BLISSBreaker Lab Intergenic Sequence ServerHome

Intergenic view options: Interleaved

NC_000964.1 Bacillus subtilis (- 4034397 to 4034778) circular

Islands  CGA..CA.AACC..GA..GG,,,,,,.GCC...CAAGG.....AA..ACAA.AA......A..GAAG..AA.AC.AAG..
5'-   CGATTCATAACCTTGATTGGAAAAAATGCCTTTCAAGGTTTTTAATTACAATAATTTTTTATTGAAGTTAATACTAAGTT
          |         |         |         |         |         |         |         | 
          4034770   4034760   4034750   4034740   4034730   4034720   4034710   40
          |         |         |         |         |         |         |         | 
3'-   GCTAAGTATTGGAACTAACCTTTTTTACGGAAAGTTCCAAAAATTAATGTTATTAAAAAATAACTTCAATTATGATTCAA
Islands  GC.AAG.A..GGAAC.AACC......ACGG,,,G..CC,,,,,..AA.G..A..,,,,,,.AAC..CAA..A.GA..CAA

  
Islands  C,,,.C...A.GA..AC....G..C.AG,,,CGA.AG.CAACACC,,,,,.G,,,GCG..GACA.C.CACGAA.C.AG.G
5'-   CAAATCTTTATGATTACTTTTGTTCTAGAAACGATAGTCAACACCAAAAATGAAAGCGTTGACATCTCACGAATCTAGTG
          |         |         |         |         |         |         |         | 
  34700   4034690   4034680   4034670   4034660   4034650   4034640   4034630   40
          |         |         |         |         |         |         |         | 
3'-   GTTTAGAAATACTAATGAAAACAAGATCTTTGCTATCAGTTGTGGTTTTTACTTTCGCAACTGTAGAGTGCTTAGATCAC
Islands  G...AG,,,.AC.AA.G,,,,CAAGA.C...GC.A.CAG..G.GG.....AC...CGCAAC.G.AGAG.GC..AGA.CAC

  
Islands  C.,,,G.A.ACC.AC,,,C,,,.,,,,CGACCCG.CAGGA..G..AC.GCG,,,GCAGGC,,,,CC.,,,.GG.GCAGG.
5'-   CTAAAGTATACCTACAAACAAATAAAACGACCCGTCAGGATTGTTACTGCGAAAGCAGGCAAAACCTAAATGGTGCAGGT
          |         |         |         |         |         |         |         | 
  34620   4034610   4034600   4034590   4034580   4034570   4034560   4034550   40
          |         |         |         |         |         |         |         | 
3'-   GATTTCATATGGATGTTTGTTTATTTTGCTGGGCAGTCCTAACAATGACGCTTTCGTCCGTTTTGGATTTACCACGTCCA
Islands  GA...CA.A.GGA.G...G...A....GC.GGGCAG.CC.AACAA.GACGC...CG.CCG....GGA...ACCACG.CCA

  
Islands  GCAGGAGGAGAC.C.CGCAA.C.G.G.CA...AGG.......A..C.C....AGGAGG.GA.GCAGCA...GA.AC,,,,
5'-   GCAGGAGGAGACTCTCGCAATCTGTGTCATTTAGGTTTTTTTATTCTCTTTTAGGAGGTGATGCAGCATTTGATACAAAA
          |         |         |         |         |         |         |         | 
  34540   4034530   4034520   4034510   4034500   4034490   4034480   4034470   40
          |         |         |         |         |         |         |         | 
3'-   CGTCCTCCTCTGAGAGCGTTAGACACAGTAAATCCAAAAAAATAAGAGAAAATCCTCCACTACGTCGTAAACTATGTTTT
Islands  CG.CC.CC.C.GAGAGCG..AGACACAG.,,,.CC,,,,,,,.AAGAG,,,,.CC.CCAC.ACG.CG.,,,C.A.G....

  
Islands  ,,,GC.GG.G,,,GGCGGCCACC...CA.CCAGCAG.CCCCCCA.,,,,,GGAGG.A.ACAC
5'-   AAAGCTGGTGAAAGGCGGCCACCTTTCATCCAGCAGTCCCCCCATAAAAAGGAGGTATACAC
          |         |         |         |         |         |   
  34460   4034450   4034440   4034430   4034420   4034410   4034400   
          |         |         |         |         |         |   
3'-   TTTCGACCACTTTCCGCCGGTGGAAAGTAGGTCGTCAGGGGGGTATTTTTCCTCCATATGTG
Islands  ...CGACCAC...CCGCCGG.GG,,,G.AGG.CG.CAGGGGGG.A.....CC.CCA.A.G.G
Term (99.98)%  ---CGACCACTTTCCGCCGGTGGAAAGTAGGTCG----------------------------

