BLISSBreaker Lab Intergenic Sequence ServerHome

Intergenic view options: Interleaved

NC_000964.1 Bacillus subtilis (- 3036947 to 3037287) circular

Islands  AAGGCGGCG..GACACAGGA....A...A.G..,,,,,.GA.A.AGC..CA.A.G,,,,GG.,,,GA..GAGACAAG.AG
5'-   AAGGCGGCGTTGACACAGGATTTTATTTATGTTAAAAATGATATAGCTTCATATGAAAAGGTAAAGATTGAGACAAGTAG
         |         |         |         |         |         |         |         |  
         3037280   3037270   3037260   3037250   3037240   3037230   3037220   303
         |         |         |         |         |         |         |         |  
3'-   TTCCGCCGCAACTGTGTCCTAAAATAAATACAATTTTTACTATATCGAAGTATACTTTTCCATTTCTAACTCTGTTCATC
Islands  ..CCGCCGCAAC.G.G.CC.,,,,.,,,.ACAA.....AC.A.A.CGAAG.A.AC....CCA...C.AAC.C.G..CA.C

  
Islands  AA.A.CC..ACG..CCAGAGAGC.GA.GGCCGG.G,,,,.CAGCACAGACGGA.A.A.CGAA.ACAC.CA.GAACCGC..
5'-   AATATCCTTACGTTCCAGAGAGCTGATGGCCGGTGAAAATCAGCACAGACGGATATATCGAATACACTCATGAACCGCTT
         |         |         |         |         |         |         |         |  
  7210   3037200   3037190   3037180   3037170   3037160   3037150   3037140   303
         |         |         |         |         |         |         |         |  
3'-   TTATAGGAATGCAAGGTCTCTCGACTACCGGCCACTTTTAGTCGTGTCTGCCTATATAGCTTATGTGAGTACTTGGCGAA
Islands  ..A.AGGAA.GCAAGG.C.C.CGAC.ACCGGCCAC....AG.CG.G.C.GCC.A.A.AGC..A.G.GAG.AC..GGCG,,

  
Islands  ..GC,,,C,,,GCCGGCCAGGC...CAG.AG.G,,,GAACGGACC.GA.CCG..A.CAGGC,,,G.GA.AAGACGAA.G.
5'-   TTGCAAACAAAGCCGGCCAGGCTTTCAGTAGTGAAAGAACGGACCTGATCCGTTATCAGGCAAAGTGATAAGACGAATGT
         |         |         |         |         |         |         |         |  
  7130   3037120   3037110   3037100   3037090   3037080   3037070   3037060   303
         |         |         |         |         |         |         |         |  
3'-   AACGTTTGTTTCGGCCGGTCCGAAAGTCATCACTTTCTTGCCTGGACTAGGCAATAGTCCGTTTCACTATTCTGCTTACA
Islands  ,,CG...G...CGGCCGG.CCG,,,G.CA.CAC...C..GCC.GGAC.AGGCAA.AG.CCG...CAC.A..C.GC..AC,

  
Term (100.00)%  -----------------------------------------CGTCCCTTCGTGTAAACGAAGGGGCG-------------
Islands  ..GCA..C.C..A..AG.AGGG.GG.ACCGCGA.AA.CAA.CG.CCC..CG.G.,,,CGAAGGGGCG......A....AA
5'-   TTGCATTCTCTTATTAGTAGGGTGGTACCGCGATAATCAATCGTCCCTTCGTGTAAACGAAGGGGCGTTTTTTATTTTAA
         |         |         |         |         |         |         |         |  
  7050   3037040   3037030   3037020   3037010   3037000   3036990   3036980   303
         |         |         |         |         |         |         |         |  
3'-   AACGTAAGAGAATAATCATCCCACCATGGCGCTATTAGTTAGCAGGGAAGCACATTTGCTTCCCCGCAAAAAATAAAATT
Islands  ,,CG.AAGAGAA.AA.CA.CCCACCA.GGCGC.A..AG..AGCAGGGAAGCACA...GC..CCCCGC,,,,,,.,,,,..

