BLISSBreaker Lab Intergenic Sequence ServerHome

Intergenic view options: Interleaved

NC_000964.1 Bacillus subtilis (- 2896072 to 2896886) circular

Islands  CG.A.CACC....C...GCAAGA.A.CA..AA.G.A.GCCGAGGGAACAAGAGAAG.GCC.A.CCG,,,..G,,,.GGA.
5'-   CGTATCACCTTTTCTTTGCAAGATATCATTAATGTATGCCGAGGGAACAAGAGAAGTGCCTATCCGAAATTGAAATGGAT
        |         |         |         |         |         |         |         |   
        2896880   2896870   2896860   2896850   2896840   2896830   2896820   2896
        |         |         |         |         |         |         |         |   
3'-   GCATAGTGGAAAAGAAACGTTCTATAGTAATTACATACGGCTCCCTTGTTCTCTTCACGGATAGGCTTTAACTTTACCTA
Islands  GCA.AG.GG,,,,G,,,CG..C.A.AG.AA..ACA.ACGGC.CCC..G..C.C..CACGGA.AGGC...AAC...ACC.A

  
Islands  .GCAAGA.GA.C.G.CAGAC.CAA.CCA.A.ACGAACCA.A.CG.G..A.,,,,.C..CCA.G...A.A.,,,,..,,,.
5'-   TGCAAGATGATCTGTCAGACTCAATCCATATACGAACCATATCGTGTTATAAAATCTTCCATGTTTATATAAAATTAAAT
        |         |         |         |         |         |         |         |   
  810   2896800   2896790   2896780   2896770   2896760   2896750   2896740   2896
        |         |         |         |         |         |         |         |   
3'-   ACGTTCTACTAGACAGTCTGAGTTAGGTATATGCTTGGTATAGCACAATATTTTAGAAGGTACAAATATATTTTAATTTA
Islands  ACG..C.AC.AGACAG.C.GAG..AGG.A.A.GC..GG.A.AGCACAA.A....AGAAGG.AC,,,.A.A....AA...A

  
Islands  AA..C.GG.G.A..C..GA.AGA..AA.,,,,,,,..A.,,,,,C....AACA...GCAA..CC....G.ACCAA.AA.G
5'-   AATTCTGGTGTATTCTTGATAGATTAATAAAAAAATTATAAAAACTTTTAACATTTGCAATTCCTTTTGTACCAATAATG
        |         |         |         |         |         |         |         |   
  730   2896720   2896710   2896700   2896690   2896680   2896670   2896660   2896
        |         |         |         |         |         |         |         |   
3'-   TTAAGACCACATAAGAACTATCTAATTATTTTTTTAATATTTTTGAAAATTGTAAACGTTAAGGAAAACATGGTTATTAC
Islands  ..AAGACCACA.AAGAAC.A.C.AA..A.......AA.A.....G,,,,..G.,,,CG..AAGG,,,,CA.GG..A..AC

  
Islands  ,,,GCG.A.ACAA.A.AGA..GA..AA.C,,,,..G.C.AA.AA....,,,,,,.GC.G..GACAC.GCG.CC,,,GCGG
5'-   AAAGCGTATACAATATAGATTGATTAATCAAAATTGTCTAATAATTTTAAAAAATGCTGTTGACACTGCGTCCAAAGCGG
        |         |         |         |         |         |         |         |   
  650   2896640   2896630   2896620   2896610   2896600   2896590   2896580   2896
        |         |         |         |         |         |         |         |   
3'-   TTTCGCATATGTTATATCTAACTAATTAGTTTTAACAGATTATTAAAATTTTTTACGACAACTGTGACGCAGGTTTCGCC
Islands  ...CGCA.A.G..A.A.C.AAC.AA..AG....AACAGA..A..,,,,......ACGACAAC.G.GACGCAGG...CGCC

  
Islands  CG.AA.A.GAG..CAAC,,,,GA.,,,.GCAAGC..CACAAGCG,,,,.CA.CGCAG.A.GA..C.,,,,,,,.G,,,,,
5'-   CGTAATATGAGTTCAACAAAAGATAAATGCAAGCTTCACAAGCGAAAATCATCGCAGTATGATTCTAAAAAAATGAAAAA
        |         |         |         |         |         |         |         |   
  570   2896560   2896550   2896540   2896530   2896520   2896510   2896500   2896
        |         |         |         |         |         |         |         |   
3'-   GCATTATACTCAAGTTGTTTTCTATTTACGTTCGAAGTGTTCGCTTTTAGTAGCGTCATACTAAGATTTTTTTACTTTTT
Islands  GCA..A.AC.CAAG..G....C.A...ACG..CGAAG.G..CGC....AG.AGCG.CA.AC.AAGA.......AC.....

