BLISSBreaker Lab Intergenic Sequence ServerHome

Intergenic view options: Interleaved

NC_000964.1 Bacillus subtilis (+ 363772 to 363826) circular

Islands  ACCGA.C,,,,.,,,.AG.AA..A..ACGA...G..AG.GAGAGGAG....C.GA
5'-   ACCGATCAAAATAAATAGTAATTATTACGATTTGTTAGTGAGAGGAGTTTTCTGA
          |         |         |         |         |      
          363780    363790    363800    363810    363820    
          |         |         |         |         |      
3'-   TGGCTAGTTTTATTTATCATTAATAATGCTAAACAATCACTCTCCTCAAAAGACT
Islands  .GGC.AG....A...A.CA..AA.AA.GC.,,,CAA.CAC.C.CC.C,,,,GAC.

IGR  +  363772  363826  ()  11  yciA yciB

Blast Hits

ID Organism Class Accession Start End Operon
0 Bacillus subtilis B/C NC_000964.1 + 363772 363826 yciA yciB [COG1469 COG1376]
1 Lactobacillus plantarum WCFS1 B/C NC_004567.1 + 415103 415369 lp_0463 lp_0464 [COG1121 COG1108]
2 Lactobacillus plantarum WCFS1 B/C NC_004567.1 + 806014 806123 lp_0868 [COG0735]
3 Staphylococcus aureus subsp. aureus N315 B/C NC_002745.1 - 2660196 2660527 SA2370 SA2369 [COG0492 COG0370]
4 Staphylococcus epidermidis ATCC 12228 B/C NC_004461.1 - 2029909 2030098 SE1993 [COG0834]
5 Sulfolobus tokodaii A NC_003106.1 - 1235096 1235152 ST1233 ST1232 ST1231 [COG1350 COG0159 COG0547]
6 Staphylococcus epidermidis ATCC 12228 B/C NC_004461.1 + 1023472 1023637 SE1018 [COG0199]
7 Bacillus halodurans B/C NC_002570.1 + 395465 395899 BH0366 [COG0523]
8 Lactobacillus plantarum WCFS1 B/C NC_004567.1 - 880349 880553 lp_0946 [-]
9 Staphylococcus aureus subsp. aureus N315 B/C NC_002745.1 + 1333834 1334286 rpsN [COG0199]
10 Bacillus subtilis B/C NC_000964.1 - 3138307 3138525 ytiA [COG0254]

0  ________________________________________________________________________________
1  GCCCCCTTAAATTAAAGTAATGATAAACATGAATTGACCGTGTTTTACCGGCTTAACGGTAAAAACGGTCTTTTTTTTGC
2  CGCTGACGTATAGACGGTCAACGTAATTCACTTTTACACTTGA-------------------------------------
3  AGAAATACTTTATCTTTATTGGGGAGACGACGAAATAAGTTTTGTAAAAATATGATTTATGTCTCACCGCCAAAATGTTA
4  TATTATGAAAGAAAT-----------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  TTACTTATCTTTCAAATACGACAATTTGAAACGAAAACTCTCCTTAACTCATAGGGGAGTTTTTTTTTATAGTTTGTACT
7  ATAGAAGGTGATCAAATGAGGCCTTTATACGATACAATCGGCAAAAAATATGACACGACACGGAAAGCAGATCAGGAAAT
8  GG------------------------------------------------------------------------------
9  TTCTTATCATTCAAATACGACGATTTGAAAATAAAGCGGGCTTACCTATTATATTGGGGAGCTCGCTTTTTTATGAAATT
10  AACTAAATCATCCACAATCGTAAACCACCTTTCCAAAAAGACGTTCTGTATGTATTTTGGGTTTATTATTTGCTTCCTCG

  
0  ________________________________________________________________________________
1  AATCTCGTCTTAGTGACAAGCGCATTCAACTAGTGGTCAAGGTGTTATTTGATTAGGCCCTGATGATTGCCGCAGCTGGT
2  --------------------------------------------------------------------------------
3  TCTCCAAGTACTGAGGCTGGATGATACCATTAAATGTCATTCATAATCATTTGAACTAACCGTAGCATCCTTAAATTTAA
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  TAGAAGAATTTTCACTTGTATATTTTGAAATAT-----------------------------------------------
7  CGCAAGGCGTTTACGTCATCATTTGCACGTGCCTAATAGTAGTAAAGTCCTTAATATCGCTTGTGGAACAGGTAATTATA
8  --------------------------------------------------------------------------------
9  TTTGTGAAGAGTGATTAATGGATTGAGTTTCATCGGTAGAACAATATATGATTGTATTAGTTGTTACTTTATTAAAATTT
10  GTTAGATTATTCTTCCTATTCTTAAATGCCATGAGGTTTACGATGTGAAACAGAGGGAAGGATATAAGAAGATTGACAAA