  
Islands  ..,,,,,,GGAGC...A.C..
5'-   TTAAAAAAGGAGCTTTATCTT
         |         |   
  6970   3036960   3036950   
         |         |   
3'-   AATTTTTTCCTCGAAATAGAA
Islands  AA......CC.CG,,,.AGAA

IGR  -   3036947  3037287  ()  23  tyrS

Blast Hits

ID Organism Class Accession Start End Operon
0 Bacillus subtilis B/C NC_000964.1 - 3036947 3037287 tyrS [COG0162]
1 Oceanobacillus iheyensis B/C NC_004193.1 - 2033858 2034168 alaS [COG0013]
2 Lactobacillus plantarum WCFS1 B/C NC_004567.1 - 2972211 2972646 nha2 [COG1757]
3 Streptococcus mutans UA159 B/C NC_004350.1 + 38417 38632 SMU.33 [-]
4 Streptococcus mutans UA159 B/C NC_004350.1 + 1994681 1994868 SMU.2130 SMU.2131 [COG1275 -]
5 Oceanobacillus iheyensis B/C NC_004193.1 - 560092 560817 OB0527 OB0526 OB0525 OB0524 OB0523 OB0522 OB0521 [COG0147 COG0512 COG0547 COG0134 COG0135 COG0133 COG0159]
6 Clostridium perfringens B/C NC_003366.1 - 2031766 2032093 spoIVA [-]
7 Thermoanaerobacter tengcongensis strain MB4T B/C NC_003869.1 - 1553634 1553963 IleS [COG0060]
8 Clostridium tetani E88 B/C NC_004557.1 + 833146 833604 CTC00787 [COG1114]
9 Mycoplasma penetrans B/C NC_004432.1 + 467510 467709 MYPE3600 [-]
10 Listeria monocytogenes strain EGD B/C NC_003210.1 - 1642544 1642864 tyrS [COG0162]
11 Listeria innocua Clip11262 B/C NC_003212.1 - 1650722 1651042 tyrS [COG0162]
12 Listeria innocua Clip11262 B/C NC_003212.1 + 1191579 1191943 pheS pheT [COG0016 COG0073|COG0072]
13 Staphylococcus epidermidis ATCC 12228 B/C NC_004461.1 - 1329132 1329459 SE1301 [COG0013]
14 Lactococcus lactis subsp. lactis B/C NC_002662.1 - 1349046 1349212 pabA pabB [COG0512 COG0147|COG0115]
15 Lactobacillus plantarum WCFS1 B/C NC_004567.1 - 1780511 1780832 glyQ glyS [COG0752 COG0751]
16 Listeria monocytogenes strain EGD B/C NC_003210.1 + 1240682 1241047 pheS pheT [COG0016 COG0073|COG0072]
17 Rickettsia prowazekii strain Madrid E P-a NC_000963.1 + 423766 423877 RP346 [COG0109]
18 Haemophilus influenzae Rd P-g NC_000907.1 + 1752702 1752982 HI1683 [COG4657]
19 Chlorobium tepidum TLS Ch NC_002932.3 - 1484787 1484943 CT1574 [COG1162]
20 Mycoplasma pulmonis B/C NC_002771.1 - 508188 508258 MYPU_4210 [COG1226]
21 Staphylococcus aureus subsp. aureus N315 B/C NC_002745.1 - 1649122 1649463 alaS [COG0013]
22 Bacillus halodurans B/C NC_002570.1 - 2322178 2322643 BH2200 [COG0180]

