BLISSBreaker Lab Intergenic Sequence ServerHome

Intergenic view options: Interleaved

NC_000964.1 Bacillus subtilis (+ 1257608 to 1257962) circular

Islands  ,,,,,CA..CC.CCAGGACA.CAC.A.AC...C..GCA....CAA..A..G.ACCA.GAA..A..AG,,,...C.C.C..
5'-   AAAAACATTCCTCCAGGACATCACTATACTTTCTTGCATTTTCAATTATTGTACCATGAATTATTAGAAATTTCTCTCTT
    |         |         |         |         |         |         |         |       
    1257610   1257620   1257630   1257640   1257650   1257660   1257670   1257680 
    |         |         |         |         |         |         |         |       
3'-   TTTTTGTAAGGAGGTCCTGTAGTGATATGAAAGAACGTAAAAGTTAATAACATGGTACTTAATAATCTTTAAAGAGAGAA
Islands  .....G.AAGGAGG.CC.G.AG.GA.A.G,,,GAACG.,,,,G..AA.AACA.GG.AC..AA.AA.C...,,,GAGAG,,

  
Islands  .,,,CGG..CGGCACACGAAG,,,,,,G.G..G,,,.,,,C.G.GAA..GCGC.AA.A.,,,,CAA.CAG,,,,..G,,,
5'-   TAAACGGTTCGGCACACGAAGAAAAAAGTGTTGAAATAAACTGTGAATTGCGCTAATATAAAACAATCAGAAAATTGAAA
    |         |         |         |         |         |         |         |       
    1257690   1257700   1257710   1257720   1257730   1257740   1257750   1257760 
    |         |         |         |         |         |         |         |       
3'-   ATTTGCCAAGCCGTGTGCTTCTTTTTTCACAACTTTATTTGACACTTAACGCGATTATATTTTGTTAGTCTTTTAACTTT
Islands  ,...GCCAAGCCG.G.GC..C......CACAAC...A...GACAC..AACGCGA..A.A....G..AG.C....AAC...

  
Islands  .CGA.A...C..A.CG.GAGAGG.GGAGGGAC.GGCCC..AG,,,CC.CAGCAACCGGC..G....GCA...GC,,,GCG
5'-   TCGATATTTCTTATCGTGAGAGGTGGAGGGACTGGCCCTTAGAAACCTCAGCAACCGGCTTGTTTTGCATTTGCAAAGCG
    |         |         |         |         |         |         |         |       
    1257770   1257780   1257790   1257800   1257810   1257820   1257830   1257840 
    |         |         |         |         |         |         |         |       
3'-   AGCTATAAAGAATAGCACTCTCCACCTCCCTGACCGGGAATCTTTGGAGTCGTTGGCCGAACAAAACGTAAACGTTTCGC
Islands  AGC.A.,,,GAA.AGCAC.C.CCACC.CCC.GACCGGGAA.C...GGAG.CG..GGCCGAAC,,,,CG.,,,CG...CGC

  
Term (100.00)%  -----------------------------------------------------------CCCCTTCTTCTTATGAAGAAG
Islands  CCAAGG.GC.,,,.CCAGCAAGCG......A.GC..GGAAGA.AAGAAGAAGCG..,,,CCCC..C..C..A.GAAGAAG
5'-   CCAAGGTGCTAAATCCAGCAAGCGTTTTTTATGCTTGGAAGATAAGAAGAAGCGTTAAACCCCTTCTTCTTATGAAGAAG
    |         |         |         |         |         |         |         |       
    1257850   1257860   1257870   1257880   1257890   1257900   1257910   1257920 
    |         |         |         |         |         |         |         |       
3'-   GGTTCCACGATTTAGGTCGTTCGCAAAAAATACGAACCTTCTATTCTTCTTCGCAATTTGGGGAAGAAGAATACTTCTTC
Islands  GG..CCACGA...AGG.CG..CGC,,,,,,.ACGAACC..C.A..C..C..CGCAA...GGGGAAGAAGAA.AC..C..C
Term (99.48)%  -----------------------------------------------------------GGGGAAGAAGAATACTTCTTC

  
Term (100.00)%  GGG--------------------------------
Islands  GGG.....A....G,,,,GGGAAGG.G.CAGC.A.
5'-   GGGTTTTTATTTTGAAAAGGGAAGGTGTCAGCTAT
    |         |         |         |  
    1257930   1257940   1257950   1257960   
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3'-   CCCAAAAATAAAACTTTTCCCTTCCACAGTCGATA
Islands  CCC,,,,,.,,,,C....CCC..CCACAG.CGA.A
Term (99.48)%  CCC--------------------------------

