BLISSBreaker Lab Intergenic Sequence ServerHome

Intergenic view options: Interleaved

NC_000964.1 Bacillus subtilis (- 3664444 to 3664688) circular

Islands  ..,,,,GGCACC..CC..A.GA.CG,,,,,,...A.GG..,,,C.A..C.C.A...ACCC....CAA.A.G.....ACAC
5'-   TTAAAAGGCACCTTCCTTATGATCGAAAAAATTTATGGTTAAACTATTCTCTATTTACCCTTTTCAATATGTTTTTACAC
          |         |         |         |         |         |         |         | 
          3664680   3664670   3664660   3664650   3664640   3664630   3664620   36
          |         |         |         |         |         |         |         | 
3'-   AATTTTCCGTGGAAGGAATACTAGCTTTTTTAAATACCAATTTGATAAGAGATAAATGGGAAAAGTTATACAAAAATGTG
Islands  AA....CCG.GGAAGGAA.AC.AGC......,,,.ACCAA...GA.AAGAGA.,,,.GGG,,,,G..A.AC,,,,,.G.G

  
Islands  A.....A.GA.A.CGGA.,,,CCA.....,,,CAAGC...A.CC..AA.A..,,,,C..A.A.CA....A...GAA.CAA
5'-   ATTTTTATGATATCGGATAAACCATTTTTAAACAAGCTTTATCCTTAATATTAAAACTTATATCATTTTATTTGAATCAA
          |         |         |         |         |         |         |         | 
  64610   3664600   3664590   3664580   3664570   3664560   3664550   3664540   36
          |         |         |         |         |         |         |         | 
3'-   TAAAAATACTATAGCCTATTTGGTAAAAATTTGTTCGAAATAGGAATTATAATTTTGAATATAGTAAAATAAACTTAGTT
Islands  .,,,,,.AC.A.AGCC.A...GG.,,,,,...G..CG,,,.AGGAA..A.AA....GAA.A.AG.,,,,.,,,C..AG..

  
Islands  GAA.G,,,.GA...,,,,.GA.GCA....CA.G.AGAA.A.G.AG.A.GAA...A...AC.A.AGCAG,,,,CCAGG.GA
5'-   GAATGAAATGATTTAAAATGATGCATTTTCATGTAGAATATGTAGTATGAATTTATTTACTATAGCAGAAAACCAGGTGA
          |         |         |         |         |         |         |         | 
  64530   3664520   3664510   3664500   3664490   3664480   3664470   3664460   36
          |         |         |         |         |         |         |         | 
3'-   CTTACTTTACTAAATTTTACTACGTAAAAGTACATCTTATACATCATACTTAAATAAATGATATCGTCTTTTGGTCCACT
Islands  C..AC...AC.,,,....AC.ACG.,,,,G.ACA.C..A.ACA.CA.AC..,,,.,,,.GA.A.CG.C....GG.CCAC.

  
Islands  C,,,.
5'-   CAAAT
       
  64450   
       
3'-   GTTTA
Islands  G...A

IGR  -   3664444  3664688  ()  15  yvyH

Blast Hits

ID Organism Class Accession Start End Operon
0 Bacillus subtilis B/C NC_000964.1 - 3664444 3664688 yvyH [COG0381]
1 Staphylococcus epidermidis ATCC 12228 B/C NC_004461.1 + 797342 797517 SE0805 [COG0483]
2 Shigella flexneri 2a str. 301 P-g NC_004337.1 - 3709454 3709579 yiaB [-]
3 Oceanobacillus iheyensis B/C NC_004193.1 + 227944 228109 OB0208 [-]
4 Methanosarcina acetivorans str. C2A A NC_003552.1 + 5204099 5208167 MA4284 [COG1520|COG3291]
5 Clostridium perfringens B/C NC_003366.1 + 133621 133723 acdS [COG1960]
6 Clostridium tetani E88 B/C NC_004557.1 + 1316330 1317055 CTC01229 degV [COG1302 COG1461]
7 Mycoplasma pulmonis B/C NC_002771.1 + 281137 281253 MYPU_2430 [COG0018]
8 Clostridium acetobutylicum plasmid pSOL1 B/C NC_001988.2 - 22092 22282 CAP0021 [-]
9 Staphylococcus aureus subsp. aureus N315 B/C NC_002745.1 - 829340 830041 SA0724 [COG1090]
10 Bacillus halodurans B/C NC_002570.1 + 1373436 1373569 BH1279 [COG0775]
11 Bacillus subtilis B/C NC_000964.1 - 1399563 1399653 ykoN [COG0707]
12 Escherichia coli K12 P-g NC_000913.1 - 3725390 3725545 yiaB [-]
13 Chlamydia trachomatis P/C/V NC_000117.1 + 9120 9372 yfgA [COG1426]
14 Pasteurella multocida P-g NC_002663.1 - 2025605 2025668 mobA [COG0746]

