BLISSBreaker Lab Intergenic Sequence ServerHome

Intergenic view options: Interleaved

NC_000964.1 Bacillus subtilis (- 1257608 to 1257962) circular

Term (99.48)%  --------------------------------CCCCTTCTTCATAAGAAGAAGGGG------------------------
Islands  A.AGC.GACACC..CCC....C,,,,.,,,,,CCCC..C..CA.AAGAAGAAGGGG...AACGC..C..C..A.C..CCA
5'-   ATAGCTGACACCTTCCCTTTTCAAAATAAAAACCCCTTCTTCATAAGAAGAAGGGGTTTAACGCTTCTTCTTATCTTCCA
    |         |         |         |         |         |         |         |       
    1257960   1257950   1257940   1257930   1257920   1257910   1257900   1257890 
    |         |         |         |         |         |         |         |       
3'-   TATCGACTGTGGAAGGGAAAAGTTTTATTTTTGGGGAAGAAGTATTCTTCTTCCCCAAATTGCGAAGAAGAATAGAAGGT
Islands  .A.CGAC.G.GGAAGGG,,,,G....A.....GGGGAAGAAG.A..C..C..CCCC,,,..GCGAAGAAGAA.AGAAGG.
Term (100.00)%  --------------------------------GGGGAAGAAGTATTCTTCTTCCCC------------------------

  
Islands  AGCA.,,,,,,CGC..GC.GGA...AGCACC..GGCGC...GC,,,.GC,,,,CAAGCCGG..GC.GAGG...C.AAGGG
5'-   AGCATAAAAAACGCTTGCTGGATTTAGCACCTTGGCGCTTTGCAAATGCAAAACAAGCCGGTTGCTGAGGTTTCTAAGGG
    |         |         |         |         |         |         |         |       
    1257880   1257870   1257860   1257850   1257840   1257830   1257820   1257810 
    |         |         |         |         |         |         |         |       
3'-   TCGTATTTTTTGCGAACGACCTAAATCGTGGAACCGCGAAACGTTTACGTTTTGTTCGGCCAACGACTCCAAAGATTCCC
Islands  .CG.A......GCGAACGACC.,,,.CG.GGAACCGCG,,,CG...ACG....G..CGGCCAACGAC.CC,,,GA..CCC

  
Islands  CCAG.CCC.CCACC.C.CACGA.AAG,,,.A.CGA...CAA....C.GA..G....A.A..AGCGCAA..CACAG...A.
5'-   CCAGTCCCTCCACCTCTCACGATAAGAAATATCGATTTCAATTTTCTGATTGTTTTATATTAGCGCAATTCACAGTTTAT
    |         |         |         |         |         |         |         |       
    1257800   1257790   1257780   1257770   1257760   1257750   1257740   1257730 
    |         |         |         |         |         |         |         |       
3'-   GGTCAGGGAGGTGGAGAGTGCTATTCTTTATAGCTAAAGTTAAAAGACTAACAAAATATAATCGCGTTAAGTGTCAAATA
Islands  GG.CAGGGAGG.GGAGAG.GC.A..C...A.AGC.,,,G..,,,,GAC.AAC,,,,.A.AA.CGCG..AAG.G.C,,,.,

  
Islands  ..CAACAC......C..CG.G.GCCGAACCG...,,,GAGAG,,,...C.AA.AA..CA.GG.ACAA.AA..G,,,,.GC
5'-   TTCAACACTTTTTTCTTCGTGTGCCGAACCGTTTAAAGAGAGAAATTTCTAATAATTCATGGTACAATAATTGAAAATGC
    |         |         |         |         |         |         |         |       
    1257720   1257710   1257700   1257690   1257680   1257670   1257660   1257650 
    |         |         |         |         |         |         |         |       
3'-   AAGTTGTGAAAAAAGAAGCACACGGCTTGGCAAATTTCTCTCTTTAAAGATTATTAAGTACCATGTTATTAACTTTTACG
Islands  ,,G..G.G,,,,,,GAAGCACACGGC..GGC,,,...C.C.C...,,,GA..A..AAG.ACCA.G..A..AAC....ACG

  
Islands  AAG,,,G.A.AG.GA.G.CC.GGAGGAA.G.....
5'-   AAGAAAGTATAGTGATGTCCTGGAGGAATGTTTTT
    |         |         |         |  
    1257640   1257630   1257620   1257610   
    |         |         |         |  
3'-   TTCTTTCATATCACTACAGGACCTCCTTACAAAAA
Islands  ..C...CA.A.CAC.ACAGGACC.CC..AC,,,,,