IGR  +  1257608  1257962  ()  51  yjcI yjcJ

Blast Hits

ID Organism Class Accession Start End Operon
0 Bacillus subtilis B/C NC_000964.1 + 1257608 1257962 yjcI yjcJ [COG0626 COG0626]
1 Listeria innocua Clip11262 B/C NC_003212.1 + 1446186 1446352 lin1446 [COG0477]
2 Thermoanaerobacter tengcongensis strain MB4T B/C NC_003869.1 - 1750207 1750551 MetF MetH2 EbsC [COG0685 COG0646|COG1410 COG2606]
3 Methanosarcina acetivorans str. C2A A NC_003552.1 + 3770610 3772408 pqqE [COG0535]
4 Listeria innocua Clip11262 B/C NC_003212.1 - 2538047 2538629 lin2514 lin2513 [COG1135 COG2011]
5 Thermoanaerobacter tengcongensis strain MB4T B/C NC_003869.1 - 2076498 2076819 ThrA MET17 [COG0460 COG2873]
6 Clostridium tetani E88 B/C NC_004557.1 + 303232 303525 CTC00321 [COG0192]
7 Staphylococcus epidermidis ATCC 12228 B/C NC_004461.1 + 15848 16135 SE0011 [COG2021]
8 Staphylococcus epidermidis ATCC 12228 B/C NC_004461.1 - 402422 402540 SE0407 SE0406 SE0405 [COG1121 COG1108 COG0803]
9 Staphylococcus epidermidis ATCC 12228 B/C NC_004461.1 - 1940269 1940573 SE1902 [COG1757]
10 Oceanobacillus iheyensis B/C NC_004193.1 - 3200452 3200962 OB3078 OB3077 [COG2141 COG0189]
11 Oceanobacillus iheyensis B/C NC_004193.1 - 3466292 3466717 OB3328 OB3327 [COG0371 COG1464]
12 Oceanobacillus iheyensis B/C NC_004193.1 - 2708365 2708829 OB2640 [COG3464]
13 Oceanobacillus iheyensis B/C NC_004193.1 - 2437082 2437389 OB2384 OB2383 [COG1135 COG2011]
14 Clostridium perfringens B/C NC_003366.1 - 2664969 2665304 CPE2317 [COG1757]
15 Listeria innocua Clip11262 B/C NC_003212.1 - 327107 327488 lin0313 lin0312 lin0311 [COG1464 COG1135 COG2011]
16 Clostridium tetani E88 B/C NC_004557.1 - 1456595 1456836 CTC01355 [COG1135]
17 Staphylococcus epidermidis ATCC 12228 B/C NC_004461.1 + 588039 588290 SE0600 SE0601 SE0602 [COG1135 COG2011 COG1464]
18 Staphylococcus epidermidis ATCC 12228 B/C NC_004461.1 - 1508405 1508773 SE1458 [COG0192]
19 Oceanobacillus iheyensis B/C NC_004193.1 + 726566 727206 OB0691 [COG0646]
20 Clostridium tetani E88 B/C NC_004557.1 - 2676797 2677154 CTC02520 [COG1757]
21 Oceanobacillus iheyensis B/C NC_004193.1 - 1097834 1098421 OB1054 [COG0620]
22 Oceanobacillus iheyensis B/C NC_004193.1 + 1318940 1319214 OB1276 [-]
23 Listeria monocytogenes strain EGD B/C NC_003210.1 - 309156 309537 lmo0285 lmo0284 lmo0283 [COG1464 COG1135 COG2011]
24 Listeria innocua Clip11262 B/C NC_003212.1 - 1789980 1790286 lin1789 lin1788 lin1787 lin1786 [COG0620 COG0626 COG0626 COG0646|COG0685]
25 Listeria innocua Clip11262 B/C NC_003212.1 - 1772247 1772656 metK [COG0192]
26 Listeria innocua Clip11262 B/C NC_003212.1 - 636706 637152 lin0604 lin0603 [COG2873 COG2021]
27 Bacillus subtilis B/C NC_000964.1 - 2690714 2690910 yqaQ [-]
28 Clostridium tetani E88 B/C NC_004557.1 - 1226135 1226391 CTC01153 CTC01152 [COG2873 COG1897]
29 Chlorobium tepidum TLS Ch NC_002932.3 + 606078 606399 cysD met2 [COG2873 COG2021]
30 Bacillus halodurans B/C NC_002570.1 - 3427202 3427581 metK [COG0192]
31 Bacillus subtilis B/C NC_000964.1 + 3997779 3998140 yxjG [COG0620]
32 Listeria monocytogenes strain EGD B/C NC_003210.1 - 1716436 1716857 metK [COG0192]
33 Bacillus subtilis B/C NC_000964.1 + 3996502 3996755 yxjH [COG0620]
34 Listeria monocytogenes strain EGD B/C NC_003210.1 - 1739385 1739673 lmo1681 lmo1680 lmo1679 lmo1678 [COG0620 COG0626 COG0626 COG0646|COG0685]
35 Bacillus subtilis B/C NC_000964.1 - 1180070 1180382 yitJ [COG0646|COG0685]
36 Bacillus subtilis B/C NC_000964.1 - 1257608 1257962 yjcH [COG2382]
37 Listeria monocytogenes strain EGD B/C NC_003210.1 - 637718 638164 lmo0595 lmo0594 [COG2873 COG2021]
38 Staphylococcus aureus subsp. aureus N315 B/C NC_002745.1 + 875326 875574 SA0769 SA0770 SA0771 [COG1135 COG2011 COG1464]
39 Staphylococcus aureus subsp. aureus N315 B/C NC_002745.1 - 1844389 1844759 metK [COG0192]
40 Bacillus halodurans B/C NC_002570.1 - 3590493 3590933 BH3481 BH3480 [COG1135 COG2011]
41 Bacillus halodurans B/C NC_002570.1 - 909950 910271 BH0835 [-]
42 Bacillus halodurans B/C NC_002570.1 + 1699848 1700238 metB metC BH1629 metH [COG0626 COG0626 COG0646|COG0685 COG0646|COG1410]
43 Bacillus subtilis B/C NC_000964.1 - 2024332 2024654 yoaD yoaC [COG0111 COG1070]
44 Clostridium acetobutylicum ATCC824 B/C NC_003030.1 - 2991230 2991501 metK [COG0192]
45 Clostridium acetobutylicum ATCC824 B/C NC_003030.1 - 671177 671507 metH [COG0646|COG1410]
46 Clostridium acetobutylicum ATCC824 B/C NC_003030.1 + 1976292 1976570 metB [COG1897]
47 Staphylococcus aureus subsp. aureus N315 B/C NC_002745.1 - 2381517 2381674 SA2117 [COG1757]
48 Clostridium acetobutylicum ATCC824 B/C NC_003030.1 + 1131346 1131719 CAC0984 CAC0985 CAC0986 [COG1135 COG2011 COG1464]
49 Staphylococcus aureus subsp. aureus N315 B/C NC_002745.1 + 15752 16092 SA0011 [COG2021]
50 Clostridium acetobutylicum ATCC824 B/C NC_003030.1 - 2914619 2914948 cysD [COG2873]