IGR  -   4034397  4034778  ()  14  bglP bglH

Blast Hits

ID Organism Class Accession Start End Operon
0 Bacillus subtilis B/C NC_000964.1 - 4034397 4034778 bglP bglH [COG1264|COG1263|COG2190 COG2723]
1 Streptococcus mutans UA159 B/C NC_004350.1 + 924028 924427 bglP [COG1264|COG1263|COG2190]
2 Shigella flexneri 2a str. 301 P-g NC_004337.1 + 3841036 3841321 bglG [COG3711]
3 Listeria innocua Clip11262 B/C NC_003212.1 - 2552225 2552492 lin2530 [COG3711]
4 Listeria monocytogenes strain EGD B/C NC_003210.1 + 620381 620804 lmo0583 [COG0653]
5 Campylobacter jejuni P-e NC_002163.1 - 1325135 1325301 Cj1387c [COG2964]
6 Bacillus halodurans B/C NC_002570.1 + 4063984 4064308 BH3927 [COG4989]
7 Clostridium acetobutylicum ATCC824 B/C NC_003030.1 + 487763 488037 licT [COG3711]
8 Clostridium acetobutylicum ATCC824 B/C NC_003030.1 + 862390 862626 CAC0743 [COG2723]
9 Listeria monocytogenes strain EGD B/C NC_003210.1 - 2505158 2505424 lmo2436 [COG3711]
10 Bacillus subtilis B/C NC_000964.1 - 4011360 4011654 bglS [COG2273]
11 Bacillus subtilis B/C NC_000964.1 - 3903828 3904128 sacP sacA [COG1264|COG1263 COG1621]
12 Bacillus subtilis B/C NC_000964.1 + 3534534 3535071 sacB [-]
13 Escherichia coli K12 P-g NC_000913.1 - 3904196 3904480 bglG [COG3711]

0  ________________________________________________________________________________
1  AGATTAGTTTCAGATTGAAGACAAACTTACTTGAGGTTTGTCTT------------------------------------
2  T-------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  GAATTCTCCTTTGTTAAATATAGATTAAGCAGAATGCATTTTATCACTACAATAATAATTTGTCAATAGTTTATTATCAT
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  TCCTCCACCTCCCATATCTCTGTACGTTACTAACCTACTAACGTTTCAAATATTTTGAAAAATCCTTCAGTTAGAGATCC
13  T-------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  AATAATAAAATT--------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  TTTTTAACCCATCACATATACCTGCCGTTCACTATTATTTAGTGAAATGAGATATTATGATATTTTCTGAATTGTGATTA
13  --------------------------------------------------------------------------------

  
0  ________________CGATTCATAA____CCT___TGATTGGAAAAAATGCCTTTCAAGGTTTTTAATTAC______AA
1  ----------------TTTTCTTTTG----CCT---AAATCATGAAAAATTTTGTCTTCTAAATGTAAGTTT------AC
2  ----------------TCACCAGACA----AAT---CCCAATAACTTAATTATTGGGATTTGTTATATATAA------CT
3  --------------------------------------------------------------AATTTATCAC------CT
4  ------------------ATTCATAAAACTCCTCTCTTTTTTCAGAAAATCCCAGT--ACGTAATTAAGTATTTGAGAAT
5  ----------------TTATTTTTAA----GAA---ATGTTTTAAAGTATAAAGAGTAGAATTTAATATTAT------AT
6  -------------------------------------------------------CGTTGTTCACTCCCGCT------GA
7  ----------------------------------------------------------ATAAATCCTCCTAT------AA
8  --------------------------------------------------------------------------------
9  ---------------------------------------------------------------AATTTATCA------CC
10  --------------------------------------------------------------------------------
11  ----------------------------------------TGTCTTTTCCTGCTTTCTTTCATGATTGAGCA------TA
12  AAAAGGCAACTTTATGCCCATGCAAC----AGA---AACTATAAAAAATACAGAGAATGAAAAGAAACAGAT------AG
13  ----------------TCACCAGACA----AAT---CCCAATAACTTAATTATTGGGATTTGTTATATATAA------CT