IGR  -   1257608  1257962  ()  24  yjcH

Blast Hits

ID Organism Class Accession Start End Operon
0 Bacillus subtilis B/C NC_000964.1 - 1257608 1257962 yjcH [COG2382]
1 Staphylococcus epidermidis ATCC 12228 B/C NC_004461.1 + 402422 402540 SE0408 [COG1321]
2 Listeria innocua Clip11262 B/C NC_003212.1 + 327107 327488 lin0314 [COG0436]
3 Listeria innocua Clip11262 B/C NC_003212.1 - 1446186 1446352 lin1445 [COG1695]
4 Oceanobacillus iheyensis B/C NC_004193.1 - 726566 727206 OB0690 [-]
5 Oceanobacillus iheyensis B/C NC_004193.1 + 3200452 3200962 OB3079 [COG0431]
6 Thermoanaerobacter tengcongensis strain MB4T B/C NC_003869.1 + 1750207 1750551 GlgP [COG0058]
7 Thermoanaerobacter tengcongensis strain MB4T B/C NC_003869.1 + 2076498 2076819 TTE2154 [COG1773]
8 Oceanobacillus iheyensis B/C NC_004193.1 + 1097834 1098421 OB1055 [COG0491]
9 Bacillus subtilis B/C NC_000964.1 - 1249976 1250126 cotY [-]
10 Chlorobium tepidum TLS Ch NC_002932.3 - 606078 606399 sun xerD [COG0144 COG4974]
11 Listeria monocytogenes strain EGD B/C NC_003210.1 + 309156 309537 lmo0286 [COG0436]
12 Listeria innocua Clip11262 B/C NC_003212.1 + 1772247 1772656 lin1774 [-]
13 Listeria innocua Clip11262 B/C NC_003212.1 + 636706 637152 lin0605 [COG3247]
14 Bacillus subtilis B/C NC_000964.1 + 2690714 2690910 yqaP [-]
15 Staphylococcus epidermidis ATCC 12228 B/C NC_004461.1 + 1508405 1508773 SE1459 [COG1866]
16 Clostridium tetani E88 B/C NC_004557.1 + 2676797 2677154 CTC02521 [COG0446]
17 Listeria monocytogenes strain EGD B/C NC_003210.1 + 1716436 1716857 lmo1665 [-]
18 Bacillus halodurans B/C NC_002570.1 + 909950 910271 BH0836 BH0837 [COG0212 COG1670]
19 Bacillus subtilis B/C NC_000964.1 + 1257608 1257962 yjcI yjcJ [COG0626 COG0626]
20 Bacillus subtilis B/C NC_000964.1 + 2024332 2024654 yoaE [COG0243]
21 Listeria monocytogenes strain EGD B/C NC_003210.1 + 637718 638164 lmo0596 [COG3247]
22 Staphylococcus aureus subsp. aureus N315 B/C NC_002745.1 + 1844389 1844759 pckA [COG1866]
23 Clostridium acetobutylicum ATCC824 B/C NC_003030.1 + 671177 671507 prkA CAC0580 spoVR [COG2766 COG2718 COG2719]

0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  CTTTTTTTCCTCCCTAGTATGTTGATTATTT-------------------------------------------------
3  A-------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  TTTC----------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  TTTGCACC------------------------------------------------------------------------
8  GTTAATTTCCTTCTTTCTCCTTTAGATTTGGGCTAGTCTTATAGAGTAGGGTCTTGCTCTATGAAACTAGCATATGAC--
9  --------------------------------------------------------------------------------
10  GGCAAATGGTACAAGGTTGAAGCGCTCGATCCGTA---------------------------------------------
11  CTTTTTTCCTCCCTAGTATGTTGTGTGATT--------------------------------------------------
12  TTTTATTTTCCTCCTTTAGTTCTCTCCAAATACGTCTCAT----------------------------------------
13  AAAATCCACTCCTCTTTAATATGTATTTATCAGTAATTTCC---------------------------------------
14  --------------------------------------------------------------------------------
15  CATTTTCTCCTTTAAATAAATTACGAA-----------------------------------------------------
16  --------------------------------------------------------------------------------
17  TTTTATTTTCCTCCTTCAATTCTCTCCAAATACGTCTCAT----------------------------------------
18  GTACAACGCCTCCTCATTCCAAGTTGTTCTTTTTTTGTCTTGCTGTTTTCGGTACAATAACAAGTAATCT----------
19  AAAAACATTCCTCCAGGACATCACTATACTTTCTTGCATTTTCAATTATTGTACCATGAATTATTAGAAATTTCTCTCTT
20  --------------------------------------------------------------------------------
21  AAAATCCACTCCTCTTTGATATGTATTTATCAGTAATTTCC---------------------------------------
22  AGTTTGCTCCTTTAAATTTATATTAC------------------------------------------------------
23  AAGT----------------------------------------------------------------------------