0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  AGGAATTTAGCTCCATCTTTAGTTCAATTTCATGAAAATGTTGAGAAGAAATTTAATGGAAGACAAGTTTTTCAAGCACC
5  --------------------------------------------------------------------------------
6  CAAACACCCTTTTTAAAATTGCACATATAATATAATAAAATCAATTTAAAGAGGGGCTTGATTTGTGGAAGAGTAGGCGT
7  --------------------------------------------------------------------------------
8  TAAGGGGGAAGCAGC-----------------------------------------------------------------
9  ACTCTCCCTCACTTCAAACTAATTTAAATATAGAAATTATCACGCAACCATTAACATTTTCACAACTAATTTGCTTACCT
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  GATCACCTAAGAAAAAAGATTCTAATTTTAAGAAAAGGAAGAGCTGTTACCGTAGATTCTTCTTCATATTC---------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  GAACATGAAAAATTTCAATATAAGTTAATCGTTTACTGGAAAGCGGTATAAATATTTATTGAAATTTAGAGACCATTAAA
5  --------------------------------------------------------------------------------
6  GGCAGAAAAAAATTAGGTATGATAGTTGGTTCAATTGGAATTGGTATAATAGCCACCTTTATCCTTCCTATTTGGGGATG
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  AGTTTCTACAAATATTAATAAACATTTACTCTTTTTGCCTTCTTCAACTTAAAACTGCCTTCACTATTACTCACTCGTAA
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  AAGTATAATCAATTTTTTAGAAACTACGCAAATATGACCTTAAAATCTCCACGAAAACGAATTTAGAAAATTAGTTCCAG
5  --------------------------------------------------------------------------------
6  GATTTTAGCGGTTGGTGGAGGGCTTATATATGCAGGTTGGTATCTGATTCAGCAAAATAAATAAGAGGTGAATAGATGAA
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  ATCGGATTCATTTTTACAAAGAAATAGTAGTCTTATATATCTTAACATTTAATAACTAAATCAAACATATTTTGAGCCTT
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  GGAAGAACAGGAAGAACGTAAGCAACTGAATAGAAAATCTTATATAAAAATCGATAAATAATAGAATGATAATCAATTAT
5  --------------------------------------------------------------------------------
6  AATAGTTGCCATTAAATTGCCGAAATGTATTTCTAGGATTATAAAGTCAATATTCAAAAAAAGTGTAAACAAAAAATGCA
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  TTTTTGAAAATTAACATTTTAACCTTTTTGATTTTACAACAAATTATAGCTACGTATTGAAAATTAAAGCATTGGTTTAA
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  ATGGGGTTTAACTGCATCGATTGGGAAAAGTGCGGTTCCGGGAGATAGAAGTTGCTGAAAACCGCAGGTTTTCAAAGTCT
5  --------------------------------------------------------------------------------
6  ATTGACGACAATTGCATTTTTTGATTTATATTGCACGTTGAACCTTACCGGAACGTAAGCATCTTGTACATGCGTGTATA
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  GTGTTGTGTTAAAAGTTTTTATGTTTAGATTGTTATATTACTATGTATTCTTAAATTTGTTTAAAAAATTAATGCTTTAA
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  GTAAAAAATAGCTTCGCAGTTATGAAATGAAAAAATCTTCATTTACACCATTGTACACTGGTATAACTCTTCTCCCTTCC
5  --------------------------------------------------------------------------------
6  GTTTTAGGTGTTCCCTTAACTATAGCTTTAACTTTTTTAAGGTTTGG---------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  ATTGATGTATAATGGGAATAAGAAATAAATAAAAACG-------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  TGTCACAATTCCCGAGTTGCAAACTTTAGCCCGTAATCGAGATCAGAGTAAAAGTTAACACTTTGATATTGGAGGAGGAA
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  AATTATGCAAATGAAAGGGTCCGGGACACGAAAAGATCCCGTATGCGATATGGAGGTTATGGAAAGGGATGTAGAATACA