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2  ATTAATCCTCCTTATTTGCAACAGTA------------------------------------------------------
3  AGAACTGTTCTAAAAATATAACTGAAATCTGTTGAGAGCCGCGCTATATGGGAACGATCTCATAAAACATGGCTCTTCTC
4  TCTTTAAAAATTCTTAAATGTTTCTTTCCTTGTGATTTATGTTCTTTCAGTAGAATATAAATCACGGAGGAGAGAAAAAT
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10  TTTACCAATCTCCTTTAAAAATAAAATTAATATAAGAAAATCCGCGATGCCCTTAATAAATAAGAGCGTCGCGGATTTTT
11  TTTCAATTAGGTAATAAAAAAAG---------------------------------------------------------
12  ATAAAAGAATAAAAAAGAGAG-----------------------------------------------------------
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18  AC------------------------------------------------------------------------------
19  TTTCATCGCTCCTCCTACTATGATTGATAATAGTATAACAAACGAATCGTATAATTAATAAACTATCTTTATAAAAATGT
20  AGCAACACCTCAAATATAAAAAATTTATTAG-------------------------------------------------
21  GAAATACCTCTTTCTAAAACAATTCAATGTATAAATGAGCTTATTGTTATTTTATCGTTCCAAGATGGAATTGCAAGACA
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25  AGATACAATCTCCTTTAGATAAGTAAAAC---------------------------------------------------
26  TTTTATTTCAACTCCCCTTTATTTGTGCTAATCTAACCCCACTTTTAATGAA----------------------------
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28  TTGTTAAATTTTTGGGGAGAATTTTTGGGGACGGTT--------------------------------------------
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31  GCCCGCA-------------------------------------------------------------------------
32  AGATACAATCTCCTTTAGTTAAGTAAAACATCTTTTTTATC---------------------------------------
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37  TTTTTATTTCAACTCCCCTTTATTTTTTCTAATTCAACCCCATTTTTAATGA----------------------------
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48  AGATTAGAATTTGATTATTTAGTGTTAG----------------------------------------------------
49  AAATAACTGAAAATCATTGAACAGATATTTAAACTTA-------------------------------------------
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3  ATAAAACCGGTTCGAAAGAACAACACTTAAAAACCCATGAGGGCTTTTGACGTACAACTATACAAATTTCTGGAATAATT
4  GAAAAAACATATTGTTTTAATTGTTGTTGCTTGTATCACGGTCATTGCGGTATTTATGTACATAATTCAAGTCAATAGTA
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10  TTTAATCTGGACTCTTATCTTTCAAGACATACATCTTGCTGGAGGTAGCACCTTTCTAATGGAGATAGAGGTTGCTGA--
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19  TGCGCTGCTTGATTTTTTCGTTCAGTCGAATCGCTTTTTTGCTGCCATTCACCGATCCAACTAACTAGTAAAAGAAAAGT
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21  AAGGAACTAAAATAAGTTCCAAAAACAAATTAATATAGGTAGAGAATCCGTGCTAATATTAACTCCAAAATGCATGACTT
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3  TAAACTCTCCTCTAAACCTTTGAGATGCGTAGAATAGATGTGCTTAGAACAGATGTGTTTAGAACCATTTCTCAATTTTT
4  GCGAACTTAAATATCAAAATAGAGCTCAGATTAAAATAGCCTCT------------------------------------
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19  CCTTTTCTAGAAGCGCTCTAATGCCCAAAAATCTAGAAAAATACTAGGGAATTGGTGAATAGAAGCGCTCTAATAACCAA
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3  CCATTTGTCCGGGGATGTCTTACTCTTGAAAATAGGGGTTCGATTCCAGGTTCTTCAATGCTCCTTTTAAACTCAACATC
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19  GTATCTTATAAAAAGTGTGTGCTGGTTCTTTGCAATAATAGCTCTTGGTTTTCT--------------------------
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3  TTATAAACCATCCTTGTTGATCCTGTGAGCTCCGAATTTGCTTCCATAACCATGATGGGCTTTTCCAGGCGAGCGCTGCA
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3  GTGCCGTCACTTATTAAATGTATAATGATTATTGATTGCTCCTTATAATCCAAGAGTCACTTTTTTGCAGGTCAGGTGAC
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3  GAGTATGTCTCTGCGTTTTTCATCATTAAGCACACCGAAGGTGAAAATCATATACTTTTTACATTTAAGAGACAGTTAAG
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3  AGACAGTCTAAATGAATGAATTCAGAATAATGCTCTCAATCCGTGTAGTTAAAGTTGCATTCGGCCTCGCACTTTTCCTT
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3  TAAGGAATTCTGAAATTCGCCATGAAAGGGATGAAAAATAGTAATATACGAATTCGAACAAATATAAAATTATGGATAAA
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3  GTATATAACTTTGGAAAGTTATATACTTTAGAAAAAAATATAATTGAAATGTAATATGATGGGGGAAAAGCAACGGACCA
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3  GATGCCAGAAAAATGTGGAGAATGCGAAATGTACAGTAGATCCTACGGATTTTGCCTGAGGATAATGGAATACGTTTCTC
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0  ________________________________________________________________________________
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3  CAGACGAAACGGAATTCAGATGCCTGAAAAGTAAAACTGTCCCGGGACAGGAGGCTTTTTAACACTTCAAAATAAGTTTC
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3  TTGTAAGCTCTTCGTCTTTTTAAAAACCTCAACTTTCGTTTATTATGCTTCTCTTTCAAACATATGCTCCATTCTCAAAC
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0  ________________________________________________________________________________
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3  TTTCCTGCGGAGTACACACGCTTTTGACCATTCCGAGGAGAAAACTCTACTTATCCGGAATCATTGCTAATACCCGGAAG
4  --------------------------------------------------------------------------------
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0  ________________________________________________________________________________
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2  --------------------------------------------------------------------------------
3  AAAGATTTTCAAAGCCATTCCTGCATCAGTCACGATCTGAGACTCCACCATCACCATAACGAAGATCAGGTCGAACCCGG
4  --------------------------------------------------------------------------------
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0  ________________________________________________________________________________
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3  AACTTATATCGTACCCTGCGATCACCTTCAATGCCCCGGCTAACGGCCTGCCTGAACTTGAAGATGCCGTTGGTGGAACT
4  --------------------------------------------------------------------------------
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0  ________________________________________________________________________________
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3  CTATACTACCTATCCGCACTCACCGTTTATCCTTATCAGGATTATCTCCGGGATCCCGGAAGACAACTAGCTGAAACGAT
4  --------------------------------------------------------------------------------
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0  ________________________________________________________________________________
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3  AGCAATCGAAATCATGGATAATAGAAAGCAGGATGGAAAACACGCCTTATAACCCAACAATGCAGGCCTCTCGGATGGAT
4  --------------------------------------------------------------------------------
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50  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  TGACAACTTTGAAATAGACGGAGAGCCGGGTATAGAGCAGGGTATGATACATGCAGGGTCGAAAGAACGATAAGAGATAT
4  --------------------------------------------------------------------------------
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50  --------------------------------------------------------------------------------