  
0  ________________________________________________________________________________
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17  --------------------------------------------------------------------------------
18  --------------------------------------------------------------------------------
19  TAAACGGTTCGGCACACGAAGAAAAAAGTGTTGAAATAAACTGTGAATTGCGCTAATATAAAACAATCAGAAAATTGAAA
20  --------------------------------------------------------------------------------
21  --------------------------------------------------------------------------------
22  --------------------------------------------------------------------------------
23  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
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17  --------------------------------------------------------------------------------
18  --------------------------------------------------------------------------------
19  TCGATATTTCTTATCGTGAGAGGTGGAGGGACTGGCCCTTAGAAACCTCAGCAACCGGCTTGTTTTGCATTTGCAAAGCG
20  --------------------------------------------------------------------------------
21  --------------------------------------------------------------------------------
22  --------------------------------------------------------------------------------
23  --------------------------------------------------------------------------------

  
0  ___________________________ATAGCTGACACCTTCCCTTTTCAAAAT_AAAAAC__CCC_T_TCT______TC
1  --------------------------------------------------------------------------------
2  ---------------------------ATCCAGATTTATTCATGAAAGCAATAA-AAAAAC--TTC-TCTAT------TT
3  ---------------------------ATACAACTACACTTCCCTTTCCAAAAT-AAAACT--CAA-C-TAT------TA
4  -----------------------------AATAATCTCCTCCTATTCTAAAAATCAAAAAA--CCC-C-TCT------TC
5  ---------------------------ATCCCCCATTATCTATCGTTAGTAATT-AAAAAA--CCC-T-T-T------TC
6  -----------------------------TTAATGCCCCTCCTTTTTTAAAAAT-AAAAAA--GTC-C--CT------TC
7  ---------------------------TCCAGAAAAATTCTTAGGCCCTCTTCA-ATGAGA--AGA-G-GGC------CT
8  ---------------------------AGTTCTGTACAGAGAATAGGGAAAAGT-AAAAAC--CCCCT-TCT------AC
9  ----------------------------------------------------------------GA-C-CTA------AA
10  ---------------------------GTGCGCGGTCGGGGTCAGGAGGTATGT-GCGGGA--AGC-A-TCA------AG
11  ---------------------------ATCCAGATTTATTCATGAAAGCAATAA-AAAAACTTCTC-T-ATT------TT
12  ---------------------------ATAAAAAGCCTCTCTCTATTTTGCACG-AAACGC--GCA-C-GAA------TA
13  ---------------------------ATCAAAAAACCTCCCTAGCAGTATATA-AGCCGC--CAG-A-GAG------GA
14  -------------------------------GAAAGTATCCTCCTTTTCAAAAT-AAAAAC--GGA-C-ACC------AA
15  ---------------------------AATTCTCTTTAAATATGAGAGCTAAAT-AAAAGA--GCC-T-TCT------TC
16  ------------------------------------------CTTTAATTATAA-AAAAAC--TTC-T-TGC------AG
17  ---------------------------ATAAAAAGCCTCTCTCTATTTTGCACA-AAACGC--GCA-C-GAA------TA
18  ---------------------------TTCCGACAGATAAGGTGTTAAAACAAG-AAAAAA--CAC-C-TCT------TC
19  CCAAGGTGCTAAATCCAGCAAGCGTTTTTTATGCTTGGAAGATAAGAAGAAGCG-TTAAAC--CCC-T-TCT------TC
20  ---------------------------------------AAAAAAAATCTCTTT-CCGAAG--ATG-G-AAA------GA
21  ---------------------------ATCAAAAAACCTCCCTAGCAGTATATA-AGCCGC--CAG-A-GAG------GA
22  ---------------------------GAAAATTCTCTCTCTGTGAGCTAAATA-AAAAAG--ACC-T-TCTAACTATTA
23  ---------------------------TAGCCCCCTTAAAAAATAGGATAAAAT-AAAAAG--CCC-T-TGG------AA