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  AAAGCGATTACAGAGGCAGAACTTATTATTTCTGCTCGTATGACTGCATGAAAAGGTTTCAGGATGATCCCGAAAAGTAT
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  CTAAGCTTCCATAGTCAGGAAGTACAACAGAAATGAGAATAGTGGCTTCCATTGATCACCGATTAAGTATTTCATTCCTT
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  CCCATCTTACTCTTTTTGGATCCAATTACTTTAATTCTTATTCAAACAATTCATCTCTAATCTTTCTCTTTTTGCATGTG
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  GGTCCAATGCTTGACTTTTATATTCACTTTACACAGTTTCAAAAAATTTTTGAGTTCCACATCTCTGAATTACTGTCAAT
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  ATTCCTCAATTCTTGCAAACATTTGAGTTTTGTAGAATCCAGGATCAACAAGAAGAACACCATCTTTGATCCATGAACCT
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  ATTTTTAATGTTTTGATTTCAGTTTTGAATGAAAACATCTTGGAAGTTTTCGAAGTTCTTTCTAAGTTTTCTACAAGGCT
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  CTTTTGCAAGCTCTTAAAGCGTGTCTTAAAATTCAATTTGATTATACAATTGGGATAGGACTCATGTATTTGGATTGAAA
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  AACGGTATAATTGAACCGTTAAATGTCTAAAGTTTAAATATTAACCATGATGTCTAATGCATTTGATATTATGTATCGAG
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  CGAATAAGTCAGATCTAATTAATTTACGGAGTAAACTTAAGATCAACAATGCTTACTACCCAAATGTAGAAATGATTTGA
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  ATTTTAAGACAGCCTCTTAGATGTCATGAATTACACATTGAGGAAGAAACTCAACAAGTTAGGGAGTGGATCAATAATAC
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  CAGATGCTATAACTTATGTTTTTACTGGATAGAGTTTCATATTTTCTTTTCAAACTGGTAAGTGTACGATGCAAACGTAC
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  ACCGAAACTGAGAGTTAAAATCCAAAAGAGTATGATAGGATCAAGTTTACGTTCATGTATTATAAGGCCGGTTTCTTTAG
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  CGCAGTTTGCCTTAACCACTCTCCGGAAATGTTTCTTGAAGAGTGACCTTTAAGAGTAGCTTAGGAACAAGGAGACATAA
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  GGTAAAGGGATCCAGATCTCATTATAAAAAACTATTATAAAAACAAGTACATGAGAGAGTATTCATTGCTTAACCGCTGA
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ____________TTAAAAGGCACCTTCCTTATGATCGAAAAAA____TTTATGGT_TAAAC__TAT______TC____TC
1  ------------------------------------------------------------------------------AA
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  TGCATGAATGAGATTTAGAAAAATTATCATAGGATAGAAAAAG----TTAAAC----AGAA--TAT------TCAGGGTG
5  --------------------------------------------------------------------------------
6  ------------AGCCCAAGTTCTCTTAGATTGACGGTGAGAG----TGACTATA-TTGAA--CTC------CA----GA
7  --------------------------------------------------------------------------------
8  ------------CAGCCAGAGAACTAAAGAATAACCTTTTAAA----TTTATGGT-TAAAC--TATAGCAAATA----TT
9  ------------ACCCGCACGATTAACGTACGGGTCCACTACT----AAAGGGAG-TCAAA--TTT------TT----AC
10  --------------------------------------------------------------------------------
11  ---------------CTTTTCACCTTCCTTATGATCAAAAACACCCTTATATTTTGTGAACGTTCT------CC----TC
12  --------------------------------------------------------------------------------
13  ------------TATCATCCTGAAATCTTTATGATCGAAAAAA----TTTTCTGC-GAAGA--ATA------AA----AC
14  ------------------AAAGTTTTCCTTATGATTGAAAAAA----TTT--GCA-AGAAT--CAT------AC----TG