0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  TGGGGGAAATAAGTGGCTTTCATAAAGAAAAAAGAAGTTGAACAGTTTAGAGTTTTTGCATTAGAATTGAATAGCTTTGT
4  --------------------------------------------------------------------------------
5  GCGAGAATGCATTTATCAATTGGTGGGTATCTTGATTAAATAAGTAGCCCTTAAAAAAACTTTTAAAAAAGTTATTGACA
6  AATTTGATTTAAAAGAGATAGAAAATTTTCTATCTCTTTTTATTTTAATTAA----------------------------
7  ATTTTAATTGTATTG-----------------------------------------------------------------
8  CAAGTGAAAAATTAAGTATACATAAGATAAATTATTATAATGATAA----------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  AAAGAGATAATCTCTCCAACTAATATGGGGAGATTA--------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------
16  AAAAGAAATAATCTCTCCAACCAATATGGAGAGATTA-------------------------------------------
17  --------------------------------------------------------------------------------
18  --------------------------------------------------------------------------------
19  TTGCCGGATTGCCCGATTTT------------------------------------------------------------
20  --------------------------------------------------------------------------------
21  --------------------------------------------------------------------------------
22  AAGGAAAAA-----------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  TGAGGATCCCTTCAAGCAAGAATATTCTGAAGCAATAACTCCAGAACTAGCTGCTATTC---------------------
4  --------------------------------------------------------------------------------
5  ATTACTTGTCCCATCCGGTAAGATAAATTCAACAAATTGATGAATCGGCACTGACGAAGAAGAGTACTTAATAAAAACCC
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------
16  --------------------------------------------------------------------------------
17  --------------------------------------------------------------------------------
18  --------------------------------------------------------------------------------
19  --------------------------------------------------------------------------------
20  --------------------------------------------------------------------------------
21  --------------------------------------------------------------------------------
22  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  TAAAGAGAGCTGATGGTTGGTGAGAATCAGCGGGATATTTTATTAAGGAATGGACTTCTGAGCTCCAAACCGAACCGTTA
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------
16  --------------------------------------------------------------------------------
17  --------------------------------------------------------------------------------
18  --------------------------------------------------------------------------------
19  --------------------------------------------------------------------------------
20  --------------------------------------------------------------------------------
21  --------------------------------------------------------------------------------
22  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  ACTGAAGTAGGCCTTGGCGAATTCGTCTCTCGTTATCGAGACTAAGTAGATAATTTATTATCTTACTTTCAAAGTGAGCT
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------
16  --------------------------------------------------------------------------------
17  --------------------------------------------------------------------------------
18  --------------------------------------------------------------------------------
19  --------------------------------------------------------------------------------
20  --------------------------------------------------------------------------------
21  --------------------------------------------------------------------------------
22  --------------------------------------------------------------------------------

  
0  _____________________________AAGGCGGCGTTGACA_CAGGATTTT_ATT_TAT___GTTAAAAAT____GA
1  -------------------------------------------------------------A---TTGACTATT----GA
2  ---------------------------------CCTTAAAATGA-GAATTATAT-TAT-AAA---ATGGCTTGA----CG
3  -----------------------------TAGGCGGAGTTGGCA-CAGGATTTTTAGG-TAT---CTCCACAAT----TT
4  --------------------------------------------------------------------------------
5  GAACTTCAGCTAATAAAGGTGGTACCACGGTCCCTCGTCCTTTT-TAGGATTAG-GGG-CTT---TTTTGTATT----CA
6  -----------------------------AAGTGGGCCGTGTTA-AAAAATATT-TTT-TATGTAGTTATAAATTTATGC
7  -----------------------------ACTTAATGGAGGATG-TGTTATATA-ATT-TGA---GT-AAAAAT----AA
8  -----------------------------AGTATCAATTTGAAA-TATAGTTAT-AAA-TAT---AATAAAA-T----AC
9  --------------------------------------------------------------------------------
10  -------------------------------------GTTGACA-GCATTTTTA-ACGGTAT---GTTATAAAT----G-
11  -------------------------------------GTTGACAGCATTTTTAG-CGG-TAT---GTTATAAAT----G-
12  -----------------------------TTTTTTAGCTTGAAT-CTTTCGTAG-AAC-CAT---ACTATAATA----GA
13  -------------------------------------------------------CAA-ATC---AATAAAAAG----AA
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------
16  -----------------------------TTTTTTAGCTTGAAT-CTTTCCTAG-AAC-CAT---ACTATAATA----GA
17  --------------------------------------------------------------------------------
18  --------------------------------------------------------------------------------
19  -----------------------------CTTGCTCCATTCATA-TTCACCAGA-TGC-TGT---TCGTGGAAA----GT
20  --------------------------------------------------------------------------------
21  --------------------------------------------------------------------------------
22  -----------------------------ACGATTGCTTTGACG-AGGTCCCCA-GTA-TAG---AATGAAGGT----AG