  
0  _____A_____TA___AGA_AGAA__GGG____G____TTTAA_____C_______G__C____T______T____CT_T
1  --------------------------------------------------------------------------------
2  -----A-----GA---ATAGAGAA--GTG----GAAAGTCGAA-----CATATCCAG--C----T------C----CT--
3  -----T-----AT---TAC-GCTT--GAT----A----AATAC-----C-------A--A----T------G----TC-A
4  -----TAAAAGTA---AGA-AGAA--GGG----T----TAAAA-----T-------A--C----A------TAGCTCT-T
5  -----A-----TAAAGATA-AGAAAAGAG----C----TCTGT-----C-------G--CCGACT------T----CT--
6  -----G-----CT---AAA-AGAA--GAG----A----CTACA-----A-------G--A----A------T----CT--
7  -----A-----GT---AAT-CACA--ATT----A----CTCGG-----C-------C--T----C------T----CC-T
8  -----AAG---TA---AGA-AGAG--GGTACA-G----GAAAC-----C-------GTAC----TATATACT----CT-T
9  -----A-----GC---AGA-GCTA--AAA----A----CGCTC-----T-------G--C----T------T----TT-T
10  -----T-----GA---GGT-ATGA--AAT----C----AGCAG-----G-------A--A----T------G----CA-T
11  -----A-----GA---ATAGAGAA--GTGGAAAG----TCGAA-----CATATCCAG--C----T------C----CT--
12  -----G-----AG---AAA-GGCT--ATA----A----TTATA-----C-------C--T----T------T----GC-T
13  -----T-----AG---AGT-TTCC--TAA----A----CTTGG-----A-------T--T----T------C----CG-A
14  -----A-----CA---TAC-AGCG--TAA----T----ACTGT-----A-------A--G----T------T----CA-G
15  ACTATA-----TAGATAGAGAGAA--GGC----T----CTTAAACGT-C-------C--A----T------T----CGCT
16  -----A-----TA---AAA-GCAA--GAA----G----TTTATATTC-C-------T--C----T------A----CG-T
17  -----G-----AG---AAA-GGCT--ATA----A----TTATA-----C-------C--T----T------T----GC-T
18  G----A-----TA---AGA-AGAC--GTG----C----GATC------C-------G--T----T------CG---CT-T
19  -----T-----TA---TGA-AGAA--GGG----G----TTTTT-----A-------T--T----T------T----GA-A
20  -----G-----AT---TCA-TATA--TAG----G----CGCGC-----T-------C--T----G------T----TA-C
21  -----T-----AG---AGT-TTCC--TAA----A----CTTGG-----A-------T--T----T------C----CG-A
22  -----A-----TAT--AGAGAGAA--GGC----C----TAATA-----C-------G--TCCA-T------T----CGCT
23  -----A-----TA---ACC-TC----GGG----C----TTTACATTCGC-------G--A----T------T----AT-T