  
0  TATTTACCCTTTTCAAT___ATGTTTTTACAC_AT__T__TTTAT_GATAT_CGGATAAAC____CATTTTTAAAC___A
1  TATGCCTCCTTTT-AAT---ATGATTATGGAT-AT--T--GT-AG-CATAAACTTTTAAAG----TTTATCTAAAATA-A
2  --------------------------------------------------------------------------------
3  ------------------------------TA-TT--T--TATAC-CACCT-ATACTTTCT----GATTTGGAAAT---A
4  TTAATACTGATATCAAC---GT-TCTTTATTC-AT--T--GGGAA-AAGAT--GCAGGAAA----AATTTTGAAAC---A
5  --------------------------------------------------------------------------------
6  TGTAACGCCTTTACCAC---AAACTT---CAC-AT--T--TTCTT-GACAT-TTTGAAAACACCTCCTTTATAAATTGGA
7  ---------TGTTCATT---AA--TTTTACACTAT--T--TTTAT-GATAT-TG---ATGC----CAGCGTTCAAA---A
8  TAATAACTACCTACAAAGAATTGTATTAACA--AT--TGGTTTAGAGGTTT-TGGCTCGAA----CATCTTAATTC----
9  CTTCGTTTGTATCATGC---AGCGTTTTACAC-ATACT--TTTAA-GAGAT--GTTTATTC----G----TTATCG---A
10  --------------------------------------------------------------------------------
11  AAAATATAGTTGCCA-T---ATTTTTTTAGGA-GG--A--CTGTC-----------------------------------
12  --------------------------------------------------------------------------------
13  CTTAAGTGTAACGCTTG---AGAAAAAGTCTA-GG--A--AACTT-TGATA-CTAAAAAAG----AGGAAATCTAA---G
14  TAATTAGAGAAAGAAGA---AAAC--------------------------------------------------------