  
0  ___________________________________________________AAAAACATTCCTCCAGGACATCACTATAC
1  --------------------------------------------------------------------------------
2  ---------------------------------------------------GTTAACTATATTATAATATTAAACCTCTG
3  CAAATTCGAAGAGGTTTTATGCCATCGGCAAATAGATACTTTTACGAATCGAAAATATGTAATCGGGAATATTTTTCTCG
4  ---------------------------------------------------CAGTTAGCTAGCCAGGAAGATTCGGGAGA
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  ---------------------------------------------------------------------------CGTTT
9  --------------------------------------------------------------------------------
10  ---------------------------------------------------AGCGTCAACAGGCCAGGTCCCTTAGCTTC
11  ---------------------------------------------------GAGTTAATTTACCTCCTTTTTTTCTTTAA
12  ---------------------------------------------------GAATTATTAATTAAATATTTTCTCTCTTT
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------TTGGCACCCGTC
16  --------------------------------------------------------------------------------
17  --------------------------------------------------------------------------------
18  ---------------------------------------------------CCAATCCCTCCATACGATAATTTATGTAA
19  ---------------------------------------------------TTCAATTTGCTATATTTTACGATTGGTTA
20  ---------------------------------------------------TTAATGATAAGTATATAGTAATAATATAT
21  ---------------------------------------------------AATGCCCTCAACAGAGCCGAATACTTTAC
22  --------------------------------------------------------------------------------
23  --------------------------------------------------------------------TTGGCACCCGTC
24  --------------------------------------------------------------------------------
25  ---------------------------------------------------ATCTTTTTTATCCATCTATCATACCACAG
26  ---------------------------------------------------ATATAATTAGTCTTAACTATAATAGCCTA
27  --------------------------------------------------------------------------------
28  ---------------------------------------------------AATGAAAATTTGCCATAACAATGGTAAAC
29  --------------------------------------------------------------------------------
30  --------------------------------------------------------------------------------
31  ---------------------------------------------------GTGCGGTTTCGCCTCTACAGAAGAAGGCA
32  ---------------------------------------------------CATCTATCATACCACAGGTTGGAAATAAT
33  --------------------------------------------------------------------------------
34  --------------------------------------------------------------------------------
35  --------------------------------------------------------------------------------
36  --------------------------------------------------------------------------------
37  ---------------------------------------------------AATATAATTAGTCTTAACTATAATAGCCT
38  --------------------------------------------------------------------------------
39  ---------------------------------------------------------------CCTAAATCCCTCCAAAG
40  --------------------------------------------------------------------------------
41  --------------------------------------------------------------------------------
42  --------------------------------------------------------------------------------
43  --------------------------------------------------------------------------------
44  --------------------------------------------------------------------------------
45  ------------------------------------------------------------TTTATAACATCCAATTTATA
46  --------------------------------------------------------------------------------
47  --------------------------------------------------------------------------------
48  ---------------------------------------------------CCTTAAGTAGGTGATATAATTTCCTTTTA
49  ---------------------------------------------------GGTAAACTGTTAGTAATCAGAAAATTCTG
50  --------------------------------------------------------------------------------