  
0  TA_TAGCTT_CATA__TGA_AAAGGTAAA_GATT__GA___GAC_AAGTA_GA___A___TA_TCCTTA___CG_T_TCC
1  GG-TTAAAT-TTTA--TAT-AATTGCGCT-ATCA--TA---ATA-AGACT-AA---T---CA-CGTAGA---AG-G-TAA
2  AT-GATAAA-AGAT--GGT-GGTATTGTT-AATC--AC---AAG-TTAAT-AA---C---TG-TACGAT---AA-C-GTT
3  TT-ACTTGG-TTAT--CTG-GAATGTCAG-GTGC--TC---AGA-TT---------------------------------
4  --------------------------------------------------------------------------------
5  TA-CAACTA-AATAATTGC-AAAATCATT-GAGT--AA---GAG-GAGTA--A---A---TA-TTCAGGAATCG-T-TAC
6  TA-AGTCTTACATA--TAA-AAAA-TAAA-AATA--TT---TAA-AA-TA--A---A---TA-GCATTA---AT-T-TAG
7  TA-TCGG----------GA-AAAGCTATG-AAGA--G----GAC-GAGTA-GG-------TA-GAAGCG---GC-T-TTC
8  TT-TAA--T-AATA--TGATAAAAATTAT-GATG--GA---AAG-CAGTA-AT---TG--TA-TGATTT---A----TAA
9  --------------------------------------------------------------------------------
10  TA-TGTATA-CTTT--TCA-TAACGAAAATGACTATGAACGGACGAAGTA-GTTGCT---TA-TTCTTA------T-TCC
11  TA-TGTATA-CTTT--TCA-TAACGAAAATGACTATGAACGGACGAAGTA-GTTGCT---TA-TTCTTA------T-TCC
12  AACTATCTA-AATA--AGT-AAAGACAAT-GAAA--GA---GCC-AAGTA-GC---A---TAGTGAGTC---TG-TATAG
13  AA-TAAAAT-GAAA--TTA-A---GTAAG-TATA--GA---GAC-GAGTA--A---A---TA-ACTTTT---GAAT-TAT
14  --------------------------------------------------------------------------------
15  ------------------------------------------------CA-AA---C---GA-ACGACC---AT-C-AGC
16  AACTATCTA-AATA--ACT-AAAGACAAT-GAAA--GA---GCC-AAGTA-GC---A---TAGTGAGTC---TG-TATAG
17  --------------------------------------------------------------------------------
18  --------------------------------------------------------------------------------
19  GA-AATGCT-TATA--TTT-TCTTCCTTT-TGGA--GC---TTC-GCTTC-TT---G---CC-GGACTG---TC-G-ATG
20  --------------------------------------------------------------------------------
21  -----------------------------------------------CAA-CA---A---GC-GTAAAT---GT-A-ACT
22  TT-CGAGAA-TGCA--TAT-GTTTGCAAT-GATG--AA---GAA-GAGTATGA---ATCGTA-TCCT------G-T-TCT