  
0  AGCT__TTATCCT_TAATATTAA_AACTTAT_ATCATT__TTAT____TTG_AATC_AAGA_ATGAAATGATTTAA____
1  GGATGGTTATTCTCTTGTTTTAC-GAAGTCT-----TT--TTAA----AGGTAAAA-TAGT-GTGAATTCATATAA----
2  ------------------------ACGTTAT-CCCCTG--CCTG----ACC-GGGT-GGGG-GATAATTCACATCT----
3  AT-T--ATATCAT-AACACATAA-AAAACAG-CTAATT--TGTT----TCT-TATT-TAGA-A-------ATTTAG----
4  AGCTA-TTAGCTT-TAAGATTCA-AACTTGTTATCATT--TTTG----TTA-GATT-TATA-TTTTCTTACTCCGA----
5  --------------AAATAGTAAGATCTTAG-ATTATTAATGAA----ATT-AATC-TAGA-ATTAAATGATTTAA----
6  AAAC--AAAGCTT-CCCAATTAA-AACCTAT-ATCATT--TTATCATATTA-CATATAATATATGCAAGTGTATAAATAG
7  T-----------T-TAATATAAA----TTCA-ATAAAT--TTAT----CCA-AA---AAGC-TTGTA--GATATAA----
8  --CTA-TAATACT-T--TTTTAT-AGGTGTA-ATTATT--ATAT----TTT-TAGG-AGGT-TTTTTAA-----------
9  AGGT--ACA-CCT-T--TATTAT-AACTTAT-ATCATT--TTTA----TTA-AAAT-ACAA-TTCAAAAAAAGTTA----
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  ------------------------ACGTTAT-CCCCTG--CCTG----ACC-GGGT-GGGG-GATAATTCACATCT----
13  AGGC--CTATTTA-TTTCAGTAA-CGACAGC-CTCCTT--TCCT----TTT-TATG-GGTA-GAGCAAACCAGGGG----
14  --------------------------------------------------------------------------------