  
0  TAA_TTTTTTATTGAAGTTAATACTAAG__TTCAAATC__TTTATGATTACTTTTGTTCTA__G_A_AACGATAGTCAAC
1  ATT-AGGCTGAATTTTAAAAATGATGGT--CAACCTAA--ACTTACATTAGGTTGGATTTT--T-A-AATAATAGTCGAG
2  TTA-TAAATTCCTAAAATTACACAAAGT--TAATAACT--GCGAGCATGGTCATATTTTTA--T-C-AATAGCGCATTGC
3  CCA-GCCAAAAATAGCATGCAGAAAACT--TCCTGTCA--ATGAATAAGTTATGTTAAAGT--A-G-GGAAGATATAAAG
4  TAA-TTTTATATTGA--TTAATACTAAG--TTTACCCA--GTTTTCAC--CTAAAAAACAAATG-A-TGAGATAAT-AAC
5  TAA-TTTTTTATTGAAGGCAGTTTT-------------------------------------------------------
6  AAT-AACACCTGATCATGAAATACACGA--GTGTTATT--TTACCACAATCACGATATTGT--T-G-ATTTGTAGTTAAC
7  TAAATATTATATAATAATTAATATTCAGAATTATGTCC--TATATAATTATAACAATTAGT--A-A-AGCTTTTTTCAAA
8  --------------------GAAATAAA--AGCTGCTG--AGTTTAGCGGCTTTTATTGTA--A-ATAAAGTTATTTGAT
9  TCC-AGCCAAAAATAGCATGCAGAAAAC--TACATGTC--AATGAATAAGTTGTGGTAAAG--T-A-GGGAAGATATAAA
10  --------------------------------------------------------------------------------
11  GTA-TGGCACGATATTGTGAAGTATTTC--ACAATTAA--TTTTTACGAATTTTTGTCTAC--A-T-GTTATATCAAACT
12  ATT-TTTTAGTTCTTTAGGCCCGTAGTC--TGCAAATCCTTTTATGATT-------TTCTA--TCA-AACAAAAGAGGA-
13  TTA-TAAATTCCTAAAATTACACAAAGT--TAATAACT--GCGAGCATGGTCATATTTTTA--T-C-AATAGCGCATTGC

  
0  ACCAAAAATGAAAGCGTTGACATC_TCACGAAT___CTAGTG_CTAA_AGTATACCTACAAACAAATAAAA__CGACCC_
1  ACTTTTGATTACCCTTTTAATTTT-TTATAAAAAAGCGCTTG-CAAA-AGTTAA---ATAATCTGCTATAA--TATCTTT
2  TATTTTCTCTGCACGCAATTAAAT-TAATTTCC---GAACCT-GGAT-GTTCGTTATAAAAACCATTAATA--AAT----
3  TAATCCAAAATTGAATATCAAAAA-TACCCCTT---GTAATC-GGTT-TCTTTTTGTACTATAATGTTAGA--GAAAAG-
4  TCCAAAGGCTAAAGAG--GAC-TA-T-ACCAA----CTATTT-GTAA---TAATTCTGTAA-CAGTTGAAAAGCGAAC--
5  --------------------------------------------------------------------------------
6  AACAAAAATGAAAGCGCTTTATTT-GTAGGTTG---TAAACA-AATC-GCTAGAATGACTCGGACCAATTG--GATTGA-
7  AT-AAATATAATTTTCTTGT--TG-ACAAAAAT---TTA-TG-AAAA-TGTTATCATTAGTTCATAGTATT--GAATAC-
8  A--AACAAGGCAGTGATTGACATGATTAAAATT---CTA-TG-ATAA-CCTTATCATAGAATTAAATTTAA--TAAAAA-
9  GTAATCCAAAATTGAATATCAAAA-AACCACTT---GTAATC-GGTT-TCTTTTTATACTATAATGTTAGA--GAAAAG-
10  --------TGAGAGCGCTGACATT-TGTGTTTC---CTTGTG-TTCA-CTTTTTCTTACATTCACATATGA--AAAT---
11  ATTTAACTAAAAAAATAGTTGACG-AAAACGCT---ATCATG-ATTT-ATGATGAAAGCGTATTCTTAATC--TGAATA-
12  -----AAATAGACCAGTTGCAATC-C----AAA---CGAGAGTCTAATAGAATGAGGTCGAA-AAGTAAAT--CG-CGC-
13  TATTTTCTCTGCACGCAATTAAAT-TAATTTCC---GAACCT-GGAT-GTTCGTTATAAAAACCATTAATA--AAT----