  
0  TTTCTTGCATTTTCAATT_AT_____TGT_ACCATG_AATTATT______AG______AAATTTCTCTCTT_TAAACG_G
1  --------------------------------------------------------------------------------
2  GTTATGCAAGTGTTTGCA-CA-----AAA-AAGAAA-TGGAGGA------GC------GGATGAAATTGAA-AATTTT-C
3  GTTGACTTAGGGATATTC-GG-----CAT-TTCTGG-TCATATC------CT------CGAGCCTAGGCAT-TCTGAC-C
4  AAATAGTATTATTAGTGA-AG-----TAA-ATTACA-AATAGAT------GC------GTATAAATAAAAA-AGTTAT-T
5  ----------AAAAATTC-CC-----CCT-CAATCT-TTTGCTT------TA------TTATAACAGAAAT-TAGTAA-T
6  ---------------------------------------AAAAA------TA------ACACTAATATTAG-TGTTAT-T
7  -----------TCTTTGG-AA-----ATC-ATATCA-ATTCATT------GA------ACTTACAGAAAAA-GTTAGT-T
8  CACCTCACACATTCACTTTAT-----TGT-ACCATG-AATTA-----------------ACTTGACATGTT-AAAACT-T
9  --------------------------------------------------------------------------------
10  TCTCGATAAGAAGTATTA-AT-----TTT-TTATAT-ATTCTAA------TA------TATCAATTCATAT-AAGTCA-A
11  TATATTCCCTTTTTAGAT-ATATACATAT-AT-ATGTAATTGGA------TG------CTTATTCTGTCTT-AAATGA-G
12  TTTTTATCAAAATTTGTA-AG-----CAG-CAGGAT-ATTTAAG------TT------TGAAGTGATTTAA-TTTATT-T
13  --------------------------------------------------------------------------AAAA-A
14  ----------------------------------------------------------------------------AT-T
15  CTTTTCAAGTTTCATTGA-TT-----AAA-ATAGTA-AAGTTTT------CT------GAAGTATTTGTCC-AGTATG-A
16  --------------------------------------------------------------------------------
17  --------------------------------------------------------------------------------
18  GCCCTTACATTTAGA--T-AG-----TAT-AACATA-CAG-ATT-------G------AATTTATCCACTT-TAAAATAG
19  TGTTGAGCTTGATTTACA-AC-----CTT-TCACTA-CGAACAA------AA------ATCAGCTTTTCTA-AATTAT-A
20  GTATATCAACTTTTTAAA-GG-----TTA-TTCATT-GTTTATT------TT------TACCTATCCACTA-AATAAA-A
21  ATGTTTTGAAATCTTTAT-GA-----TCT-TTCGTT-CAGCGTA------GT------ACTGCCCGGCTAG-AAGCAC-A
22  ---------------------------------------------------A------AAATTGAATGTAG-ACAAAT-T
23  CTTTTCAAGTTTCATTGA-TT-----AAA-ATAGTA-AAGTTTT------CT------GAAGTATTTGTCC-AGTATG-A
24  ---------------------------------------------------------------AAGAAAAT-AAAAAT-T
25  GATGGAAATAATGATAAG-TG-----AAA-AATAAA-GGAAGGC------AC------TTTTTTACTGTTT-TTTGCA-A
26  AAAAATGGATTTTAAAAC-CT-----TTTTAAAGTG-AAATATT------AGTCTAAAAAACAGCTTTGTC-ACAAAA-A
27  --------------------------------------------------------------------------------
28  TTTCATTAACCGTCCCTT-CT-----ATT-TTCTTC-TATTTTG------AA------AAATAACTATCCAATATTTT-T
29  --------------------------------GGAT-AAGGAGG------AT------GACGACTGTTTTT-ACTGAA-A
30  -------------------------------TTGAC-CATTTTT------TC------GTCATGAATAACA-AGACAA-A
31  ACCTTCTGACAGAGGAGC-AG-----CAA-TGGGCA-AAGCTGC------GC------CATGTCATCGACA-TTGCCA-A
32  GATAAGTGAAAAAATGAA-GG-----AAG-GCAATT-TTCGGCC------AT------TTTTAGCGGGTAG-ATGACT-G
33  --------------------------------------------------------------------------------
34  --------------------------------------------------------------------------------
35  -------------------------------------ATTTTCT------GA------TTCCTATTGATTA-TTGTCT-T
36  --------------------------------------------------------------------------------
37  AAAAAACGAATTTAAAAC-CT-----TTT-AAAAAA-AATTATTCTTTTAAA------AAATACGTCGTTG-TCACAA-A
38  --------------------------------------------------------------------------------
39  CGATAATTTAAATGTAAG-CC-----TTT-ACATTT-AATTAGT------AT------AACACATTAACAT-AATTAA-T
40  ------------------------------ACGAAA-ATTTAAA------CT------ATTTTACTATTGT-TGACAA-G
41  --------------------------------------------------------------------------------
42  --------------------------------------------------------------TCCATTCGC-ACCGTG-A
43  -GGCCCAGTTCCTCTCTC-TA-----GTT-AGATAT-TTTGTAA------GA------ATTATAACATTTC-CGATGA-T
44  --------------------------------------------------------------CCATAAAAG-ACACAC-A
45  AAGTAATTTTCCTAAAGT-CT-----TAA-CTGGAT-AAATGAA------AT------ATCTATAATAAAT-ATATGT-A
46  --------------------------------------------------------------------------------
47  --------------------------------------------------------------------------------
48  AGGCATTATTTTTGAATT-AA---------ATCAT---ATTATT------TA------AATTGGAAATATA-TGAATT-G
49  ATATACAAATCGTCTATG-GT-----ATG-ACTGGG-AATCGTA------TA------CACGAAAGCGATT-TGGCTA-A
50  ---------------------------------------TTGAA------AA------TCTATTGACAGAT-TTATAT-A