  
Islands  C,,,CGACC..C..GAACAGC.GG,,,GCCG..CCGAAGGC.GAA.A.G,,,,GCGCAGA.GAGGA.AAG.AGCC..GA.
5'-   CAAACGACCTTCTTGAACAGCTGGAAAGCCGTTCCGAAGGCTGAATATGAAAAGCGCAGATGAGGATAAGTAGCCTTGAT
        |         |         |         |         |         |         |         |   
  490   2896480   2896470   2896460   2896450   2896440   2896430   2896420   2896
        |         |         |         |         |         |         |         |   
3'-   GTTTGCTGGAAGAACTTGTCGACCTTTCGGCAAGGCTTCCGACTTATACTTTTCGCGTCTACTCCTATTCATCGGAACTA
Islands  G...GC.GGAAGAAC..G.CGACC...CGGCAAGGC..CCGAC..A.AC....CGCG.C.AC.CC.A..CA.CGGAAC.A
Term (50.72)%  -------GGAAGAACTTGTCGACCTTTCGGCAAGGCTTCC----------------------------------------

  
Islands  ,,,G....CCACAGAGAACCGGG..AGC.GAGAACCGGCGAAGC...ACAAGG.GAAC.CGCC.CAGAG.GCCAG.C.G,
5'-   AAAGTTTTCCACAGAGAACCGGGTTAGCTGAGAACCGGCGAAGCTTTACAAGGTGAACTCGCCTCAGAGTGCCAGTCTGA
        |         |         |         |         |         |         |         |   
  410   2896400   2896390   2896380   2896370   2896360   2896350   2896340   2896
        |         |         |         |         |         |         |         |   
3'-   TTTCAAAAGGTGTCTCTTGGCCCAATCGACTCTTGGCCGCTTCGAAATGTTCCACTTGAGCGGAGTCTCACGGTCAGACT
Islands  ...C,,,,GG.G.C.C..GGCCCAA.CGAC.C..GGCCGC..CG,,,.G..CCAC..GAGCGGAG.C.CACGG.CAGAC.

  
Islands  ,,.GACAG.AGGAC..GGCCGGG.GAAC..GA..CAC.CG..AC.,,,GCGGA.AG,,,.A.CCA.GAGACGGCCGA..A
5'-   AATGACAGTAGGACTTGGCCGGGTGAACTTGATTCACTCGTTACTAAAGCGGATAGAAATATCCATGAGACGGCCGATTA
        |         |         |         |         |         |         |         |   
  330   2896320   2896310   2896300   2896290   2896280   2896270   2896260   2896
        |         |         |         |         |         |         |         |   
3'-   TTACTGTCATCCTGAACCGGCCCACTTGAACTAAGTGAGCAATGATTTCGCCTATCTTTATAGGTACTCTGCCGGCTAAT
Islands  ..AC.G.CA.CC.GAACCGGCCCAC..GAAC.AAG.GAGCAA.GA...CGCC.A.C...A.AGG.AC.C.GCCGGC.AA.

  
Islands  ACAGGCCG.,,,CAAGGG.GG.ACCGCGG,,,G,,,,GCC....CGCCCC....AGC.A.CGCAG..AC.GCGCGGC.GA
5'-   ACAGGCCGTAAACAAGGGTGGTACCGCGGAAAGAAAAGCCTTTTCGCCCCTTTTAGCTATCGCAGTTACTGCGCGGCTGA
        |         |         |         |         |         |         |         |   
  250   2896240   2896230   2896220   2896210   2896200   2896190   2896180   2896
        |         |         |         |         |         |         |         |   
3'-   TGTCCGGCATTTGTTCCCACCATGGCGCCTTTCTTTTCGGAAAAGCGGGGAAAATCGATAGCGTCAATGACGCGCCGACT
Islands  .G.CCGGCA...G..CCCACCA.GGCGCC...C....CGG,,,,GCGGGG,,,,.CGA.AGCG.CAA.GACGCGCCGAC.

