BLISSBreaker Lab Intergenic Sequence ServerHome

Intergenic view options: Interleaved

NC_000964.1 Bacillus subtilis (- 3104125 to 3104550) circular

Islands  ..G.CC.CAA.C.CCGCCCG..CAGGG.ACA..CCCA..G.A.AC,,,CC.GC..GCAC..A.GAACAGAA..C.A.,,,
5'-   TTGTCCTCAATCTCCGCCCGTTCAGGGTACATTCCCATTGTATACAAACCTGCTTGCACTTATGAACAGAATTCTATAAA
  |         |         |         |         |         |         |         |         
  3104550   3104540   3104530   3104520   3104510   3104500   3104490   3104480   
  |         |         |         |         |         |         |         |         
3'-   AACAGGAGTTAGAGGCGGGCAAGTCCCATGTAAGGGTAACATATGTTTGGACGAACGTGAATACTTGTCTTAAGATATTT
Islands  AACAGGAG..AGAGGCGGGCAAG.CCCA.G.AAGGG.AACA.A.G...GGACGAACG.GAA.AC..G.C..AAGA.A...

  
Islands  ,.ACAG..AGA..ACGG..GCGA.AAGAACAA.GAAGAGGAGCAG.AAG,,,CAGA.A..G..GCAGAGAG..GACGGC.
5'-   ATACAGTTAGATTACGGTTGCGATAAGAACAATGAAGAGGAGCAGTAAGAAACAGATATTGTTGCAGAGAGTTGACGGCT
  |         |         |         |         |         |         |         |         
  3104470   3104460   3104450   3104440   3104430   3104420   3104410   3104400   
  |         |         |         |         |         |         |         |         
3'-   TATGTCAATCTAATGCCAACGCTATTCTTGTTACTTCTCCTCGTCATTCTTTGTCTATAACAACGTCTCTCAACTGCCGA
Islands  .A.G.CAA.C.AA.GCCAACGC.A..C..G..AC..C.CC.CG.CA..C...G.C.A.AACAACG.C.C.CAAC.GCCGA

  
Islands  GG.G,,,G.CAA.CAAG...G...CCGAAC.CACC.CAGAG..GCAGCGG.G,,,,GCCGC.GACGCA.AAC.GCG..,,
5'-   GGTGAAAGTCAATCAAGTTTGTTTCCGAACTCACCTCAGAGTTGCAGCGGTGAAAAGCCGCTGACGCATAACTGCGTTAA
  |         |         |         |         |         |         |         |         
  3104390   3104380   3104370   3104360   3104350   3104340   3104330   3104320   
  |         |         |         |         |         |         |         |         
3'-   CCACTTTCAGTTAGTTCAAACAAAGGCTTGAGTGGAGTCTCAACGTCGCCACTTTTCGGCGACTGCGTATTGACGCAATT
Islands  CCAC...CAG..AG..C,,,C,,,GGC..GAG.GGAG.C.CAACG.CGCCAC....CGGCGAC.GCG.A..GACGCAA..

  
Term (77.72)%  ---------------------------------------------------------------CTCTCGTCCCTTTTTGG
Islands  ,,G.A.CAAG.GAG.GCGGCG.A.GCCGCGC.AACGAGGG.GG.ACCGCGGG,,,,CG,,,G.C.C.CG.CCC.....GG
5'-   AAGTATCAAGTGAGTGCGGCGTATGCCGCGCTAACGAGGGTGGTACCGCGGGAAAACGAAAGTCTCTCGTCCCTTTTTGG
  |         |         |         |         |         |         |         |         
  3104310   3104300   3104290   3104280   3104270   3104260   3104250   3104240   
  |         |         |         |         |         |         |         |         
3'-   TTCATAGTTCACTCACGCCGCATACGGCGCGATTGCTCCCACCATGGCGCCCTTTTGCTTTCAGAGAGCAGGGAAAAACC
Islands  ..CA.AG..CAC.CACGCCGCA.ACGGCGCGA..GC.CCCACCA.GGCGCCC....GC...CAGAGAGCAGGG,,,,,CC