  
0  CTTATC_TTCCA_AG_C___ATAAAAAAC_GCT__T__G_CTGGAT_TTAGCACCTTGGCGCTT__TGCAAATG_CAAAA
1  --------------------------------------------------------------------------------
2  CTTATC-TACCA-AAAC---GGAATACAC-CAT--TTTG-CTGGAA-TTAGCACCTT--CACTT--TACGCTT---AAAT
3  ATATTT-ACATA-TA-T---AATTTATTA-CAT--A--T-CTAACG-ATTTTACTTATTGATGT--TTATCGCT-TACAA
4  CTTATC-TTTAA-GG-C---TTGTAA----GCC--T--A-TTGGAA-TTAGCACCATACC--TT--ATCTAG--------
5  CTTATC-TACCA-AG-C---ATAGAATAC---T--T--G-ATGGAT-TTGGCACAGTA--------TTCAA--G-CTAGA
6  CTCATC-TTTCA--G-C---G---AAACC-GCT-----G-CAGGAA-TTGGCACCATGCC--------CTAAGG-CT---
7  CTCATC-TCTCA-GG-CTGGGTAACCCCA-ACC--T--G-CAGGAA-TTGGCACCAAG-CACTT---------------A
8  CTCATC-TTCTA--G-C---A---ATTAC-GCT--A----CTGGAA-TTGGCACAGTA---CTT------AATC---AAA
9  CTTATT-TTCCA-AG-C---ATATGATGA-ATA--T--A-TAGACG-TTCACCCACACCAAGTG--GGGCACGG-GTACA
10  ACATCA-TCTTT-CC-C---GGATTTCCT-CCG--G--G-ATGGAT-TTGGCACC---GCTCAT--GTGGAATG-AA---
11  CTTATC-TACCA-AAAC---GGAATACAC-CATTTT--G-CTGGAA-TTAGCACCTTCACTTTA--TGCTTAAA-TAAAG
12  CTCATC-GTTCA-GG-----AGATATTAC-TCC--T--G-CAACAGATTAGCACCTTT-CACTT-----ATATG-TGTA-
13  CTTATC-TTTCA--G-A---ATATAC---------T--G-CTGGAA-TTAGCACCGTGA----------AAAT------A
14  TGTCCG-CAGGC-TT-T---CCGTCTTGG-ACT--A--A-CTGGAT-ATTTTATGCTTTAATGA--ATTCACAT-TACCT
15  CTTATCGTTCAG-AC-C---ATATTTGTCTGCA--A--A-CGG--T-TTGGCACCTTT---CTT--T--AAAT----AAA
16  CTTATC-TGTCA-GG-T---TTCA-------CC--T--G-CTGGAA-TTGGCACCTTA-----------AAATT-ATTAT
17  CTCATC-GTTCA--G-A---AGATAATAC-TCC--T--G-CAACAGATTAGCACCTTT-CACTT-----ATATG-TGTA-
18  CTTATC-TTTCAGAA-C---ATCATGTTC------T--G-CTGGAA-TTGGCACCTT----CTT--T---------AAAA
19  AAGGGA-AGGTG-TC-A---GCTAT-------------------------------------------------------
20  AGGCAG-ACGCC-GG-T---ATAAACCTT-GCT--T--T-CCT-AT-CTTTCAAGCTAGCGCTTGCTGGAATTGGCACAA
21  CTTATC-TTTCA--G-A---ATATAC---------T--G-CTGGAA-TTAGCACCGTGA----------AAAT------A
22  CTTATC-GTTCA-GA-C---CTAT--------T--T--GTCTGCA----AACGGTTTGGCACCT--TTCTTTTA-TAAAA
23  CTCATC-TATCA--G-C---GTTT------GCT-----G-CAGGAT-TTAGCACCACATATATT-----AAA-----AAA

  
0  CAAGCC_GGTTGCTGAGGTTTC_TAAGGGCCA_GT_CCCTCCACCTCTCACGATAAGA_A_A____T__ATCGAT_TT__
1  --------------------------------------------------------------------------------
2  AAAGTTAGGTTGCCG-GGCTTC-ATCGGGCCA-GT-CCCTCTGCCGCTCTCGATAAGAGA-A----A--ATATTT-TA--
3  TAAGGT-TAAATAGAAATTTAG-AGGTGCTAC-TT-T-------------------------------------------
4  ---GCT-GGTTGCTGAGACTTC-ATCGGGCCA-AT-CCCTCCATCTCTCTTGATAAGT-C------T--AACTAT-AT--
5  A---CC-TGTTGCCGAGGCTTC-TTTGGGCCA-TTTCCCTCCACCTCTCAGGATAAGA-T-A----T--TTCATTATT--
6  -------GGTTGCCG-GGTTTC-ATCGGGCCA-GT-CCCTCCACCTCTCTTGATAAGA-G-A----T-------T-TT--
7  CGTGCC-GGTTGCCG-GGTTTC-ATCGGGCCA-GT-CCCTCCACCACTCTTGATAAGA-GGA----TTGAGCCAT-TTTA
8  TAAGTC-TGTTGCCGAGGCTTC-CTTGGGCCA-GT-CCCTCCACCTCTCTGGATAAGA-A-T----T--GTCATA-TT--
9  TATGTT-GTTAAGGACTAAAGT-CAAATACCC-TA-TAAAGAAGGAGCTGAAATCA------------------------
10  -------GGTTGCCAAGGCTTC-GCAGGGCCA-GT-CCCTCCGCCTTTCTGGAT--GA-T-A----G--CTCGAA-AT--
11  TTAG----GTTGCCG-GGCTTC-ATCGGGCCA-GT-CCCTCTGCCGCTCTCGATAAGAGA-A----A--ATATTT-TA--
12  -------GGTTGCTG-GGCTTC-AAAGGGTCA-GT-CCCTCTACCGCTCTGGATAAGA-G-A----T--AA--AT-TT--
13  AATTCC-GGTTGCTAAGGCTTC-AAAGGGCCA-GT-CCCTCCACCTTTCGTGATAAGA-A-AATACT--ATTAAA-TT--
14  AAGGAA-AAAAATTCAACTCCC-TCCTTAAAT-AT-GGTAAAATTTTATTATAAAGTA-G-T----G--GAGGTT-GT--
15  GA-----GGTTGCTG-GGTTTCATTGGGTCCATGT-CCCTCCACCACTCAGGATAAGA-G-A-------ATCCGT-TA--
16  TTTT---GGTTGCCG-GGTTTC-ATAGGGCCA-GT-CCCTCCGCCTCTCTTGATAAGA-A-TCCT-T--ATTAAA-TT--
17  -------GGTTGCTG-GGCTTC-AAAGGGTCA-GT-CCCTCTACCGCTCTGGATAAGA-G-A----T--AA--AT-TT--
18  AAAGA--GGTTGCCG-GGCTTC-ACAGGGCCA-GT-CCCTCCACCACTCTGGATAAGA-A-AA---T--ATGAAG-TT--
19  --------------------------------------------------------------------------------
20  TAAT----GTTGCCGAGGTTTC-ATAGGGCCA-GT-CCCTCCACCTCTCTGGATAGAA-A-A----T--ATTGAG-TATG
21  AATTCC-GGTTGCTAAGGCTTC-AAAGGGCCA-GT-CCCTCCACCTTTCGTGATAAGA-A-AATACT--ATTAAA-TT--
22  AAAGA--GGTTGCTG-GGTTTCATTGGGTCCATGT-CCCTCCACCACTCAGGATAAGA-G-A-------ATCCGT-TA--
23  TATACT-GGTTGCCG-GGTTTC-AAAGGGCCA-GT-CCCTCCACCACTCTTGATAAGA-T-T----T--TTACAT-TA--