  
Islands  ..G.GGGCGGAAGGGC.......A..GAA.AA.CAGC.A.C.AGC.AA.G,,,,GA.GA.C...,,,GGA.G,,,,.CC,
5'-   TTGTGGGCGGAAGGGCTTTTTTTATTGAATAATCAGCTATCTAGCTAATGAAAAGATGATCTTTAAAGGATGAAAATCCA
        |         |         |         |         |         |         |         |   
  170   2896160   2896150   2896140   2896130   2896120   2896110   2896100   2896
        |         |         |         |         |         |         |         |   
3'-   AACACCCGCCTTCCCGAAAAAAATAACTTATTAGTCGATAGATCGATTACTTTTCTACTAGAAATTTCCTACTTTTAGGT
Islands  AACACCCGCC..CCCG,,,,,,,.AAC..A..AG.CGA.AGA.CGA..AC....C.AC.AG,,,...CC.AC....AGG.

  
Islands  ,,,GGAGGAAC.,,,
5'-   AAAGGAGGAACTAAA
        |        
  090   2896080   
        |        
3'-   TTTCCTCCTTGATTT
Islands  ...CC.CC..GA...

IGR  -   2896072  2896886  ()  18  ilvB ilvN ilvC leuA leuB

Blast Hits

ID Organism Class Accession Start End Operon
0 Bacillus subtilis B/C NC_000964.1 - 2896072 2896886 ilvB ilvN ilvC leuA leuB [COG0028 COG0440 COG0059 COG0119 COG0473]
1 Oceanobacillus iheyensis B/C NC_004193.1 - 2168159 2168513 OB2131 OB2130 [COG0016 COG0073|COG0072]
2 Oceanobacillus iheyensis B/C NC_004193.1 - 2359437 2359889 leuS [COG0495]
3 Oceanobacillus iheyensis B/C NC_004193.1 - 2256085 2256473 tyrS [COG0162]
4 Mycoplasma penetrans B/C NC_004432.1 + 612281 612491 MYPE4770 [COG2189]
5 Clostridium acetobutylicum ATCC824 B/C NC_003030.1 - 2318344 2318717 CAC2227 [COG0560]
6 Clostridium acetobutylicum ATCC824 B/C NC_003030.1 - 2453370 2453562 CAC2341 mutS1 CAC2339 [COG0826 COG1193 COG1683]
7 Listeria monocytogenes strain EGD B/C NC_003210.1 - 2099942 2100223 ileS [COG0060]
8 Oceanobacillus iheyensis B/C NC_004193.1 - 2089360 2089781 valS [COG0525]
9 Clostridium perfringens B/C NC_003366.1 + 1360342 1360548 CPE1162 [-]
10 Oceanobacillus iheyensis B/C NC_004193.1 + 1093780 1094301 proB proA [COG0263 COG0014]
11 Escherichia coli K12 P-g NC_000913.1 + 2898371 2898613 yqcE ygcE [COG0477 COG1070]
12 Lactobacillus plantarum WCFS1 B/C NC_004567.1 - 2282382 2282846 hisX hisG hisD [COG3705 COG0040 COG0141]
13 Lactobacillus plantarum WCFS1 B/C NC_004567.1 + 1422890 1423216 pheS pheT [COG0016 COG0073|COG0072]
14 Listeria innocua Clip11262 B/C NC_003212.1 - 2151454 2151735 ileS [COG0060]
15 Bacillus halodurans B/C NC_002570.1 - 3183427 3183792 BH3061 [COG0028]
16 Ureaplasma urealyticum B/C NC_002162.1 + 72409 72607 smpB msbA-1 msbA-2 [COG0691 COG1132 COG1132]
17 Treponema pallidum Sp NC_000919.1 - 200928 201074 TP0184 TP0183 [COG0691 -]

0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  GTAATAGTAATTAGTTTAGACATAAATGTATACTAAAGAAGGAGTTTGTCCTCTTTGGTTTCATTTATATAAAATTAAAT
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------
16  --------------------------------------------------------------------------------
17  AAAACG--------------------------------------------------------------------------