  
Term (77.72)%  GATGAGGG------------------------------------------------------------------------
Islands  GA.GAGGGAG........AG...GGGAA.A..C.GAA.A.AA.CC.C.CC..CCCG.CAA.AC..GAACCA.ACACGCCG
5'-   GATGAGGGAGTTTTTTTTAGTTTGGGAATATTCTGAATATAATCCTCTCCTTCCCGTCAATACTTGAACCATACACGCCG
  |         |         |         |         |         |         |         |         
  3104230   3104220   3104210   3104200   3104190   3104180   3104170   3104160   
  |         |         |         |         |         |         |         |         
3'-   CTACTCCCTCAAAAAAAATCAAACCCTTATAAGACTTATATTAGGAGAGGAAGGGCAGTTATGAACTTGGTATGTGCGGC
Islands  C.AC.CCC.C,,,,,,,,.C,,,CCC..A.AAGAC..A.A..AGGAGAGGAAGGGCAG..A.GAAC..GG.A.G.GCGGC

  
Islands  .A..CAA.CAGAAGGAGG.....AC.
5'-   TATTCAATCAGAAGGAGGTTTTTACT
  |         |         |     
  3104150   3104140   3104130   
  |         |         |     
3'-   ATAAGTTAGTCTTCCTCCAAAAATGA
Islands  A.AAG..AG.C..CC.CC,,,,,.GA

IGR  -   3104125  3104550  ()  15  leuS

Blast Hits

ID Organism Class Accession Start End Operon
0 Bacillus subtilis B/C NC_000964.1 - 3104125 3104550 leuS [COG0495]
1 Clostridium tetani E88 B/C NC_004557.1 + 827087 827493 CTC00781 [COG2502]
2 Pseudomonas syringae pv. tomato str. DC3000 P-g NC_004578.1 - 4027559 4027964 PSPTO3569 [-]
3 Oceanobacillus iheyensis B/C NC_004193.1 - 2359437 2359889 leuS [COG0495]
4 Bacillus halodurans B/C NC_002570.1 - 2672119 2672535 ileS [COG0060]
5 Bacillus halodurans B/C NC_002570.1 + 906954 907271 BH0834 [COG0018]
6 Listeria innocua Clip11262 B/C NC_003212.1 - 1684504 1685573 trpE trpG trpD trpC trpF trpB trpA [COG0147 COG0512 COG0547 COG0134 COG0135 COG0133 COG0159]
7 Listeria monocytogenes strain EGD B/C NC_003210.1 - 1711269 1711671 leuS [COG0495]
8 Listeria innocua Clip11262 B/C NC_003212.1 - 1767079 1767481 leuS [COG0495]
9 Thermoanaerobacter tengcongensis strain MB4T B/C NC_003869.1 - 1553634 1553963 IleS [COG0060]
10 Streptomyces coelicolor A3(2) Act NC_003888.1 + 2226684 2227236 SC4A10.09 [COG0060]
11 Bacillus subtilis B/C NC_000964.1 + 2471976 2472379 yqjO [COG0345]
12 Listeria monocytogenes strain EGD B/C NC_003210.1 - 1676326 1677408 trpE trpG trpD trpC trpF trpB trpA [COG0147 COG0512 COG0547 COG0134 COG0135 COG0133 COG0159]
13 Bacillus halodurans B/C NC_002570.1 - 3405924 3406442 leuS [COG0495]
14 Bacillus subtilis B/C NC_000964.1 + 20557 20877 serS [COG0172]