  
0  __CAATTTT________CTGA_TTGT________TTTATATTAGCG_CA_A_TTCACAGTT___TAT__T_T__CAA_C_
1  ------------------------TA--------ATTAAAACCTCC-TA-A-TAAAAAGTT---TAG--G-T--TAA-CC
2  --GAAAAAC--------CTGT-TAGT--------TAAAAATATACG-CA-T-TTTA-AGAT---AAT--T-TGTCAA-T-
3  --------------------------------------------------------------------------------
4  --TAAATTT--------TTAA-AAAA--------TTAACTTTATAA-TA-T-TCTAACTGA---TAA--C-A--TTA-A-
5  --TAGTTTG--------TTGC-CACG--------ATAATAATA----CA-AGTTGATAGAA---T-T--G-T--CAA-TT
6  --AAAGTAT--------TAAA-TTGT--------TAAA-ATTA---------TTTACTCTT---TATCAT-A--CTA-C-
7  TTAAATTTT--------ATGCGTTGTAA------TCTATATTATCA-CT---TTGAAATTT---TAA--A-G--TCA-A-
8  --TAATTAA--------TAGA-AA-T--------TTTATAAGAT------A-TTGA-ATAT---AGT--G-T--CAA-G-
9  --------------------------------------------------------------------------------
10  --CTGAAAA--------AGAA-CGTT--------CAAGTTTCAGGA-AT-C-TACGACAGA---TGA--T-A--CTA-T-
11  --GAAAAAC--------CTGT-TAGT--------TAAAAATATACG-CATA-TTAGCTTAA---TTT--G-T--CAA-T-
12  --TAATTCT--------AAGA-TAGA--------ATACCATAAACT-GA-G-GCTATATGC---AAT--A-A--AAA-T-
13  --AAGTTAT--------AT-A-TTAC--------GCTGGATGAAAC-AA-A-TTGTCAACTAAGTAT--T-T--AAA-A-
14  --TAT---------------------------------------------------------------------------
15  --AACTTA-----------------------------ATAATATCT--A-A-TTCAAAGTA---TGT--TGT--CAA-T-
16  --CAAAGTT--------T--A-TTTT--------ATCACATTATAA-CT-G-TACAGGCAA---CAC--G-T--AAA-A-
17  --TAATTCT--------AAGA-TAGA--------ATACCATAAACT-GG-T-GTCAGATGC---AAT--A-A--TAA-T-
18  --TAAGTAA--------TCAT-ATCA--------GAATGATGGGAA-TA-A-AGCAATCCA---TAT--G-A--ACG-A-
19  --------------------------------------------------------------------------------
20  --TAATTTT--------CAGA-ATGAAGAATACGTTTATCATAAAG-AAGA-CTCAGA-TT---GAT--G-T--CAATC-
21  --AAGTTATATATTACGCTGG-ATGC--------CATCAATTGTCAACT-A-TGTACTGAA---AAA--G-T--CTA-A-
22  --AAAATAA--------TAGT-ACCT--------AATTAATGAATT-AA-T-GTCAATTTT---TCA--C-A--AAT-A-
23  ---AATTT-----------GT-TTTT--------ATTATATTAGTT-AA-A-TTAAAAA------AT--G-T--CAA-T-