  
0  ___________________________CGTATCACCTTTTCTTTGCAAGATATCATTAATGTATGCCGAGGGAACAAGAG
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  -----------------------------------------------CATGGGTTTGGAATTAACTTTCCTGATAACAAT
5  ATATAAGGAATAGAAGTCTATATAGGATTTTTGTCGTTAACATAGAATTTCGGTATTTGAAAATGTGACTTATTTATGTA
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------
16  --------------------------------------------------------------------------------
17  ---------------------------GCGTCCCTCCCAGACACGGCAGCCTAACACGGCGATAATCGAATTGACAAGGG

  
0  AAGTGCCTATCCGAAATTGAAATGGATTGCAAGATGATCTGTCAGACTCAATCCATATACGAACCATATCGTGTTATAAA
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  AATTTTATTTTTTTAAAAATTATAAGGTTATTTAGTTATCTTTAATATAATTAAATTTGTATTATTATGTTGAAAATAAA
5  ATGACTTAATTATAAATCTTAATGTTTTAATTTTTAGCCTTTAATTATGTAACTACATAGTTAGCTGAAAGTTTTATAAT
6  -------------------------------------------------------------------------------C
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------
16  -----------------------------AAAATATAAGACTTAAAAAAATTTATTTATAATACACAAAGAAGATGACTA
17  AAGTGCCTATCCGGTAGCATCCGGCGCCATGAGGGGCACAGGAACCCATCTCATTGCAAAGAACCGCAAGGCTTTTTTCA

  
0  ATCTTCCATGTTTATATAAAATTAAATAATTCTGGTGTA_____TTCTTGATAGATTAATAA__AAAAATTA__TAA___
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  ATTGTC-ATGTTTATTTAAAATCAAATAAATATT-TATT-----TGCATCAATGTTTGTTTT--CATACTTA--TAAGAG
5  AATT---ATGTT-ATAAAAAATTGAC--ATTATG-TGAA-----ATGT-GATAGATTTTTCTCTATATGTTA--AAA---
6  TTTTAGTATTTAAAAATTAATATAAGTAAATGGAGGGGAAACCCTCCTTATTATTTTGCAAT--AAAATTTACCTTA---
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  -------------------------------------------------------------T--ATCTCTGG--TAA---
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------
16  AAGTAAATATTTAGTCGTTTTTTAATTGCTAATTATCAT-----AAAATGTTACATTTTTAT--ATAAAATA--TAA---
17  ATTACCAT------------------------------------------------------------------------

  
0  AAACTTTTAA_CATTT_GCA_AT______TCCTTT_TGTACCAATAATGA_AAGC__GTATACAATATAGATTGATTAAT
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  AATATTTTAA-TTAGA-GAG-AT------TGTAAA-AGA-----------------------------------------
5  AAAGGTCTATGCATTTTGCATAG------ACCTTT-T----CAATATGGA-AAACAGGTATTTGTAATAGAAGGAG----
6  TAACTTTTA----TTT-GTA-ATAATAGATACTTTATGTAT-AATAGTTATAGGA--CCATACATAGTAAGAGGATTAGT
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  CTGGAGATAA-TTTTT-AGC-AT------AAGGGC-ATAACTGCTAATGT-GATC--GTAATCAC---AGTGTGAT--AT
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------
16  CT--TTTTTG-CGATT-AAA-AT------TTCTTT-TGAACTAATAAAC---------TTTACAATTTA---TTAATAAA
17  --------------------------------------------------------------------------------

  
0  CAAAATTGTCTAATAATTTTAAAAAATGCTGTTGACACTGCGTCCAAAGCGGCGTAATATGAGTTCAACAAAAGATAAAT
1  --------------------------------------------------------------------------------
2  ----------------------------------------------------TTGCTTTTGTGATATTTACATTTTAGCA
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  CAAAATTA------------------------------------------------------------------------
6  GGATAATATC--ATAGTTATATAAAATTTAATAATTTTGGAGGTACTT--------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------AATTAAATAACCTCCTTGTATTATTCGTGA
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  TCGTATTGTCAAATAATTTTAAAAAGCAGAAGCGTGATTACTCTCACACAACACCTCTGCTTTCCATGTTATTTATTATT
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------
16  GAAAGGTTTTTAGTATTTTTAATA--------------------------------------------------------
17  --------------------------------------------------------------------------------