  
0  GTCAGGATTGTTACTGC__GAAA______GCAGGCAAAACCT_AAA__TGG_TGC__AGGTGC_AGGAGGAGACTC_TCG
1  GTAAGGATTGTTACTGG--TCAT------GCAGGCAAAACCT-AGA--TGA-ATA--CGAAAT-AGATTGCAAACG-AGT
2  GACTGGATTGTTACTGC--ATTC------GCAGGCAAAACCT-GA---------C--ATAACC-AG-AGAATACTG-GTG
3  AATAGGATTGTTACTGC--TGAG------GCAGGCAAAACCT-AGA--TTAATTC--AAGTGCTATTTTGATATTAATAG
4  GT--GTATTCTTAGGGCTTGAGATGTACTGCTGGGTAAACCT-TTA--TAG-TGT--AAGTG---GGATGTGAACG-TTA
5  --------------------------------------------------------------------------------
6  AAAAAATGAAGCGAAAA--GAAG------GAATCTCCTTGTT-TTC--TAG-CGA--ATATTA-ACAAACTCTGCA-AAC
7  AG--GGATTGTTACTGT--TAA-------GCAGGCAAAACCC-AGA--TTA------AAGTAA-ATGAAGTAATCA-TAT
8  -TAAGGATTGTTACTGG--TAAT------GCAGGCTATACCT-AAG-------GA--ATGTGT-AG-AGAATACTC-T--
9  CATAGGATTGTTACTGC--TAAG------GCGGGCAAAACCTGAAT--TAA-TTC--AAGTGCTATTTTGATATTAATAG
10  GGTAGGATTGTTACTGA--TAAA------GCAGGCAAAACCT-AAA--T---TGC--AA-TGA-GTGCGGATCATC-TCT
11  AGCGGGATTGTGACTGG--TAAA------GCAGGCAAGACCT-AAAATTTG-CGT--AAATGA-AAAAGGA------TCG
12  G---GGTTTGTTACTGA--TAAA------GCAGGCAAGACCT-AAA--ATG-TGTAAAGGGCA-AAGTGTATACTT-TGG
13  GACTGGATTGTTACTGC--ATTC------GCAGGCAAAACCT-GAC--ATA-ACC--AGAGAA-TACTGGTGAAGT-CGG

  
0  CA__ATCTGT_____GTCA___TTTAGGT__TTT__T_TTAT___TCTCTTTTAGGAGGTGATGCAGCATTTGATACAAA
1  GT--TTTGTT-----GTAT---TTATTTG--GTA--T-TTGT---TTAGGTTTTTTCTATTTTAATGCCTCATAGGATAA
2  AA--GTCGGT-----TTTT---TTTTGTT--TAT--A-AAAA---AGGTCCTTGCT------------------------
3  CG--TTGGAA-----TTAG---TTTGGGT--TTT--T-TTCT---T---TTGAAAGAGGTGAAAATGC------------
4  AT--CAACAA-----CTTT---CGCTATG--GGA--A-ACCT---ATTGTTTTTTGTTAATAGAAAAACTTAATACATTT
5  --------------------------------------------------------------------------------
6  AA--ACACTC-----ACCA---CTTTTCG--CCG--G-GTCT---CCGTTTTGAAAGCGCTTCGCTTAACGGAATGTCAT
7  CG--TTTATT-----TTAA---TTTGGGT--TTTTAT-TTATTGGTGTCTTTTTAATAATGGAGTGATATCAT-------
8  -A--ATACAT-----TTC-----TTAGGTA-TTT--T-TTAT---AAAATCAGATATATAAAATTTAGGAGGAATAACT-
9  CA--TTGGAA-----TTAG---TTTGGGT--TTT--T-TTCT---T---TTGAAAGAGGTGAAAATGC------------
10  GT--CTGTGCTGATGGTAA---TTTAGGT--TTT--TATTTT---TTTCAGAGGGAAGATGATGATAGTTACAGGATTCA
11  C------TGT-----GTCC---TTTA-----TTC--G-TTGG---CGAATTTTAGGTCTTT--------TTTGTTTAAAT
12  CGTCACCCCT-----TACATATTTTAGGTCTTTT--T-TTAT---TGTGCGTAACTAACTTGCCATCTTCAAACAGGAGG
13  GT--TTTTTT-----GTTT---ATAAAAA--AGG--T-CCTT---GCT--------------------------------

  
0  AAAAGCTGGTGAAAGGCGGCCACCTTTCATCCAGCAGTCCCCCCATAAAAAGGAGGTATACAC_________________
1  GATTGTAGAAGATCAGAAAAAAGAAAGGAGCCTAAA--------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  GTAATATAAAAACCGGCAGTTTTTCCGTTCTTCGTGACTCGAAATGAATTGCCAGATGAGTTTATGGTATTCTATAATAG
5  --------------------------------------------------------------------------------
6  CTACAATCAGAAATTTGAAGGAGGCTTTTGATTCAATC------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  AGTTAGTAAGATTCGATATTATCATTATTTTGACCGATGTTCCCTTTTAAAAGAATCATGTAAGATCAACATAGAAAACG
11  AAAAGGGGGAGAAATAG---------------------------------------------------------------
12  GCTGGAAGAAGCAGACCGCTAACACAGTACATAAAAAAGGAGACATGAACG-----------------------------
13  --------------------------------------------------------------------------------

  
0  _________________________
1  -------------------------
2  -------------------------
3  -------------------------
4  AAGGTATGGAGGATGTTATATA---
5  -------------------------
6  -------------------------
7  -------------------------
8  -------------------------
9  -------------------------
10  CTTTCAATGAAAGGGGAATGCCAAT
11  -------------------------
12  -------------------------
13  -------------------------