  
0  __ACT_______TTTTTCTTCGTGTGCCGAACCGTTT_AAAGAGAGAAATTT______CT______AATAATTCATGGTA
1  TAATT-------TATTTTATAATATACTCTAAAGTTT-TAACATGTCAAGTT-----------------AATTCATGGTA
2  --GCT-------TTTTTAAGTTTTAAAAAAATCATAC-TGGACAAATACTTC------AG------AAAACTTTACTATT
3  --------------------------------------------------------------------------------
4  --AAT-------AATCAATAGTGAAATTTATTATAAT-TTAGAAAAGCTGAT------TT------TTGTTCGTAGTGAA
5  --AAT-------TTTTTCTTACAAAACAGAGTTGACT-TATATGAATTGATA------TA------TTAGAATATATAAA
6  ---CT-------TTTTACTTTTATGTCAATAGAAAAT-TTTCAATTTCATCC------GC------TCCTCCATTTCTTT
7  --GAA-------AAAATTTTCCCTTGCTTTTATTACT-AATTTCTGTTATAA------TA------AAGCAAAAGATTGA
8  --ACT-------TTTTTGAAAATAAAAAGTTTGTGCT-TCTAGCCGGGCAGT------AC------TACGCTGAACGAAA
9  --------------------------------------------------------------------------------
10  --TTT-------ACAAGACGCTGCTACCTGCTTTCAG-TAAAAACAGTCGTC------AT------CCTCCTTATCC---
11  --GCT-------TTTTTAAGTTTAAAAAAAATCATAC-TGGACAAATACTTC------AG------AAAACTTTACTATT
12  --TCG-------GTTTTGTCTTGATTTCCATTTGCAA-AAAACAGTAAAAAA------GT------GCCTTCCTTTATTT
13  --AGTCCAAAAATAGCACTT-GTGTGTGGAATTTTTG-TGACAAAGCTGTTTTTTAGACT------AATATTTCACTTTA
14  --------------------------------------------------------------------------------
15  ----T-------TTATACATTGTCACTATTTCTATTTTAAAGTGGATAAATT------C-------AATCTGT-ATGTTA
16  --TAA-------AAATTTTGTAAAACAAAATTTTTAT-TTAGTGGATAGGTA------AA------AATAAACAATGAAT
17  --TCG-------GTTATGTGTTATGATAAAGCAGTCA-TCTACCCGCTAAAA------AT------GGCCGAAAATTGCC
18  --AAA-------AAATGGAGGGGAATAGA---------------------------------------------------
19  --------------------------------------------------------------------------------
20  --TCT-------TTTTTTCAGAATTGACGTTATCATC-GGAAATGTTATAAT------TC------TTACAAAATATCTA
21  --AAT-------TAGTACTTTTTGTGTTGAATTTGTG-ACAACGACGTATTT------TTTAAAAGAATAATTTTTTTTA
22  --AAT-------TTACAGTAAAATATTGTAGATTAAT-TATGTTAATGTGTT------AT------ACTAATTAAATGTA
23  --ACA-------GTAATTTTACAATAATAAATACATA-TATTTATTATAGAT------AT------TTCATTTATCCAGT