0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  GGCTTTTCATAAAGGGCGTACGGCCGTTGCCTGTATCG------------------------------------------
3  TTGCTTTTGTGATATTTACATTTTAGCATGTCTAATATTAATAAATAAATAGAAGTAAGTTTCCAA--------------
4  AAGGGAGCT-----------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  TTTCCAGAACCTCCTAATATTTGTGCGGGACTCTAAATGTCCATAGTAGACTTTTGACGTCCCTGATAATCCAAAAAAAT
7  TAGTTTTAGACTCCTTCAAATGAAATTC----------------------------------------------------
8  TAGTTTTAGACTCCTTCAAATGAAATTCT---------------------------------------------------
9  --------------------------------------------------------------------------------
10  GGCCGCGGCCCCTTCACATATTGTGATCTTGCGCGCGAATCGTGCTGGGACGATAAATCGACTCCGGTCCCGCGGCAACG
11  CCTTTCGCTCCTTGTCTTCATTCATTATTCATATTTTAGCTTTTTCTCGGTC----------------------------
12  TTTCCAGAACCTCCTAATATTTGTTCGGGACTCAAAACGTCCATAGTAGACTTTTGACGTCCCTGATAATCCAAAAAAAT
13  GGCAATGGTGGCAAAAATGGTGTCAAG-----------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  TTGACTTGTTGCTGTGCCATATTCTTTTGTTTTATTTGATTACACCGTTAGTATAAGCCATCAATAAAAGTTTGTCCAGT
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  GGGCACGCCGCCCGATTCGCCCGCCCACCGTGCGCCGCGCGGCGAGCATGCATGCGTTGTGCCCAGCTCCCCGCCCGGTA
11  --------------------------------------------------------------------------------
12  TTAGCTTGTTGCTTTGCCGTATTCTTTTGTTTTATTTGATTACACCGTTAGTATAATCCATCAATAAAAGTTTGTCCAGT
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  GTTTCACGTGAAAATATTCACAAATAGACGAAAATGAGCGGATAGTCCTTCTGGGAAAGCAATTTTTAGTCTATAAGGCA
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  ATCCGCCGGAACGCCCCCGGGCCGCACGTGCGGGGACCGACCCC------------------------------------
11  --------------------------------------------------------------------------------
12  GTTTCACGTGAAAAACTTCACAAATTGATAAAGATGGTTGAAAAGTCCTTTTGTAAAGTTGTATTATAGTTAATTAGGCA
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  TAGTTTGTATGAGTGGTTTTATCATATAGTTTTAAGGGGATTTTCATCTCTAGTTGACTCGTAAATAAAAGGTAATTAAG
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  TAGTTTATATGAGTGTTTTTATCATTGGGATTTAAGCGAATTATCATTTGAAAACATATATTTTATAGGGTTTTTAAGGA
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  _______________________________________________________________________________T
1  --------------------------------------------------------------------------------
2  -------------------------------------------------------------------------------G
3  -------------------------------------------------------------------------------T
4  -------------------------------------------------------------------------------T
5  --------------------------------------------------------------------------------
6  ATAATGATTTTTTTTTACTATTAATAATGTCCTGTATTAATAGGGGGATAGAGGGATTTTCTATGATAGT---------T
7  -------------------------------------------------------------------------------T
8  -------------------------------------------------------------------------------C
9  --------------------------------------------------------------------------------
10  -------------------------------------------------------------------------------C
11  -------------------------------------------------------------------------------T
12  AGTTAGTGTTCATTATAATAGAGAGAATAGCATGCTTTTTCTGAAGTGAAATATATTTTAGATGGGTAGTTCTTTTTTCT
13  -------------------------------------------------------------------------------A
14  --------------------------------------------------------------------------------