  
0  T_TCGGCACACGAA__GAAAAA_______AG___T___G_T__TGA__A__A__T__A___AAC_TGTGAA_T_TG__C_
1  --------------------------------------------------------------------------------
2  T-ATTGACATAAAA--GTAAAA-------AG-------G-T--AGT--ATGA--T--A---AAG-AGTAAA-T-------
3  T-TAGTTTTATAAT--TGTGAA-------TG---C---C-C--ATA--T--A--A--T---CAC-CCCTGT-C-TC--T-
4  G-ACAAAGTGTGAC--GGAAAA-------GG---T---A-ATATGA--A--A-----A---AAC-AAGAAA-C-GT--C-
5  A-AAAGCAAGGGAA--AATTTT-------TT---C---T-T--GAC--T--T--T--A---AAA-TTTCAA-A--G--T-
6  T-TTATTTATGATA--TTATAT-------AT---A---A-T--TGA--C--AGCT--A---AAT-AGTAAT-A-TG--C-
7  A-AAATTAAAATAA--TTAGAA-------AA---T---T-T--AGA--C--T--A--T---TAG-GACGAA-A-TG--C-
8  T-AGAGTATATTAT--AAAATA-------AA---TTAGG-T--TAA--C--C--T--A---AAC-TTTTTA-T-TA--G-
9  --------ACTATT--ATTAAA-------AT---A---T-T--TAA--A--A--T--A---ATA-AGTG---T-TGA-C-
10  C-TCTGTTTTGTAA--GAAAAA-------AT---T---AAT--TGA--C--A-----A---TTC-TATCAACT-TG----
11  T-TTTCAACTAGTA--TCCAAA-------TCCCTT---A-T--TGAC-A--A--T--T---A----GTAAA-A-AC--C-
12  A-TCTGAAATCAAA--GAAAAT-------T----T---A-T--TGA--C--A--T--T---TCT-TACATA-T-TG--A-
13  T-TAATTGACAGTC--CTATAG-------GC---G---C-A--TGC--T--A--A--G---ATA-GGTACA-C-TG--A-
14  A-TTAAAGTCAAAA--AAATAA-------AT---T---G-A--CAA--A--G--T--A---ATT-TTAGAA-T-------
15  T-TTTTTTAAAACT--TAAAAA-------AG---C---A-T--TGACAA--A--T--T---ATC-T-TAAA-A-TG--C-
16  ----------------AATTTT-------TA---T---T-G--ACA--A--G--A--T---TTA-AAATAA-G-AT--A-
17  ---------------------------------------------T--T--A--T--T---GAC-GAAACA-T-TA--G-
18  A-AATAGTGACAAT--GTATAA-------AA---T--------TGAC-A--A--C--A---TAC-TTTGAA-T-TA----
19  A-TAAATTTCACTA--TTGATT-------AT---T---T-T--AAT--G--T--T--A---TCA-GTTAGA-A-TA--T-
20  A-TTTTGTTTTACA--AAATTT-------TT---A---T-T--TTA--C--G--T--G---TTG-CCTGTA-C-AG--T-
21  A-ACTTTTTATTTT--CAAAAA-------AG---T---C-T--TGA--C--A--C--T---ATA-T-TCAA-T-AT--C-
22  A-TTATACAAGTTG--CAAGAA-------TG---C---G-C--AAT--T--A--A--A---TCA-TAGTAG-A-CA--A-
23  T-TTTTTTTAAACT--TAAAAA-------AG---C---A-T--TGA--C--A--A--A---TTA-AGCTAA-TATG--C-
24  T-AATGATTGACAG--TTTTTA-------GT---T---G-C--AAG--T--G--G--T---ATG-ATGATT-T-CA--A-
25  A-TGGAAATCAAGA--CAAAAC-------CG---A---A-T--TTT--T--A--T--T---GCA-TATAGC-C-TC--A-
26  T-TCCACACAC-AA--GTGCTATTTTTGGAC---T---T-T--TTA--A--A--T--ACTTAGT-TGACAA-T-TT--G-
27  --------------------------------------------------------------------------------
28  T-TAATTACTTGAC--TTTTGA-------AA---T---A-A--TTA--A--A--T--A---TA----TAAT-A-TG--C-
29  G-CAGGTAGCAGCG--TCTTGT-------AA---A---A-T--AGT--A--T--C--A---TCT-GTCGTA-G-AT--T-
30  A-GAATGAACATTT--TAATAA-------AC---A---A-T--GAT--T--A--C--C---ATA-TTGACA-C-AG--T-
31  C-GATGTGTGGAGA--TAATCT-------AT---C---A-T--TGA--C--A--G--A---AAT-AGAAAA-TGTG--T-
32  C-TTTATCATAACA--CATAAC-------CG---A---A-T--TAT--T--A--T--T---GCA-TCTGAC-A-CC--A-
33  ------------------------------------------------A--A--A--G---CAT-TGACAA-T-TG--A-
34  ----TGATTGACAG--TTTTTA-------GC---T---G-C--AAG--T--G--G--T---ATG-ATGATT-T-CA--A-
35  T-ATTTTCGGTAAA--TTTGGA-------GA---A---A-G--GGA--A--A--A--A---CGC-CAGATA-T-CT--T-
36  --------------------------------------------------------------------------------
37  T-TCAACACAAAAA--GTACTA-------AT---T---T-T--AGA--C--T--T--T---TTC-AGTACA-T-AG--TT
38  ---------------------------------------------T--T--A--T--T---GAC-GAAATT-T-TA--C-
39  C-TACAATATTTTA--CTGTAA-------AT---T---T-A--TTT--G--T--G--A---AAA-ATTGAC-A-TT--A-
40  G-ACTTTTTACCGT--GATATT-------AT---T---C-T--GAC--A--A--T--G---AACATGCGAA-T-AG--T-
41  ---TCTATTCCCCT--CCATTT-------TT---T---T-C--GTT--C--A--T--A---TGG-ATTGCT-T-TA--T-
42  A-AAAATAAACGAATTGAAAGA-------ATGT-T---G-T--TGC--A--T--T--T---TCG-CTAGAA-T-TG--T-
43  A-ACGTCAATTCTG--AAAAAA-------AG---A---GAT--TGA--C--A--TC-A---ATC-TGAGTC-T-T---C-
44  A-GTGTCTTTTTTT--AAGTTT-------AT---A---T-T--GAC--T--A--A--G---ATT-GTTATA-A-AG--T-
45  T-TTATTATTGTAA--AATTAC-------TG---T---A-T--TGA--C--A--T--T-------TTTTAA-T-TT--A-
46  --------GCAGAT--TTTCTA-------AG---C---G-T--TGAC-A--A--T--T---AAA-AA-GAA-T-TG--T-
47  ---------------------------------------------------T--T--T---ATG-ATTGAC-G-TA--C-
48  CGTATAAAAAAGAC--TAAATT-------CA---T---A-T--TGA--C--A--TTTA---AAT-ATATAC-T-AA--C-
49  C-GTATGACAATGA--TAACAA-------TA---T---T-T--TAA--ATGA--T--A---AAA--GT-AA-T-TCATC-
50  A-AATGATATAATT--TAATCA-------TA---A---A-G--TAA--A--A--T--A---AAC-GATTCA-TATA--T-