  
0  _AGAGAGCTGATGGCCGG_TGAAAATC_AGC__ACAGACGGATA_TATCGAAT_AC_ACTCATGAACCGCTTTTGCAAAC
1  -GAGTACATGAAAGTAGT-TGTTTTAA-GAG--AGGTGTTCTCT-AAGGCTGC-AA-GGGACACTATACAGCTATCATGG
2  -ACATCAAGTAGACATAG-TGGTAGGT-GTC--AGGAAGCCGGT-GGTTGCTG-CG-AACCGGTCAGCTACTATGATTGA
3  --------------------------------------------------------------------------------
4  ------------------------------------------------------------------TGTCTGCTCCTTTA
5  -AGAGAGCTAGAGGTTGG-TGAAATTCTAGC--AC-GCCGAAGAGTATTGAAT-GG-ACTTACGAGAGTTTTCTTGAAGC
6  -ATTTTTTTGAATAAATA-ATATTAAT-ACA--TAATATTAGAA-AGAGAAAG-TT-GAAGTTTAAATAAAGGAGTTAAA
7  -AGAGAGTTGGCGGTTGG-TGCGAGCC-AAT--AAGTTCGTTTC-TACTGAAA-AT-CCCCTCGGAGC-----TGCA---
8  -AGAGAGGCAATGGTTGG-TGGAAATT--GC--TTAAAGAG-TA-CAATGAA--AC-ATTCATT--CCTGAATTGCAGGC
9  --------------------------------------------------------------------------------
10  TAGAGAGCTAGTGGTTGG-TGGAAACT-AGT--AGAGGTAAGTA-GA-CGAATTAC-ATCCCGGAGTCAC----------
11  TAGAGAGCTAGTGGTTGG-TGGAAACT-AGT--AGAGATAAGTA-GA-CGAATTAC-ATCCCGGAGTCAC----------
12  -GGAGAAGTGGTCATAGACTGAAAGCC-ACTTTACAAACGAATT-TG-CGAA---C-ATTTCACCTCTGGAGTCGCCCCC
13  -AGAGATGTACTGGTTGG-TGAAAA----GT--ACAAACAAAAT-TATTGAAT-GCTACTCTATATTAGTT-----AAAT
14  --------------------------------------------------------------------------------
15  -TATGATGATGAAGAACT-GAATAGTT-AAG--TGTTGATGAGA-GAAGGTTA-AC-GGATTCGACTTACAGTGAGACCG
16  -GGAGAAGTGGTCATAGACTGAAAGCC-ACTTTACAAACGAATT-TGT-GAAC-AT------TTCACCTCT---GGAGTC
17  --------------------------------------------------------------------------------
18  ----------------------------------------------------A-CA-TTTACCCACAAAAAAGAAGTTTT
19  -AACGTCGTGTTGGCCGG-TGATAATC-AGC--ACAGCCTTTTT-GC---------------------------------
20  --------------------------------------------------------------------------------
21  -AAAATAGAATTAAATTC-GTATAAAG-ATG--AGTAGTTAATG-ATTTGTTT-AT-CAGAGATGTACTGGTTGGTGAAA
22  -AGAGAGCTGATGGTCGG-TGGAAATC-AGT--ACAGAAACGAT-GCAGAATG-GG-CTTCGGAGCATCCAAACCGAACG