  
0  TGTCCTCAATCTCCGCCCGTTCAGGGTACATTCCCATTGTATACAAACCTGCTTGCACTTAT_GAACAGAATTCTA__TA
1  --ATCTATTGACATTGGGAAATATAAAATATATAATATTAATCAATAGTTTTAAATGGAAAT-TTTAAAAAAGACA--GT
2  CCGTGCGTCCCTCTTCTCCGAACTACCCGCGTAACCCCTGACCGTTCGTCAGTTTATATACG-GCGCAGGCCATCC--AT
3  TTGAGAAATATGTATATACTATGATTATATTTCGATGGTTTCTTGACATCGAAAAGTATTTT-CATTATAATTCCA--TT
4  TGTAAAAAGTAGCTTAGATCTACTTGCGTTCTTTTTAGCTCTCGCATATAATGAATTTTAAT-TAAAAAAGCGAAC--AT
5  --------------------------------------GGATGAGATCATACTAGACAGATG-GCGTGGGCTCTGT--TA
6  CTTTTTACTTAGTTGTTTATTAACTGCTATTTTGATTTATGTGGTTTTATTTTCTTGACTTT-CCGTTTGTTCTTA--TG
7  CCATTCATTTTAGCACATTTTGTTAGGAAAGTTAGATAAATCTTCAGAGCGCTTGC--TAAA-AAAATGAAATTCAGCTA
8  CATTCATTTTAGCACATTTTACTACGAAAGTTAGATAAATCTTCAGACC-GCTTGC--TAAA-AAACCTAAAT-----TC
9  --------------------------------------ATTTTAATTGTATTGACTTAATGG-AGGATGTGTTATA--TA
10  GGACGGCGGCATTCGGGTCACCCCGAAACCGGTCGGCCGTTGTCCGCGCGGCGCCGTACACT-GGGCGCAGCGAAC--GG
11  TGTGTCATTATTGCAGAATGAGAACAAACCTTTTTGAAAAAGCTATTGACATTAGCTTGTCC-GCCATTGCATAAT--GA
12  TACTTGTTTATTAATTATCGTTTTGAAACCTTTTTAGTATAAAGTAGTTTTATTTTCTTGAC-TTTCGTGATTTTC--TT
13  TCAACATCAAAACTTGACAGATAGTGAGTGTATTTTTACAATTACATTATTCATTGTCGTCT-TTTTAATGGAACG--GT
14  ------------------------------------AACAGTTGAAAGCTGTGGAAACTTATAGTACATTATAAGC--AC

  
0  AAATACAGTTAGATTACGG____TTGCGATAAGAACAATGAAGAGGAGCA_GTA_AGAA_ACAGATATTGTTG__C__A_
1  GATGGGAAGAGTAAGTGTA----AAAGGTAATTATAGCGAGTCGATGATG-GTG-AAAG-ATTGATATGAATT--T--T-
2  TCCTTGAAGTGCTGATTCG----CCTCCTGTGCCCATTTATTGGAAAACA-GTA-GGGT-GAATCGTTTTTGC--T--G-
3  AAAT-CAATTA----ACGA----CTATGATAAGGACTA-GTAGTGTGTAA-CTC-ATCA-AAAAA-------------A-
4  ACAATGGACGATGAGAGGG----ACAGTACACGTCACCCCTTCCAAAAGC-GAG-TCAG-GGATGGTGGAAGC--C--T-
5  AAATGC---TCGATAACTGAA--TCGCGTGAACGTTAAAGATTGGGAG-A-GTA-CTTTTACCGAAAGTCATA--A--AA
6  TAAGATGAATACAAGTAAA----AAATGATAGCTTTGATGAAGAGTA--A-GTA-GCAT-GATGAAAGTTTTT-----A-
7  CAATAAAACTA-ATGAATT----TTGCGA-AATAGCGATGAATTGGAGTA-GTA-ATCT-GCATATTTTGATGTGA--A-
8  AGCTACAATAAGACTAATGAATTTTGCGA-AATAGCGATGAATTGGAGTA-GTA-ATCT-GCATATTTTGATGTGA--A-
9  ATTTG-AGTAAAAATAATA----TCGGGAAAAG--CTATGAAGAGGACGA-GTA-GGTA-GAAGCGGCTTT----C--A-
10  CATGGATGGGGACGAGTAG----CGGCGTCAGCAGCCCAGAGCGACCCGG-GGA-CGGT-GTGAGCCCGGGGG--C--G-
11  ACAACAAACTAAAACGAGA----ACCATTGGAACGCTATGACGAGGAATA-GTATACAA-GGCAATGGCCTAA--G--A-
12  ATGTAAGATAAACACAAGT----AAAAAATGATAGCATTGAAGAAGAGTAAGTA-GCAT-GATGAAAGTTTTT-----A-
13  TTGGGACGAATGCATATCA----TGAATGAAAAAACAGTGACGAGGAGTA-GTA-GTGG-GCCCCTGCTTGCG--CCTA-
14  AAATAAAGATCGAAAAGCG----TTG--ATAGGAACTA-------------GTA-GGGA-GCCTCTCTTTCTA-----A-