  
0  GC_T_AA__T____A_TAA__A__A________CAAT_CA___G________A_AAATTGA____A___A__T_CG___A
1  --------------------------------------------------------------------------------
2  -----AA--T----T-TTA--A-----------CAAT-TT---A--------A-TACTTTA----A---A----------
3  GC-A-AA--T----A-TAA--A--A--------CAAT-CA---G--------A-AAGTTAA----G---G--T-AA---A
4  AC-T-AT--A----G-TCA--C--A---------AAT-GAAGTG--------ATATAATAA----T---A--T-GT---A
5  GA-T-AA--T----A-TAG--ATTA--------CAACGCA---T--------A-AAATTTAATAAA---A--T-GG---C
6  ---T-AA--T----A-TAA--A--T--------TAGT-AA---A--------A-TAATT-A----A---A--T-AA---A
7  AT-T-TC--T----A-CAT--C--A--------CAAT---------------A-CAATTAA----A---T--T-AC---C
8  GA-G-GT--T----T-TAA--T--T--------A----------------------------------------------
9  GT-T-AT--T----G-CAA--A--T--------ATCT-TG---T--------A-ACGTTAA----A---C--A-CA---A
10  ---T-AT--T----A-TTA--T--C--------GTGG-CA---A--------C-AAACTAA----AT--A--A-TG---A
11  G--T-AA--T----AGTAT--G--A--------TAAT-TA--------------AAATTTA----A---T--A-CGCTAA
12  AT-T-AT--T----A-TTC--T--A--------CCAA-CA---------------ACTTTA----T---A--T-AC---G
13  AT-T-AA--T----A-AAA--A--A--------TAAC-CA---T--------T-AAC---A----A---T--A-TG---A
14  GA-T-AC--T----A-TTA--A--A--------AAAA-CA--------------AAATTTA----A--------------
15  GT-A-TA--T----T-TTT--A--A--------CTAA-CA---G--------G-TTTTTCT----A---A--A-AT---A
16  TA-T-AA--T----C-AAA--T--A--------CAAT-AT---A--------A-AAAGTGA----A------T-AA---A
17  TA-C-GA--T----G-GTA--G--G--------ATTA-AT---A--------C-AAATTAA----AT--A--TGCT---T
18  GA-T-AT--T----A-TTA--A--G--------------------------------TTTA----A--------CG---G
19  TA-T-AA--A----G-TTA--A--T--------TTTT-TA---A--------A-AATTTAA----T---A--T-AG---T
20  TA-T-AA--T----G-TGA--T--A--------AAAT-AA--------------ACTTTGA----A---T--T-TA---A
21  T--------T----A-TAA--A--A--------TT-T-CT---A--------T-TAATTAA----A---T--A-TG---A
22  AT-C-GG--A----T-TAA--T--G--------TGGT-TA---T--------A-ATGTATT----A---T--A-TG---A
23  GT-A-TA--T----T-TTT--A--A--------CTAA-CA---G--------G-TTTTTCT----A---A--A-AT---A
24  TC-C-AA--T----T-TAA--G--T--------GATT-AA---A--------A-AAACT-A----A---A--T-AA---A
25  GT-T-TA--T----G-GTA--T--T--------CTAT-CT---T--------A-GAATTAA----A---A--T-T-----
26  TT-T-CA--T----C-CAG--C--G--------TAAT--A---T--------A-TAACTTA----A---T--T-TA---A
27  ---------------------------------------------------------ATAA----C---A--A-CC---T
28  TT-T-AA--A----T-TGA--A--T--------AAAT------------------AATTTA----A---A----------
29  CC-T-GA--A----A-CTT--G--A--------ACGT-TC---T--------T-TTTCAGA----T---T--T-CG---A
30  GC-C-CA--A----T-CTA--C--G--------TTAT-GA---T--------A-TGTCGCG----A---A--C-GG---A
31  GAAT-AA--T----A-GAT--A-----------CTAT-CA---G--------A-AAATTTA----ATAAA--A-AG---G
32  GT-T-TA--T----G-GTA--T--T--------CTAT-CT---T--------A-GAATTAA----A---A--T-T-----
33  TC-C-AA--A----AGTAAT-A--A--------TATT-AA---G--------A-TAATTGA----A---A--T-CTGA-A
34  TC-C-AA--T----T-TAA--G--T--------GATT-AA---A--------A-AAACT-A----A---A--T-AA---A
35  TT-G-GC--A----C-TTC--C--T--------GACA-CG---A--------A-AATTTCA----T---A--T-CC---G
36  --------------------------------------------------------------------------------
37  GA-C-AA--T----T-GAT--G--G--------CATC-CA---GCGTAATATA-TAACTTA----A---T--T-TA---A
38  TA-A-GG--T----G-TTA--G--G--------ATTA-AT---A--------C-AAATTAA----ATG-A--TGCG---T
39  AT-T-CA--T----T-AAT--T--A--------GGTA-CT---A--------T-TATTTTT----A---A--C-GG---A
40  G--T-AA--G----A--AA--A--T--------CTCT-TA---C--------G-AA-TAGT----A---A-----G---A
41  TC-C-CA--T----C-ATT--C--T--------GATA-TG---A--------T-TACTTAA----A---C--T-TC---A
42  TG-T-AA--TTTTTA-TAA--A--A--------AGGT-CT---T--------G-AAAACAA----A---A--T-AG---T
43  TT-T-AT--G----A-TAA--A--CGTATTCTTCATT-CT---G--------A-AAATTAC----A---TACT-CA---A
44  GT-A-TT--A----T-TTA--G--T--------GTGT-AA---T--------A-TAATTGA----A------T-GG---A
45  AC-T-AA--T----A-TAA--T--A--------AAAA-CA--------------AATTT------A---A--T-GT---A
46  AC-T-ATAGT----A-TAATTA--C--------TATT-TA---GTGATA---A-AATTTCA----T---A--T-------
47  TA-A-GG--A----T-TAT--C--T--------TGTA-AC---G--------T-AAACGTA----A---A--T-AA---G
48  TA-T-AA--T----A-TTA--A--A--------TAA---A---G--------A-AATTAAT----A---A--A-TT---A
49  AC-TGAA--T----C-TCA--A--C--------TAA--CA---C--------A-TAAC--A----A---T--T-TC---A
50  GAAT-AG--T----A-GGA--A--A--------AATT-GA---A--------T-ATATTTA----T---------G---A