  
0  __AAAGCCGGCCAGG_CTT_TCAGTAGTGAAAGAA___CGGA__C_CTGATCCGTTA_TC_AGGCA_AAGTGA_T_AAGA
1  --AAAGCTATGCCTG-AGT-ACGGCTAATCACCGT---CGGT--T-TCACACCGTTACTA-TGACATAAGTGA-T-----
2  --AATACGGTAACCG-AGT-TTCGACTGAACGGAT---AATA--A-CTAGAACCGTT-AT-CTTCT-AGTGAG-T-GGTG
3  --------------------------------------------------------------------------------
4  --CTAAAGTCATTTG-CTA-TATTTTCCCATAAAT---AGAC--A-TTTTTTTCAAT-GT-CTAAT-ACTCGA-T-AGTT
5  --ATT-------AGA-CT----AGTAGGGAAA-AA---CGGG--T-TTCCGCCGTTA-TA-CGGAT-AGGATA-T-CGGA
6  --AAGTATATCCAAT-TAA-AGTAAAAATATATTT---TGCT--A-AACAGTATACT-TT-TTCAA-AGTTTC-T-AATA
7  --------GGCTGAA-CTTGTAAGTAG-GCTGGGC---CGGA--T-TT--TCCGTTA-TCTAAAAT-GAGGGA-TTAAGG
8  TGAAAAAAATTTAAA-TTT-TTAGTAGGCTGAGC----CGGATAC-CTAA--CGTTAATA-AGG-----GTAT-A-AAGA
9  --------------------------------------------------------------------------------
10  -----GCTGCGCAGG-AT----AATGGCGCAGC-----CGGT--G-TTGAGCCGTTA-TT-TTTTG-AAGT-----AGGA
11  -----GCTGCACAGG-AT----AATGGTGC--GGC---CGGT--G-TTGAGCCGTTA-TT-TTTTG-AAGT--------A
12  --CGAGAAG--CACG-TTA-TGTGTGAAGGTGGTC---CGGT--TACTAAGCCGTTA-TC---GAA-TTTTGAGT-GGGA
13  --AAAGTATACAAAG-TGA-TAAGAAATAGTAGA----CAAA--C-AAAAT-------TC-AAGTA----TGT-A-AATA
14  -----TCTTTAAAAT-TCA-TATACTTTCAAAAAA---GGAC--T-TAATTTTAGTT-CT-TTTTT-GAAATA-T-GTAA
15  --TGATGGTGAAAAA-CGG-TCAGTCAAAGTCGTT---AATT--G-GCGCTTTCGGA-GC-TTTAA-TACCGT-G-TAAT
16  --GCCGCCGGGAAGCACAA-GTAGT-GTGAAGGTGGTCCGGT--TACTAAGCCGTTA-TC---GAA-TTATGAGT-GGGA
17  ----------------------------------------------------------------------TGT-T-AATA
18  --TATTTCTATGTTT-ACA-AGACAAATCTTTGTC---ATTA--A-GATACTCGCCG-AT-CTTTA-GGGGTT-T-TATT
19  --------------------------------------------------------------------------------
20  --------------------------------------------------------------------------------
21  --AGTACAACAAACA-TTA-GTGAACGCTACTTTA---TGCA--C-AACTGTATAGT-CG-ATTTA-AAGTGA-T-AA--
22  --GGAATGGATCCTT-AGT-AGGCTTTGGCGATAG---GTCT--C-GTCGTTACATG-AG-ACACT-TGTTCT-C-GAGT