  
0  GCAAGCTTCACAAGCGAAAATCATCGCAGTATGATTCTAAAAAAATGAAAAACAAACGACCTTCTTGAACAGCTGGAAAG
1  ------------------------------------------CCTTGCATGCTTAGTATGTTTTTTCTATAATGGTTTTA
2  TGTCTAATATTAATAAATAAATAGAAGTAAGTTTCCAATTTGAGAAATATGTATATACTATGATTATATTTCGATGGTTT
3  -----------ATTCATGTATAGACCTCCTAAATTCTCTAAACTATTATAGCATATGACATATTTTTTAGGAGCGTAGAT
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  GCACCTTTTTGTGCTCTAACGTATACTATGTATAAATAAGCTTGTTTCGTGTCTATACTAAATAACAGTTGACGCTATCA
9  --------------------------------------------------------------------------------
10  ---------AATGATACCTCCTAGTCCATATTATAGATGGAACTATTTGATTTGACTAAAAATCAGATTGAAACACAATT
11  TCAATTACTAGAGACCTGAGAAAAGTAATCCACCTGAAAGGGCGGCTTACTTTTCTCTTTTTTTTGTCTATTACAAATGG
12  -----------------------------------------CAGCCGTCAGTTTAGTGATTACAATGAATTATAAATTAA
13  ---------------------------------------------------------------TACGGGGTTGACGTGCA
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------
16  --------------------------------------------------------------------------------
17  --------------------------------------------------------------------------------

  
0  CCGTTCCGAAGGCTGAATATGAAAAGCGCAGATGAGGATAAGTAGCCTTGATAAAG_TTTTCCACA____GAGAACCGGG
1  TTACTATAAATCAATACAAGCAATGAAGGAGCTAGCAAGACTCATTTTTGATCAAT-TTAGGGAAG----GAATGTCCTG
2  CTTGACATCGAAAAGTATTTTCATTATAATTCCATTAAATCAATTAACGACTATGA-TAAGGACTA----GTAGTGTGTA
3  TATAAAATAGTTGCATTCACATTCTCAATATGCTATGAATAGTATCATACAATAAA-CTTAAATAC----GAAGAAGGAT
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------AAACGATTATTAGAGACAAGTAAGTTTTTT-AGATAAAGG----ATACAAAGCG
8  AAACTTCAAGATAAAATAAAAATACAAATAAGCAAAATAAATGCGAAGATAGGAAG-TAGTAAAGA----ATTAACACTT
9  --------------------------------------------------------------------------------
10  TAGTTGTTGACATTTAAGGAGAAACTGATAATAATATATAACAATACAGTTGAACG-TTTAACAGA----GGAATAGTAT
11  GAATACGAT-----------------------------------------------------------------------
12  ACGACTAATCAAATTTTAATAAACGGTTGTGATTAGAACAAGTA------ATTAAG-TCTTCCTCATCCAGAGAGCCCGG
13  GGGCACTTTGCCATAAACTGACAATGTAGATAAAAGCCTTGACGAGAAATAGTAGT-TAGTTACGG----CGTCGTAGGG
14  --------------------------AAACGATTATAAGAGACAAGTAAATTTTTT-AGATATAGG----ATACAAAGCG
15  --------------ATACTTTTAACACGTTGAAGAGGATCAGTAA--TTAAAGGCGATCATCTACA----GAGAGCTGCT
16  --------------------------------------------------------------------------------
17  --------------------------------------------------------------------------------

  
0  TT_AGCTGAGAACCGGCGA___AG___CTTTACAAGGTGAA_CTCGCCTCAGAG_TGCCAGTCTGAA__A___TG____A
1  AC-TGAAAGCATTCCTATT---GA---TGAAGAGAATTGCA-TTTCACTCTGGA-GCTAACACTTGG--A---CC----A
2  AC-TCATCAAAAAAAGAGA---GA---CAGTGGTTGGTGAA-AACTGTTGATGA-TGTACATATGAA--C---TC----A
3  CG-AAGTAGCTATGCAAAT---CA---CTATTTTAAGAGAA-CTGACGGGTGGT-GCAAGTCAGTAT--A---TA----T
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  AG-TTGGTGCATGGTGCGA---GA---CCAGCTATCCTCTA-GAAAATCGAAAT-CACTCTTTAGTT--C---TA----A
8  TT-AGAGAGGGAAATCTTG---AG---CTGGAAATTTCCTA-AGTATGTTAATC-TTGAAGTCGTCC--T---TG----A
9  --------------------------------------------------------------------------------
10  GT-AGATATCGAATGAAAG---AG---ATCGGAATTTATTA-GCTGAGAGATTC-CGTCATTGCTGA--T---TT----A
11  --------------------------------------------------------------------------------
12  GT-AGCTGAGAACCGGACAGACAG---GCTTA--ACGAACA-CACATCTATGAACTGCTAAGGTGAA--CCAGTC----T
13  AC-GGGTGTCACCGATTGA---AA---GCACCCTGGCGACC-AAGATTGACGAA-TTCACTCTCTGA--G---CT----G
14  AG-TTGGTGCAAGGTGTGA---GA---CCAGCTATCCTCTA-AAAAATCGAAAT-CACTCTTTAGTT--C---TA----A
15  AGGAGCTGAGAGGCAGCGA---TGATCCTTTAA----TGAAGCTCACCTCGGAG-TGCGACTTCGAACAA---TCGGGCA
16  --------------------------------------------------------------------------------
17  --------------------------------------------------------------------------------