  
0  GAGAGTTGACGGCTGGTGAAA___GTCAAT____CA_A_GTTTGTT_TCC____G__AAC_TCACCTCAGA_G_T____T
1  ATACTGAAGAACATCCCTGAG---TCTCTA----AC-C-GAAATCA-ATA----T--ATT-GAGAGTAGGC-T-T----A
2  TGTGTTTTTTAATAGCAGGAC---GGTTTA----AA-C-GTTCTGT-GCA----T--ATT-CAGTTATGAA-A-G----T
3  GAGAGACAGTGGTTGGTGAAAACTGTTGAT----GA-T-GTACATA-T------G--AAC-TCACCTTGGATG-T----T
4  GATGGAACGTGAATGTGGAAA---ATCACC----CT-T-TAGTTTT-TGC----A--CCG-AACGATCGTT-G-A----T
5  GCGAGTCG--GGATGGTGGGA---GCCGAT----TG-G-ACTGGTG-AAA----GGAAAC-GCACCCATGA-A-A----T
6  GAGAGCTGACGGTTGGTGAAA---GTCAGT----AG-C-GGACATGATGT----G--AAT-GGACTTCTGA-G-C----T
7  GAGAGCTGACGGTTGGTGCAA---GTCAGT----CACA-AAATCTG-GAT----G--AAC-TTACCATGGA-GCT----T
8  GAGAGCTGACGGTTGGTGCAA---GTCAGT----CACA-AAATCCG-GAT----G--AAC-TTACCATGGA-GCT----T
9  GAGAGTTGGCGGTTGGTGCGA---GCCAAT-----A-A-GTTCGTT-TCTACTGA--AAA-TCCCCTCGGA-G-C----T
10  AGCGCGACGTGAAGATCACCC---CGGAGC----CG-C-CGGAAGA-AAG----C--CGT-GGCAGGACAG-T-C----A
11  GAGCGATACCCCCGGCTGAAA---GGTGTTGCGGCC-C-GCTTGTT-TGTA---G--AACCTGCCCTCA-A-G-T----C
12  GAGAGCTGACGGTTGGTGAAA---GTCAGT----AG-C-GGACATG-ATG----T--GAA-TGGACTTCTG-A-G----C
13  GAGAATTGACGGTTGGTGGAA---GTCAAT----CGCA-GCAGCCA-T------G--AAC-TCGCCTTGAA-G-T----T
14  GAGAGCCGATGGTTGGTGCGA---ATCGGT----GA-AAGATGCTG-TCT----G--AAT-CCATCCTTGA-G-CGAAAT

  
0  GCAGCGGTGAA_______AAG___CCG_CTGA__C_______GC_AT_AACTGCG____TTA____A__AA____GT_AT
1  GACGAAACCAG-------ATC---GTT-AAAG--C-------TG-GG-AGTATTG----TTA----G--AT----AC-TT
2  TGCTGGCGATG-------TGC---TCA-AGGG--T-------GT-AT-AACTGCG----TTA----A--------GC-AT
3  GCTGTAGTGAACTT----AAGTAACTA-TTGC--C-------GT-TTCATCAACG----TTA----T--CG----AT-GT
4  TCAGTAGGCTG-------CAA---CAG-GTCA--T-------GC-CT-GTTAACA----ATG----A--CA----CG-AG
5  GGCCTGTTGAA-------TAA---AAG-TAGA--CAGGTCCGGT-TT-GTCACCG----TTA----T--GT----GC-AT
6  -CTGGTTTGAA-------AAG---GAA-TTTC--C-------TT-AG-TAGGATG----CAG----C--GA----TT-AG
7  G----GGTGTA-------TCC---CCG-TTTT--C-------C---------GCG----TTA----AGGAA----TTGAT
8  G----GGTGTA-------TCC---CCG-TTTT--C-------C---------GCG----TTA----AGGAA----TT-GT
9  GCAG-GCTGAACTTGT--AAG---TAGGCTGGGCC-------GG-AT-TT-TCCG----TTATCTAA--AATGAGGG-AT
10  CGGCGAGTAGA-------ACC---GGC-TCGC--G-------AC-CC-CAATGAG----GGG----G--CT----CG-CC
11  GCGGTTAGGAA-------AAC---C----TAA--A-------CG-TT-TCCCGCG----TTA----C--GG----GG-AT
12  TCTGATCTGAA-------AGG---ATT-TTCT--T-------AG-TA-GGATACA----GCG----A--TT----AG-GC
13  GCATTGGTGAACAGGAAGTAG---CCA-ATGA--C-------GT--T-GCCCGCG----TTA----A--GG----GA-CA
14  GCTGAAGCGAG-------TAG---GCA-TTTA--C-------GGGAT-AACCGTTATGTTTG----A--AA----GT-GG