  
0  CGAATGT_TTGCATT_CTCTTATTAGT_AGGGTGGTACCGCGA_TAA_TC_AAT_CGTCCCT_____TCG______TGTA
1  -GAATAA-TTAACTT-TATTCATAATT-AGGGTGGTACCGCGA-TA--TC---T-CGTCCCT-----GCA------TGTT
2  GATTAAG-TGTCAAT-AATCCGCAACC-TGGGTGGTACCGCGACTAG-TCTAAT-CGTCCCTGTTGTTCA------TATG
3  --------------------------------------------------------------------------------
4  ATCATTT-TTGTAAA-AAAGGTTTCTT-CTTTGTTCAAGAATT-GCG-AG-AGA-GGTAAAT-----AGG------TTTT
5  GCATAAC-TTCTCCC-GTATCTGAAAA-CGAGTTGGGAAGATT-TCT-TT-CCA-AATGAGG-----TGG------CACC
6  TATATAT-AGTGTTA-ATAATATTTAT-AGGAGGGTGTATC---------------------------------------
7  CAAAGCT-TTGCTTT-GTCTTAATAATTAGGGTGGTACCGCGA-ACT-TC---T-CGTCCCT-----GAC------GAGA
8  GGATTTG-TGTCAAT-CA------AAT-TGGGTGGTACCGCGAATAA-T--AAT-CGTCCCT-----T-G------T---
9  ----------------------------------TTATTAAAT-TAT-TA-AAA-CTAAATT-----CCA------AAAA
10  ------T-TT--ATT-CC--TAAAAGT-AGGGTGGTACCACGT-TAA-TT-AATACGTCCCT-----TCGCTAAACTGTT
11  GGATTTT-TTCC--------TAAAAGT-AGGGTGGTACCACGT-TAA-TT-AATACGTCCCT-----TCGCTAAACTGTT
12  ACAAATT-TTG--------TTCTTATT-AGGGTGGTACCGCGA-GAAGTC---T-CGTCCCT-----TTG------TGGA
13  GG------TCACAAT--TCTTATAACT-AGGGTGGTACCGCGA-TAA--C-GTT-CGTCCCT-----TTG------TGGA
14  ATTAATT-AATTTAT-GAGGAAATATT-CGCTTTATAGATTTG-AAA-TT-AGA-CTGATTA-----AAA------TACT
15  TAAGCTG-CTGAGGT-TACTCAGAAGT-AGGGTGGAACCGCGA--AA-CC-AAT-CGTCCCTATG--TCGTTAT--TGTC
16  ACAATTT-TT-------TGTTCTTATT-AGGGTGGTACCGCGA-GAAGTC---T-CGTCCCT-----TTG------TGGA
17  TCCTTAA-CTTTTTA-ATTACAAAAAA-ATATATACATTTCTT-GTA-TC-AAA-GTCAATC-----ATT------GATT
18  ATATTTA-ATTCATA-AATCAAGTTGA-GTATTGTTAATCCAA-ATA-TT-GCG-CAGCTAA-----TCG------TTTA
19  --------------------------------------------------------------------------------
20  ---------------------------------TTTTTAAAAA-TAA-GT-TAG-GTAAAAG-----CTA------ACTT
21  ---ATGTGTTGAATTGCATTTATAACT-AGGGTGGTACCGCGA-TAA--C-GTT-CGTCCCT-----T----------TT
22  TGTGATG-ACAAGGA-AGCAGGGTTAT-TTATTGACCAATGAA-GGT-GG-TAC-CGCGGGC-----TCT------CCCG