  
0  ________________________________________________________________________________
1  AATGATTACGGCATTTTGAACTCAGGTATTGACAAATCACTGCA------------------------------------
2  --------------------------------------------------------------------------------
3  TAAAAAAGACACATACCAACTTCCGAAATGTAGATGAATTCTCTACAATAACGGAAGTTTTTCTTTTAATATTGAAATTT
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  CTGCAGTTCTAGAGGCAACCGGCTTACAGATGGCAGGATGTGACCTTTCAACGGAAATGATTACACAGGCGAAACTTAAA
8  --------------------------------------------------------------------------------
9  GAGAATATTTATAGAAGGAAATAGATTACTGATTTTATAAAGTCACTTTGTTAGCGAATGCTTGAAAGAGTATTTAATAT
10  ACGTTTGTA-----------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  CTTAAGGATAGG--------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  TCTAAATAGAAGTAACGGCGATGCGGTGGGCCAGTATCTTCTTGATGTTGGAAACATTCAATCTACACCAGAAAGAAGAA
8  --------------------------------------------------------------------------------
9  AGTAGAATTTAAAATTTCAAAGCGGAATTTAATAAGTACGAAGTAATTCTGGGTATGTTTTATAAATGTTCGATAATACA
10  --------------------------------------------------------------------------------

  
0  _____________________________________________________________________________ACC
1  -----------------------------------------------------------------------------TTC
2  -----------------------------------------------------------------------------GTA
3  -----------------------------------------------------------------------------TCT
4  -----------------------------------------------------------------------------TAA
5  --------------------------------------------------------------------------------
6  -----------------------------------------------------------------------------ATG
7  GGCTCGTCCATTGGGGGGCGTTTTTTTTAAGTATTTGTGTTTGACCTTCTTCGCCATTTCCCTT-------------AGT
8  -----------------------------------------------------------------------------GTG
9  CTTTAATCTTAAATATGATGGTTTAGAAAATGATTTAACAAAGAAATGAAACTTTACTGTTGAATTATGTGAGGATTGTG
10  -----------------------------------------------------------------------------AGG

  
0  GATCAAAATAAA_TAGTAATTATTACGATTTGTTAGTGAGAGGAGTTTTCTGA___________________________
1  AGGTAAACTAAAATAGTAATCATTACGATTTACTTTAATTTAGAAAGTTGGGGTAGTGTT--------------------
2  TGCTAAACTAAA-TAGTAATGATTATGATTT---AGTGAAGTCCTGGTCAGTAGGAGGCAGCAACATT------------
3  ATACTTTATAAA-TCGTAATTATTACGATTTAT-AGTCAAAAACAATAACTTGAAATAGATCATTGAGGGAGTGTTAAT-
4  GTTATTTGTAAA-TAGTAATTATTACGATTTGTAAATAGTTTAAAATAATAGTTAATAGAGTTTGAACTTTCTGAACACT
5  --------------------CATTAAGATTTATAAGTGAGATGAGTTTTTAGTCTATTAGGTGTTTTTGTTGCACCA---
6  TTATTCTATAAA-ACGTAATTATTACGATTTGT-AGAAAGAGGTTATAATAT----------------------------
7  ATAGATTATAAA-TAGGAATTATTACGATTTATACGAAAGGTACTGACT-------------------------------
8  CCTCCTGATAAA-TAGTAATTATTACCATTTAAATTATAATCAATCTTATGCTTACGTCAACTATTATGCAGCCAGCTGA
9  TTATTATATAAA-TCGTAATAATTACGATTTGATAAAAAGTGAGGTAACTATAT--------------------------
10  TTATAAAATAAA-ACGTAATTATTACGATTTATT---GAAAGGAGATACCC-----------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  TGTTAGCAAGTAACTCTTTATTGACTATTATGTAATAACGGGATAAAATATTTTTATTCCGATTAGAATAATAAGAATAA
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  CATTGACAGATACAATTAGCTCCCAATAATTAAATTATCATTTATTAGACTAACGGCAATGACAATGTTACCCTTAAATT
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------

  
0  _________________________________________
1  -----------------------------------------
2  -----------------------------------------
3  -----------------------------------------
4  GGGGTTTGATTAA----------------------------
5  -----------------------------------------
6  -----------------------------------------
7  -----------------------------------------
8  GTCAATGACATTATATAAGTATTTTGAAGGAGTGGGGATCT
9  -----------------------------------------
10  -----------------------------------------