCCATCCTGTCCGACTTTATGGTATGATGCTCAATAGAACTTGTATTATAATA
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  ATAATACATTGTGTCAATGGAAATTTTTATTTTTTTATTGATATACGCTATATACATTGATTTATCTTTGTATTATAATA
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  TTATCACTTCATGATATTCTTACAACAAAAACATTACTTTAAGGAACATTTTATGAAAAAGACAATTCTGCTCTCTCTCT
12  TCTATTCATGTTTACAATAAAAAAATTACTTTAAGGAAC-ATTTTATGAAAAAGACAATTCTACTCTCTCTCTCTCTCTC
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  AATACTTGTTGATTTGAAGTTGCTTTTTGAAAGGAGTCTTTTTTTAGA___________________________
1  ---------------------------------------------------------------------------
2  ---------------------------------------------------------------------------
3  AATACATA---ATTACAATTAGGTATTCATATGGAGGTTATAT--------------------------------
4  ---------------------------------------------------------------------------
5  ---------------------------------------------------------------------------
6  ---------------------------------------------------------------------------
7  ---------------------------------------------------------------------------
8  ---------------------------------------------------------------------------
9  ---------------------------------------------------------------------------
10  ---------------------------------------------------------------------------
11  CTCGCTTCATCGCTCTTGCACGCTGAAGACAACGGCTTTTTT---------------------------------
12  GCTTCATCGCTCTTGCACGCTGAAGACAACGGCTTTTTTGTGAGCGCCGGCTATCAAATCGGCGAAGCGGTGCAA
13  ---------------------------------------------------------------------------
14  ---------------------------------------------------------------------------