  
0  _T___A____T____T_T____CTTATCGTGAGA_GGTGGAGGGAC_T_GG_CCCTTA_GAAACCTCAGCAACCGG_CT_
1  -------------------------------------------AAA-G-TA-GCACCT-CTAAATTTCTATTTAAC-CT-
2  -----A----T----C-T----CTTATCAAGAGA-GGTGGAGGGAC-T-GG-CCCGAT-GAAACC-CGGCAACCAG-CC-
3  -G---T----A----A-A----CAACAATTTAAA-ATTATTTACTA-A-TT-TCTGTA-AAACAATCTCAATTTTG-AC-
4  -G---A----A----A-T----CTTATCCAGAGT-GGTGGAGGGAA-A-TG-CCCTGT-GAAACC-CAGCAACCTA-AA-
5  -TCA-A----T----CCT----CTTATCAAGAGT-GGTGGAGGGAC-T-GG-CCCGAT-GAAACC-CGGCAACCGG-CA-
6  -A---A----G----C-T----CTTATCGAGAGA-GGTGGAGGGAA-A-GG-GCCCTATGAAACC-CGGCAACCAA-TA-
7  -T---A----A----C------CTTATTTTGAGA-AGCAGAGGGAT-TTGG-CCCGTA-GAAGCTTCAGCAACCGA-CT-
8  --------------------------------------------------------------------------------
9  -TTCAA----T----A-A----CTTATCAAGAGA-AGTGGAGGGAC-T-GG-CCCAAA-GAAGCTTCGGCAACA----T-
10  -A---A----T----A-T----CTTATCCTGAGA-GGTGGAGGGAAAT-GG-CCCAAA-GAAGCCTCGGCAACAGG-TT-
11  -T---A----T----C-T----CTTATTGAGAGT-GGCTGAGGGAC-T-GG-CCCTGT-GACGCC-CGGCAACCG-----
12  -T---T----T----T-T----CTTATCATGAGA-GGCGGAGGGAAAT-GG-CCCAAC-GAAACCTCGGCAACAGG--T-
13  -T---A----T----C-T----CTTATCTAGAGC-GGTGGAGGGAC-T-GG-CCCTTT-GAAACCGCGGCAACCTT-CA-
14  -T---A----A----A-T----CTTATCAAGAGA-GGTGGAGGGAC-T-GG-CCCTGT-GAAACC-CAGCAACCGG-TAA
15  -T---T----T----TCT----CTTATCGAGAGC-GGCAGAGGGAC-T-GG-CCCGAT-GAAGCC-CGGCAACCTAACT-
16  -A---A----A----A-G----CTTATTAAGAGC-GGTGGAGGGAC-T-GG-CCCTAT-GAAGCC-CGGCAACC------
17  -T---A----A----C-T----CTTATCGAGAGA-GGTGGAGGGAT-G-TG-CCCTAA-GAAGCC-CGGCAACCGT-CT-
18  -A---T----T----C-T----CTTATCCTGAGT-GGTGGAGGGACAT-GG-ACCCAATGAAACC-CAGCAACC------
19  -T---A----G----A------CTTATCAAGAGA-GATGGAGGGAT-T-GG-CCCGAT-GAAGTCTCAGCAACCAG-CC-
20  -T---AAGG-A----T-T----CTTATCAAGAGA-GGCGGAGGGAC-T-GG-CCCTAT-GAAACC-CGGCAACCAA-AA-
21  -C---A----A----T-T----CTTATCCAGAGA-GGTGGAGGGAC-T-GG-CCCAAG-GAAGCCTCGGCAACAGA-CT-
22  -A---A----A----T-A----CTTATCAAGAGA-GGTGGAGGGAC-T-GG-CCCGCT-GAAACCTCAGCAACAGA-AC-
23  -T---T----T----TCT----CTTATCGAGAGC-GGCAGAGGGAC-T-GG-CCCGAT-GAAGCC-CGGCAACCTAACT-
24  -T---T----A----C-T----CTTATTATGAGT-GGTAGAGGGAC-T-GG-CCCGTT-GAAACC-CAGCAACC------
25  -T---A----T----C-T----CTTATCCAGAGC-GGTAGAGGGAC-T-GA-CCCTTT-GAAGCC-CAGCAACCTA-CA-
26  -T---AGTATT----T-T----CTTATCACGAAA-GGTGGAGGGAC-T-GG-CCCTTT-GAAGCCTTAGCAACCGG-AA-
27  -C---C----A----C-T----ACTTTATAATAA-AATTTTACCAT-A-TT-TAAGGA-GGGAGTTGAATTTTTTT-CC-
28  -----A----T----A-T----CTTATCAAGAGC-GGTTGAGGGAC-T-GG-CCCTAT-GAAACC-CAGCAACCTA-TA-
29  -G---C----T----A-T----C--ATCCAGAAA-GGCGGAGGGAC-T-GG-CCCTGC-GAAGCCTTGGCAACC------
30  -T---A----C----T------CTTATCCAGAGTTGGTGGAGGGAC-A-GG-CCCGAA-GAAACCCCAGCAACCAA-CA-
31  -T---T----T----T-C----CTTATCAAGAGA-GGTGGAGGGAC-T-GG-CCCTGC-GATACC-CGGCAACCGC----
32  -T---A----T----C-T----CTTATCCAGAGC-GGTAGAGGGAC-T-GA-CCCTTT-GAAGCC-CAGCAACCTA-CA-
33  -T---A----TGAAGT-TGTACCTTATCAAGAGA-GGTGGAGGGAC-T-GG-CCCTAT-GATACC-CGGCAACCGC----
34  -T---T----G----C-T----CTTATAATGAGT-GGTAGAGGGAC-T-GG-CCCGTT-GAAACC-CGGCAACC----T-
35  -T---------------T----CTTATCAAGAGA-AGCAGAGGGAC-T-GG-CCCGAC-GAAGCTTCAGCAACCGG-TG-
36  --------------------------------------------------------------------------------
37  -T---AGTATT----T-T----CTTATCACGAAA-GGTGGAGGGAC-T-GG-CCCTTT-GAAGCCTTAGCAACCGG-AA-
38  -A---A----A----C-T----CTTATCGAGAGT-GGTGGAGGGAT-G-TG-CCCTAC-GAAGCC-CGGCAACCGT-CT-
39  -T--------T----C-T----CTTATCCTGAGT-GGTGGAGGGACAT-GGACCCAAT-GAAACC-CAGCAACCT--CT-
40  -A---A----A----C-T----CTTA