  
0  CAG_______TAG__GACTTGGCCGG_GTGAACTTGA__TTCACT_____CGTTACTAAA____GCGGA_TAGAAATATC
1  TAG-------ATG--AATGTAAAGGT-GTTTCGGAAC--CCATCC-----GTTATCAGGA----CAAAG-TTGGATTATT
2  CCT-------T-G--GATGTTGCTGTAGTGAACTTAA--GTAACTATTGCCGTTTCATCA----ACGT--TATCGATGTC
3  TTG-------CTG--GTGAATTACAA-TCTGGAGTAA--TTCTCTT----CATTTAGAGA----TCGG--TGGAAACATC
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  CCC-------GAA--AGAGCAACCGC-TTGAGTAAGT--GTTAGC-----GCGAGCCAGC----GTTAT-GGCATTAATG
8  TGC-------AGT--TTCTCTGAATA-ATTAGTAAGA--GAGATC-----GGTGTATTGA----CCGTT-ATCCAAACAT
9  --------------------------------------------------------------------------AGTAAT
10  TCA-------GAA--CCTACCTTTGG-AGTCCCATGT--AAACAT-----GGGCGTTTAG----CCAGC-GTTAATGGTA
11  --------------------------------------------------------------------------------
12  CAT-------TAG--C-CTTAGCCG------AATTGG--TT---T-----CGTTATCCAA----GTTGACTTGATCAA--
13  AAA-------TTG--GGCGTTTGTGT-AAACAAATAA--TTTTCC-----GGTATCCCGA----CCGTT-ATGACGGGTA
14  CCC-------GAA--AAAGCAACTGC-TTGAGTAAGT--GTTAGC-----GCGAGCCGGC----GTTAT-GGCATTAATG
15  CAGCCTGCTTTAGTAGATGTTGCCGG-GTGGTTTTTCACTACACC-----CGTTATCAAAATGAGACGA-TTTGATCGTC
16  --------------------------------------------------------------------------------
17  --------------------------------------------------------------------------------

  
0  CATGAGA_CGGCCGATT__AACAGG____CC_GTAAACAAGGGTGGTACCGCGG_AAAGAAAAGCCTTTTCGCCCCTTTT
1  AATATAA-TGTAAAATA--CATGTA----TA-ATCAACAAGGGTGGTACCGCGA-CCATAGA-GCCT---CGTCCCTTTC
2  AA-GTGA-GTGTC--TT--CATAGA----CG-CTAATTT-GGGTGGTACCGCGGGAAATAAAAGC-TTCTCGTCCCTGTT
3  GTTAACA-ATTCCAAGT--GGCTGGTAATCC-AGCAACAAGGGTGGTACCGCG---AATACAACTCGTCCCTTCCATTTT
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  AAGTGGG-CAAGCAGTT--AAAATG----CATGTCAACAAGGGTGGTACCGCGA-ATCTCGTCCCTTTTTTGGGAGAGAT
8  GAGTGTA-CAAACAATT--CTTTGT----TT-GTAAACAAAGGTGGTACCACGG-AAATTATACCCTTTTCGTCCTTTTT
9  TGCACCT-CACGATTCT--TTGGTA----AT-ATTATACCACAGTAAGGAGAGT-ATAGCAAACTTATGTTCTCATACCG
10  GAAGTGA-GATGCAAAT--CATTGC----AT-CTAAGATGTGGTGGTACCGCGG-AA-GAAAACTCTTT-CGTCCCTTTT
11  --------------------------------------------------------------------------------
12  CATGAGGTCTGCCGTGCG-AACGGT----AG-ATGAAATAAGGTGGAACCACGC-GTA-AACGTCCTTTTAGCAAATTGC
13  GTGAGTG-TGCATAGTG--ACTACT----AT-GCAAACAAGGGTGGTACCGCGA-TGACCTCGTCCCTTTTCAGGGATGG
14  AAGTGGG-CAAGCAATT--AACATG----CATGTCAACAAGGGTGGTACCGCGA-ATCTCGTCCCTTTTTTGGGAGAGAT
15  CATGAGG-TAGCATTTGTAAAAATG----CT-ACGAATGAGGGTGGTACCGTGA-AAAGAGAAATCTTTTTGCCCCTTT-
16  --------------------------------------------------------------------------------
17  --------------------------------------------------------------------------------