  
0  A_A_CGA__AGGGG_CGTTTTT_TAT_T_T____T__AAT__TAAAAA__AGGAGCTTTATCTT________________
1  GCA-GTG--AGGGG-ATTTTTT-TAT-T-GGCTGT--AAT--TTTAAA---GGAGGATAATAATT---------------
2  A-A-CAA--TGGGGACGATTTT-T-T-T-T----T--GAT--GAAGAG--GATGAGAATAATGACAAATCAACGCTGTGG
3  --------------------------------------------------------------------------------
4  A-T-GAT--AGAAT-AAAGATG-ATA-A-A----T--AAG--TAAAAA--AGGAGCTTTATAGAG---------------
5  G-C-GGT--TCCTA-TCGTCCT-CTA-T-A----A--GCA--CACTAG--CTGTGTTTATAGGGGACTTTTTTTATTCAA
6  --------------------------------------------------------------------------------
7  A-G-TTT--TCTTT-TTAGTAG-GAA-A-A----A--TCT--TAAAGA--GGAGGTAGCGAGA-----------------
8  ------A--GGGGG-CGTTTTT-T-T-A-T----T--AGG--TATTTT--TTATTCAATTGGGTTATGCAAATCAACTAG
9  A-G-TGG--GATTT-AGTTTTT-TAT-T-T----T--ACT--TAAAAC--TAAAAATTTTATGCTTTGTAAAATTTGAAA
10  T-AGCGG--AGGGG-CGTTTTT-TATGT-C----C--AAA--AATAAA--AGGAGAATGATGAAA---------------
11  T-AGCGG--AGGGG-CGTTTTT-TATGT-C----C--AAA--AATAAA--AGGAGAATGATGAAA---------------
12  T-A--------GAG-C-TTTTT-TAT-T-T----T--GTC--TAAAAAGAAGGAGTGAACGGT-----------------
13  T----GA--A-----CGTTTTTATAT-TCT----T--GAA--TAATAC--TCAACTATGACTATCTAACTGCGATAACAA
14  T-A-ACT--TAATA-AATATTT-TAG-T-A----T--AAT--TAAAAA--AGGAGGCTGAA-------------------
15  G-A-CGAC-AGGGG-ACTTTTT-TTG-T-G----C--CAT--AAGTCT--GGGAATAGCGATGCCCCCGTTTCAAAGCCA
16  T-A--------GAG-C-TTTTT-TAT-T-T----T--GTC--TAAAAAGAAGGAGTGAACGGT-----------------
17  T-T-TAA--CCTAA-TATTTTT-TATAT-T----T--AAT--TAAAAA--ATATTGCAT---------------------
18  A-A-TGATTAGCTG-CGTTTTT-TAT-T-T----T--AAT--AACAAA--ATCGCAACTTACCATTTCCCCTTAGCAAAA
19  --------------------------------------------------------------------------------
20  A-T-TTT--TTTAT-CAAATTT-TAT-T-T----T--AAT--TAAAAA--TTAATTT-----------------------
21  G-A-GGA--TGGG--CGTTTTT-TAT-T-T----TTTAATAATAAAAA--ATGATATTGATTTATACTAGTTTTTCAAAT
22  T-C-CTT--TTCTA-AGGATGG-GGG-A-G----C--TTT--TTTGGT--GGTCCTACACCTTGTCAGAACTAAATGTAA

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  TGGGATTGCACGATATTAAAATTTTAATGATGAATATGCGTCACTGGAATTTTATCAATCGAAGGGGTAATAAATT----
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  TTACTTTTAAATAAGGAGTCGAAGAC------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  GGTGGTAACACGGAGCATCGTCCCTTTAGGGATGATGCTCTTTTTTAATTCAAATATAAAAATAAAAAAGGGGGATTTAT
9  GTTGGTCTGTAATATTAGATAATTAATAGTAGTGTGTTTAATTATTTGATCTAAATAATTTAAATTTAAAACTAACTAAT
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  AAACGTATGAAGGAGAGTTTTTATTT------------------------------------------------------
14  --------------------------------------------------------------------------------
15  TCAGCCGTTCAGTCACTAATTTTGGGAGGATACTA---------------------------------------------
16  --------------------------------------------------------------------------------
17  --------------------------------------------------------------------------------
18  TTTTCTATTGTTCTTGCTTCCATAAATAGGGATAATAACGCCCCTATTCAAAAGGCAAAAAATA----------------
19  --------------------------------------------------------------------------------
20  --------------------------------------------------------------------------------
21  CGACTATCTGTGTCATCAATTTTTATGGAATGGTAATTTAAAAACAGTAAATAGGATGTGTAAAAG--------------
22  ATATAAAGGAAGAGGTGACGACTATGGAAGACGGTTGGTGGGAAAGCGATTTGTTGATGATCTTCAATCAATTAACCTTT

  
0  ___________________________
1  ---------------------------
2  ---------------------------
3  ---------------------------
4  ---------------------------
5  ---------------------------
6  ---------------------------
7  ---------------------------
8  T--------------------------
9  CATTATTTTCATTAATGGGAGAATATT
10  ---------------------------
11  ---------------------------
12  ---------------------------
13  ---------------------------
14  ---------------------------
15  ---------------------------
16  ---------------------------
17  ---------------------------
18  ---------------------------
19  ---------------------------
20  ---------------------------
21  ---------------------------
22  CGAAACAGGAGGACTTTTT--------