  
0  CAATAAT_TG_AAAATGCAAGAAAGTATAGTGATGTCCTGGAGGAATGTTTTT___________________________
1  CAATAAAGTG-AATGTGTGAGGTGAAACG---------------------------------------------------
2  TTAATCA-AT-GAAACTTGAAAAGGACGGGTGCCAA--------------------------------------------
3  --------------------------------------------------------------------------------
4  AGGTTGT-AA-ATCAAGCTCAACATAACCAATCGTAAAATATAGCAAATTGAAAGAAAACCAAGAGCTATTATTGCAAAG
5  AAATTAA-TA-CTTCTTATCGAGAGAAGCTAAGGGACCTGGCCTGTTGACGCTTCAGCAACCTCTATCTCCATTAGAAAG
6  TTTGTGC-AA-ACACTTGCATAACCAGAGGTTTAATATTATAATATAGTTAACTACTGTTGCAAATAAGGAGGATTAAT-
7  GGGGGAA-TT-TTT------------------------------------------------------------------
8  GATCATA-AA-GATTTCAAAACATGTAAAGTATTCGGCTCTGTTGAGGGCATTTAAGTCATGCATTTTGGAGTTAATATT
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  TTAATCA-AT-GAAACTTGAAAAGGACGGGTGCCAA--------------------------------------------
12  TTCACTT-AT-CATTATTTCCATCCTGTGGTATGATAGATGGATAAAAAAGATGTTTTACTTATCTAAAGGAGATTGTAT
13  AAAAGGT-TTTAAAATCCATTTTTTAGGCTATTATAGTTAAGACTAATTATATTTCATTAAAAGTGGGGTTAGATTAGCA
14  --------------------------------------------------------------------------------
15  TACTATC-T---AAATGTAAGGGCTTACATAAATTATCGTATGGAGGGATTGGGT-------------------------
16  AACCTTT-AA-AAAGTTGATATACATATATTATTACTATATACTTATCATTAACTAATAAATTTTTTATATTTGAGGTGT
17  TTCCTTC-AT-TTTTTCACTTATCATTATTTCCAACCTGTGGTATGATAGATGGATAAAAAAGATGTTTTACTTAACTAA
18  --------------------------------------------------------------------------------
19  --------------------------------------------------------------------------------
20  ACTAGAG-AG-AGGAACTGGGCC---------------------------------------------------------
21  AAAGGTT-TT-AAATTCGTTTTTTAGGCTATTATAGTTAAGACTAATTATATTTCATTAAAAATGGGGTTGAATTAGAAA
22  AAGGCTT-AC-ATTTAAATTATCGCTTTGGAGGGATTTAGG---------------------------------------
23  TAAGACT-TT-AGGAAAATTACTTTATAAATTGGATGTTATAAA------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  AACCAGCACACACTTTTTATAAGATACTTGGTTATTAGAGCGCTTCTATTCACCAATTCCCTAGTATTTTTCTAGATTTT
5  GTGCTACCTCCAGCAAGATGTATGTCTTGAAAGATAAGAGTCCAGATTAAAAAAAATCCGCGACGCTCTTATTTATTAAG
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  AGCACGGATTCTCTACCTATATTAATTTGTTTTTGGAACTTATTTTAGTTCCTTTGTCTTGCAATTCCATCTTGGAACGA
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  CT------------------------------------------------------------------------------
13  CAAATAAAGGGGAGTTGAAATAAAA-------------------------------------------------------
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------
16  TGCT----------------------------------------------------------------------------
17  AGGAGATTGTATCT------------------------------------------------------------------
18  --------------------------------------------------------------------------------
19  --------------------------------------------------------------------------------
20  --------------------------------------------------------------------------------
21  AAATAAAGGGGAGTTGAAATAAAAA-------------------------------------------------------
22  --------------------------------------------------------------------------------
23  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  TGGGCATTAGAGCGCTTCTAGAAAAGGACTTTTCTTTTACTAGTTAGTTGGATCGGTGAATGGCAGCAAAAAAGCGATTC
5  GGCATCGCGGATTTTCTTATATTAATTTTATTTTTAAAGGAGATTGGTAAA-----------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  TAAAATAACAATAAGCTCATTTATACATTGAATTGTTTTAGAAAGAGGTATTTC--------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------
16  --------------------------------------------------------------------------------
17  --------------------------------------------------------------------------------
18  --------------------------------------------------------------------------------
19  --------------------------------------------------------------------------------
20  --------------------------------------------------------------------------------
21  --------------------------------------------------------------------------------
22  --------------------------------------------------------------------------------
23  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  GACTGAACGAAAAAATCAAGCAGCGCAACATTTTTATAAAGATAGTTTATTAATTATACGATTCGTTTGTTATACTATTA
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------
16  --------------------------------------------------------------------------------
17  --------------------------------------------------------------------------------
18  --------------------------------------------------------------------------------
19  --------------------------------------------------------------------------------
20  --------------------------------------------------------------------------------
21  --------------------------------------------------------------------------------
22  --------------------------------------------------------------------------------
23  --------------------------------------------------------------------------------

  
0  ___________________________
1  ---------------------------
2  ---------------------------
3  ---------------------------
4  TCAATCATAGTAGGAGGAGCGATGAAA
5  ---------------------------
6  ---------------------------
7  ---------------------------
8  ---------------------------
9  ---------------------------
10  ---------------------------
11  ---------------------------
12  ---------------------------
13  ---------------------------
14  ---------------------------
15  ---------------------------
16  ---------------------------
17  ---------------------------
18  ---------------------------
19  ---------------------------
20  ---------------------------
21  ---------------------------
22  ---------------------------
23  ---------------------------

Complementary Intergenic Regions

IGR  +  1257608  1257962  ()  51  yjcI yjcJ