  
0  CAAGT_GAG__TG_CGGCG_TATGCCGCGCTAACGAGGGTGGTACCGCGGGAA______AACGAAAGTCTCTCGTCCCTT
1  TTAAA-GAG--GA-GAGCC-TTTTATAGGCTAACCAGGGTGGTACCGCGAGAG------TTT--AAGCTTTTCGTCCCTT
2  CAAGT-GAG--TG-GCGAC-AGATAATTGGCGGGCCGGCGCGGGCCGTTTTTA------AACGTTGATCAACAATAAAAA
3  CAAGT-GAG--TGTCTTCA-TAGAC---GCTAATTTGGGTGGTACCGCGGGAA------ATA-AAAGCTTCTCGTCCCTG
4  GGAAC-AAG--CA-AAGAA-TGTCGTTTGTTCACTAGGGTGGTACCGCGGGAA------TACCT-----TCTCGTCCCTA
5  CAAGT-GAC--TC-A--CA-AATGAG----TAACGAGAGTGGTACCGCGGGTA------AAAG-------CTCGCCTCTT
6  GCCTT-ATC--GT-TACAC-AAGGCGCCCATTCGGAATTTGGATGGATTAAGT------GAACTGTTTTTGCAGTTAATC
7  AAGTT-GAG--TG--GTCA-AA-----CACTAATGTGGGTGGTACCGCGGGAG------AAGCA---TCTCTCGTCCCAT
8  TAAGTTGAG--TG-G-------TTAAACACTAATGTGGGTGGTACCGCGGGAG------AAGCA---TCTCTCGTCCCAT
9  TAAGG-CAA--AG-CTTTGCTTTGTCTTAATAATTAGGGTGGTACCGCG----------AACT------TCTCGTCCCT-
10  GGAGC-ACA--CG-ACGCA-CCGGCCGGGCCAAGGAGGGTGGTACCGCGGGAG------CACGG----CTCTCGTCCCTC
11  T---T-GAG--CT-GAGCA-CAATTTGTGCTAATGAGGGTGGTACCGCG---------------AACCTTTTCGTCC-TT
12  CTTAT-CGT--TA-CACAA-GGCGCCCATTCGAAATTTGGATGGATTAAGTGA------ACTGTTTTTACAGTTAATCAA
13  CGAGT-GAGCCTT-TAAAG-GA-GCAAGGTTAACGAGGGTGGTACCGCGGGTCGTTTGTTATACAAACCTCTCGTCCCTT
14  AAAAC-GAG--TC-TTTGA-TTTGTTTTC--AATCAGGGTGGCAACGCGAGAG---------------CTCTCGTCCCTT