  
0  AGCTATCGCAGTTACTGCGCGGCTGATTGTGGGCGGAAGGGCTTTTTTTATTGAATAATCAGCTATCTAGCTAATGAAAA
1  TGGGATAGAGGCTTTTTTGTTTTTCGTATTGATAAATATTAGGGAGGTATAAAGA-------------------------
2  TATGAGGGATGAGTGGCTTTTTTTAGTTTACTCAAAAAATTAAAGTGTAAGCAGTTTTACTATGAAAGGAAGGGTTGAC-
3  AGGAGGAGACGAGTTTTTTATTTGAAAAATATAAATTTTGGAGTGAGATTAC----------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  TTTTTTGTGTTTAAAAATAAAGTTTTAAAGGAGAAGAAAAC---------------------------------------
8  TTAAGGATGAAAAGGGTTTTTTGCTTTAATATAAGGAGGTTTATAA----------------------------------
9  TAACTTTCATAAAAACACTTAAAATAAGGTGATTTTTGTATTATTTTTTAT-GAAAAAACAACTTTTTATTTGATAAAAA
10  ATTGAATGGGGATGAAGGGGTTTTTTTATGTTCCAGGATATTATTAAATTTTGAAGCTGTGGAAAAAACGTACTAAGTTA
11  --------------------------------------------------------------------------------
12  TAAGGGGGCGTTTTTTAGTTTCACCGATCCATGCGGTAAGTTTGCGTGACGGAATCGCAAGTCGATCCGGTTAGCATGTA
13  GGTCTTTTTTTGTCCGCAACGCAACTAAAAATTGGAGGCAGCAT------------------------------------
14  TTTTTTGTGTTTAAAAATAAAGTTTTAAAGGAGAAGAGAGT---------------------------------------
15  -GCTA--GAAATT-CTG-GCAGC-----GTGGGTAAAAAGA-TTTTTTTATTATTCCATTGTTGTTGGAGAGAGACAATC
16  --------------------------------------------------------------------------------
17  --------------------------------------------------------------------------------

  
0  _GATGATCTTTAA_AGGATGAAAATCCAAAAGGAGGAACTAAA_____________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  AGAGTATATTTGTTATAATGAAAAGATGATTTTTAAGTAAGAGGTGACTTT-----------------------------
10  -TAAAGTTATTTA-GCCCGGTCCAGGACATGCGGTGATAAACGGGCGTTTGGGCTTTTGTTCTTATACCTGAAAATAGAC
11  --------------------------------------------------------------------------------
12  -AGCAATTGATTA-AGCACGTTGATAAGTAACGATATGAATTAAACTGATTAGTTTTAAAAATAACGACGTTTTAGGAGG
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------
15  -AAAGAATTAAAG-GAGGAGCAAGG-------------------------------------------------------
16  --------------------------------------------------------------------------------
17  --------------------------------------------------------------------------------

  
0  _____________________________
1  -----------------------------
2  -----------------------------
3  -----------------------------
4  -----------------------------
5  -----------------------------
6  -----------------------------
7  -----------------------------
8  -----------------------------
9  -----------------------------
10  ACTTAGAGAATATTGAGGAGGAGAAGAAT
11  -----------------------------
12  CGTAAATT---------------------
13  -----------------------------
14  -----------------------------
15  -----------------------------
16  -----------------------------
17  -----------------------------

Complementary Intergenic Regions

IGR  +  2896072  2896886  ()  11  ysnD