  
0  A__ATGATG_CA__TTTTCA_TGTAGAATATGTAGTATGAATTTAT__TTACTATAGCAGAAAACCAGGTGACAAAT___
1  A--TTTACA-TAGCTCTTCA-TGTATAATATGTAGTAATAGGAGAT--GATACG--------------------------
2  A--TATATC-TC--ACTAAT-TAATTAATATTTAGTATGAATTTAT--TCTGAAAATCATTTGTTAATGGCATTTTTCAG
3  T---TGTTGACA--TTTTTAATATAGAA-ATGTACTATGAATTTATAATTTCTAAAACAGAAATAACGAAGGGAGGATAA
4  T--AACTAT-TG--ACAGTT-TGAAGTTAAGGTATTGGATTTTGGA--AGTTAAAGTGTCAGATAACTTAACTCTTTGCG
5  A--GAGTTG-TA--ACTCTA-GATATAATTACAGAATTTTGGGAGG--AATTAAGGT-----------------------
6  A--ATAAAA-AA--TAAT-A-TTTGGCATATTTTCT-TGAATAAAA--TTAATATTTAATATAAAATAGCTTTAAGGCTT
7  ACTATAATG-TA--TCATTA-GCCT-------------------------------------------------------
8  --------------------------------------------------------------------------------
9  T---TGACA-TA--TTATTG-TCTAAATAATGTATAACCTTTGAAC--AACAATAATGATTATTAAATAGTAACTAAATA
10  --------G-AC--ATTCAT-CCTCCTTGAACGATTCTAACGTTTC--TTACTATAGCAGAAAACCGATACACGAGAAAG
11  --------------------------------------------------------------------------------
12  A--TATATC-TC--AGTAAT-TAATTAATATTTAGTATGAATTTAT--TCTGAAAATCATTTGTTAATGGCATTTTTCAG
13  A--ATTAC------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  TTTTGTCTTTCG--------------------------------------------------------------------
3  AC------------------------------------------------------------------------------
4  ACCAACAAAAAAAGTGGGAATAAGAGTTAAAACAGCATATTATTAGAAGTATTTCTTCCTGAGCACCCCCTGAAAAAATT
5  --------------------------------------------------------------------------------
6  ATGTTTAAGGAGGTTTAAT-------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  CAAAATTACATGGGGTGAATGATA--------------------------------------------------------
10  AAACTCGTGCGTTTCTCGTAGAGGGTGTGTATACTTATCAATGGATGTTTAGAAAAGAGGTGTAGAGG------------
11  --------------------------------------------------------------------------------
12  TTTTGTCTTTCGTTGGTTACTCGTAATGTATCGCTGGTAGAT--------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  AATTTAGAAATCAATTGATTAAACATCAGCTAAAAAATATAGGGGACAAATAACACGTCTATAGCTTATGTGGGAGACCC
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  TAAAAAATCGGTATCTAATTCATAAGCCAAAAATTCACCGAAAAAAAATTCCATGAATTTTCTTTTCAGTATCGAAAAAT
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  CGTAAAAACTTCATTCAGGCAAAGTAAGAGTTCCTTTGCTGAGGTCCAAAATCCTCCTTAACTTCAACTTTTTTCCAGAA
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  TAACGGTTAGCCTGGCGCTTCAAGGAGGTCCGAATTCCCTTCCCGGACACACTCTATATCTGGACGTGCCCGAGATTCCA
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  CACAGGCTAACCAAACCCCCTATGAAAACATAGGATACTTATATTATGGAGCAATTCTATATAATATTTTTGCTAATGTT
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  TTAACATATCAAAAATCAGTTAGATAATAAACAATTTTGATATTAAATAGACATATAATTGCTAATCCTCGAGCACTGAA
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  AAAACAGGAGCAAAGTAAATAATTTAAAGAAAAAGGTTAGCGTGTTAATTTTGTTCATGAAAATAATAAATATTAAAAAG
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  TTAGTAGGTAGAAATTTACATATAATCAGGACAAAAAACATACAGTACATAATAACTTTACTTCCAATTCACAGCAAAGA
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  TGAGACTTTGCCGAAAAAGGACTCAAAAAACTTACCCATTAGTATTAATCAGGTTTGTCATTGATATTATTTTCCAAGGA
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  TGGATAGTAACCTGCTTTCGGAAGGTAACTTGTTTTTCTCGTAATATTTTTACTGATAGCGTCTTTGCTAGAAAATACAT
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  TATTCCTGATACTAGACATTATTGCAAAAACGGCTCATTGTTTATATATGTCGTGAGATTTGGGCCATATGTTAACCAGT
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  TTCGAACCCGATATATATGTACATAATGTTTGAAAAACACCATCATTAAAAATACTTAAAATCTAATGTCGACCTGCCGA
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  ATATAGGATAGTAACAATTTTTGATTGATTTTTCATTTAATTCAGGATAACTCAATCCAAAAATAAGCCTAATGTTCCAA
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  AGTGGTTGAAAAGGAAAAATACAAGATAGAATTAAAAAACTTATCGATTTTTTTCATAATAAGGTGGGGGTTTTGTTACC
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  CTGCAGGGTAAGAATGATAAGCCAAAGATTTTTATTTGTAGAGGTGTTTAAAAGTTAGTTGGTCTAACCAAATTTTCCAG
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  AGAAATCCTGGAACTTTTTAGAAGAAAAATTACTAGGTTTAAGCTAAAAAATCGCTTAATTTGTAATTCAAAATTGTGTG
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  TAAAAATACTAGGAAGAGGATAAATGCTATAGTTATAAGGTAAAACCTTAGGAACTGCAAAAATTTTAATTTAGTTTGTC
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  AAATTAATTCGTTTGATCCGGCGCTTCAAAAAGGTCCAAAATATGATCTGCCCACTTAGTAGAACTCAAAATAAGGTCAG
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  ATTCCGCCCAGATCAACCTTCAGCCCTATGAAAACACAGGAGGTTATAAAAAATATTAGACACTGACAGTAGGTACTGAC
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  AGCACTTGTTTTTCTTTACACGGTTCGATGCCTGAATTTGTTCCTTAAAACTGGAAACTCAGGTATGCCCTTCAGCGAAA
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  ATTTAGACGAGTATAGAGGTATCTTTACTTAAGGGCTCATTTTTAATTTTCAATTCGAACCGTGTTTTTCATTCAGCATT
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  TTTCCGGATTTTTGGATGCTGTTATCATCTATTCGATCACCGGAAACTTCCAGAGCAAATACTTCAAAACCGGTTGATCC
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  TAGACAAAAATCCGTGAGAATAAAAAACAGAAAAACTAAATCCAGTCGCTTCCTGCCTTCTTAAGGTCCGAAAAATTCTT
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  GAGACAACAATCCAGTCCGATCAAAACCCCTCCTGAAAATTCAGATTTCAGATGACCGGGCATTTCCGCGCAGGCAGGCT
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________
1  ------------------------------------------------
2  ------------------------------------------------
3  ------------------------------------------------
4  TAACCCCTATGAAAAAAGAGGAGAAACGAAAATATGAACAAACATACA
5  ------------------------------------------------
6  ------------------------------------------------
7  ------------------------------------------------
8  ------------------------------------------------
9  ------------------------------------------------
10  ------------------------------------------------
11  ------------------------------------------------
12  ------------------------------------------------
13  ------------------------------------------------
14  ------------------------------------------------

Complementary Intergenic Regions

IGR  +  3664444  3664688  ()  11  gtaB