  
0  T___________TT____GG__G_ATG_AGGGAGTTTT_TTTTAGTTTGGGAATATTCTGAATATAATCCTCTCCTTCCC
1  AG----------TT----GG--G-ATG-AAAG-GCTTT-TTTGATTAAAAAAATTTATTTACTAAAATCCATGAGGGTAA
2  T-----------TA----TC--G-GAA-CTCTGTCACT-GTCGGGACATGCTTACACCCATAAGGAGATAAAGAG-----
3  T-----------TTATGAGG--G-ATG-AGTG-GCTTT-TTTTAGTTTACTCAAAAAATTAAAGTGTAAGCAGTTTTACT
4  A-----------TG----GG--G-ATG-GGGAGGTTTT-TATTTGTTCC---AT----TGAAAACAATCGTTTCCGCCAC
5  T-----------TT----AGAAG-AGG-CGGGTTTTTTATTTTATTGTAGAAAGGATTGGTTAGG---------------
6  A-----------AG----GT--G-GTA-CCACGGGTCT-CTCGTCCTTGTCTAGTATATTTGCTAGGCTTGGAGAGAGGC
7  GGCGATAAGCCGTT----GG--G-ATGTAGGGATTTTT-TTGTAGCCAAAATTCGATATTTTAAGGAAAAGAGGATGAGT
8  GGCGATAAGCCGTT----GG--G-ATGTAGGGATTTTT-TTGTAGCCAAAATTCGATATTTTAAGGAAAAGAGGATGAGT
9  ----------------------G-ACG-AGA-AGTTTT-CTTTTTAGTAGGAAAAATCTTAAAGAGGAGGTAGCGAGA--
10  C-----------GA----CG--G-AAG-GCAGCACGTC-CGCCGGAGGAAGCTCGCTG----------------------
11  T-----------AC----GT--G-ATG-AAAAGGTTTT-TTGTTGTTCTAATAGAAGGAGGATATCA-------------
12  G-----------GT----GG--T-ACC-ACGGGTCTCT-CGTCCTTGTCTAGTATATTTGCTAGGCTTGGAGAGAGGCCC
13  T-----------TT----GG--G-ATG-GGAG-GTTTT-TTACACTTTTTTAAGAAAGTTTAACTTTTGCAAAAGGACTA
14  T-----------AT----GG--GGATG-AGGGC--TCT-TTTTATTTTCGATAAATCAATAAAAAAAGGAGTGTTTCGC-

  
0  GTCAATACTTGAACCATACACGCCGTATTCAATCAGAAGGAGGTTTTTACT_____________________________
1  GTAGTTTATTATAGGAAATAATTTAGGAGGTAATTTT-------------------------------------------
2  --------------------------------------------------------------------------------
3  ATGAAAGGAAGGGTTGAC--------------------------------------------------------------
4  ---AAGGCTTGG-CTATA-ATGGAGTTGCAAATCATTAGGAGGAATGGAA------------------------------
5  --------------------------------------------------------------------------------
6  CCTTTTTTAATTTTATAAAACGAAAACATGAAACAAGAATAGTACTTTTCATCGATTTTCAAAGAGAGTTAGCGTTTGGT
7  AAA-----------------------------------------------------------------------------
8  AAA-----------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  TTTTTTAATTTTATAAAATGAAAACATCAAACAAGAATAGTACTTTTTCATCGATTTTTAAAGAGAGTTAGCGGTTGGTG
13  AAGTATAAGAAAAACAACGGCTTTCGCTATAAGACTTGGCGACAAGCCAAGTTTTTCTAACATACTGACATCGGTTTGTT
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  GCGAGCTAATAAATAGATGAAATAGGAATGGGCCTTGTGCGTGATACCTTGAACTGAAGTAGGGGTGAACGGGAGCTCCC
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  GGAGCTAATAAATAGATGATTCAGGAATGGGCCTTGTGCGTGATACCTTGAAATCAAGTAGGGGTGAACGGGTGCTCCCG
13  AAGAAAAAGGAGGTCGCAACGATC--------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  GTTATAGAGCAGCTGCAAAAAAGCAGCACTGAGATAGGGGGATTCCCCTAAAATGAGGTGGCACCGCGATAACTCGTCCT
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  TTATAGAGCAGCTGCAAATATTGCAGCACGGAGATAGGGTTTATCCCTAAAATGAGGTGGCACCGCGATAACTCGTCCTC
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  _____________________________________________________________________
1  ---------------------------------------------------------------------
2  ---------------------------------------------------------------------
3  ---------------------------------------------------------------------
4  ---------------------------------------------------------------------
5  ---------------------------------------------------------------------
6  CTGAAAAAGCATGATAGTAGGCTTTTTCAGAGGGCTTTTTTTATTTTAATGAAGAAGGGATGATTTAA-
7  ---------------------------------------------------------------------
8  ---------------------------------------------------------------------
9  ---------------------------------------------------------------------
10  ---------------------------------------------------------------------
11  ---------------------------------------------------------------------
12  TGAGAAAGCATGATTTTGCGCTTTTTCAGAGGATTTTTTTATTTTAGTGAAGAAGAAGGGATGATTTAG
13  ---------------------------------------------------------------------
14  ---------------------------------------------------------------------