BLISSBreaker Lab Intergenic Sequence ServerHome

Intergenic view options: Interleaved

NC_000964.1 Bacillus subtilis (- 2729496 to 2729828) circular

Islands  AC...C.G....GCGAA....AACAA....CG..CGCGG,,,,,GGCAA.AGGGCACCGC,,,..CAA....CGG.GAGA
5'-   ACTTTCTGTTTTGCGAATTTTAACAATTTTCGTTCGCGGAAAAAGGCAATAGGGCACCGCAAATTCAATTTTCGGTGAGA
          |         |         |         |         |         |         |         | 
          2729820   2729810   2729800   2729790   2729780   2729770   2729760   27
          |         |         |         |         |         |         |         | 
3'-   TGAAAGACAAAACGCTTAAAATTGTTAAAAGCAAGCGCCTTTTTCCGTTATCCCGTGGCGTTTAAGTTAAAAGCCACTCT
Islands  .G,,,GAC,,,,CGC..,,,,..G..,,,,GCAAGCGCC.....CCG..A.CCCG.GGCG...AAG..,,,,GCCAC.C.

  
Islands  CCGCAA.AAC.....GGC..C.GA.AAG...C..A.GA.G..GG.A.CAAG.CACACAAG.ACA.AAC.C.CCCA.GAC.
5'-   CCGCAATAACTTTTTGGCTTCTGATAAGTTTCTTATGATGTTGGTATCAAGTCACACAAGTACATAACTCTCCCATGACT
          |         |         |         |         |         |         |         | 
  29750   2729740   2729730   2729720   2729710   2729700   2729690   2729680   27
          |         |         |         |         |         |         |         | 
3'-   GGCGTTATTGAAAAACCGAAGACTATTCAAAGAATACTACAACCATAGTTCAGTGTGTTCATGTATTGAGAGGGTACTGA
Islands  GGCG..A..G,,,,,CCGAAGAC.A..C,,,GAA.AC.ACAACCA.AG..CAG.G.G..CA.G.A..GAGAGGG.AC.GA

  
Islands  .C...C.GA.G.AAG..AA...CA..A.GAG..AA.CGCGAGGA.AA....A..C.G.GAA.AA.AC...,,,,GGA...
5'-   TCTTTCTGATGTAAGTTAATTTCATTATGAGTTAATCGCGAGGATAATTTTATTCTGTGAATAATACTTTAAAAGGATTT
          |         |         |         |         |         |         |         | 
  29670   2729660   2729650   2729640   2729630   2729620   2729610   2729600   27
          |         |         |         |         |         |         |         | 
3'-   AGAAAGACTACATTCAATTAAAGTAATACTCAATTAGCGCTCCTATTAAAATAAGACACTTATTATGAAATTTTCCTAAA
Islands  AG,,,GAC.ACA..CAA..,,,G.AA.AC.CAA..AGCGC.CC.A..,,,,.AAGACAC..A..A.G,,,....CC.,,,

  
Islands  ,,,...,,,.AA.A...GA..AACGAA.,,,,,..CG..A..A...,,,..G.A.G,,,.A.AA..C.G..AAG..G.A.
5'-   AAATTTAAATAATATTTGATTAACGAATAAAAATTCGTTATTATTTAAATTGTATGAAATATAATTCTGTTAAGTTGTAT
          |         |         |         |         |         |         |         | 
  29590   2729580   2729570   2729560   2729550   2729540   2729530   2729520   27
          |         |         |         |         |         |         |         | 
3'-   TTTAAATTTATTATAAACTAATTGCTTATTTTTAAGCAATAATAAATTTAACATACTTTATATTAAGACAATTCAACATA
Islands  ...,,,...A..A.,,,C.AA..GC..A.....AAGCAA.AA.,,,...AACA.AC...A.A..AAGACAA..CAACA.A

  
Islands  .GGGGG..G.GAA
5'-   TGGGGGTTGTGAA
          |    
  29510   2729500   
          |    
3'-   ACCCCCAACACTT
Islands  ACCCCCAACAC..

IGR  -   2729496  2729828  ()  16  azlB azlC azlD

Blast Hits

ID Organism Class Accession Start End Operon
0 Bacillus subtilis B/C NC_000964.1 - 2729496 2729828 azlB azlC azlD [COG1522 COG1296 COG1687]
1 Clostridium tetani E88 B/C NC_004557.1 + 996512 996724 CTC00936 [COG1882]
2 Wigglesworthia brevipalpis P-g NC_004344.1 - 684144 684379 Wbr0643 [COG0796]
3 Ralstonia solanacearum P-b NC_003295.1 - 3485365 3485834 RSc3222 [COG3501]
4 Rickettsia conorii Malish 7 P-a NC_003103.1 + 543315 543463 RC0551 [-]
5 Clostridium acetobutylicum ATCC824 B/C NC_003030.1 + 1854884 1854981 CAC1706 CAC1707 CAC1708 [COG0573 COG0581 COG1117]
6 Ureaplasma urealyticum B/C NC_002162.1 - 79773 79939 UU063 [-]
7 Ureaplasma urealyticum B/C NC_002162.1 - 15755 15809 mglA rbsC-1 rbsC-2 [COG3845 COG4603 COG1079]
8 Staphylococcus aureus subsp. aureus N315 B/C NC_002745.1 - 2582415 2582890 SA2299 [COG1289]
9 Thermoplasma volcanium A NC_002689.2 - 910004 910395 TVN0875 [COG0656]
10 Oceanobacillus iheyensis B/C NC_004193.1 - 1985958 1986235 OB1957 OB1956 OB1955 [- - COG1702]
11 Leptospira interrogans serovar lai str. 56601 chromosome I Sp NC_004342.1 + 1296692 1296779 LA1306 [-]
12 Borrelia burgdorferi plasmid lp21 Sp NC_000955.1 + 16549 16602 BBU10 [-]
13 Bacillus subtilis B/C NC_000964.1 - 3662158 3662340 lytA lytB [- COG2247|COG2385]
14 Bacillus subtilis B/C NC_000964.1 - 2658040 2658482 yqcI [COG3403]
15 Archaeoglobus fulgidus A NC_000917.1 + 1507779 1507886 AF1679 [-]

0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  TCCCTTCAGACCCGCGCCAGCACTGTGTTTGCGCGGGTCTTGTGCTTTTGACCTGCCCCGCTGAGGTTCGCACCCCACAG
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  TTTAAACAAGCAGTAAGCTTTCACAT------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  GATATTCACCCTTCCCTTAAC-----------------------------------------------------------
15  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  GTTCGCACCCCACTCAGGTCAGGTTCGCACCAATCAGCCGTGGACCGTTGATGGTCCGCCCCGGCTCTGCTTGCTTTGTT
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  ATCAAATCTTAATTTGCGCCAAGCAAGGCCATGCGCTGCCCGATGCCGGGTCAAAAAGGCACGAAAGTGCCCTTGTGCGC
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  GTTTTCCCCAATATGTAAGCTGCGCAGCCATAAAAGGGGAGTAATTATTAAATGGGTGCGCCAGCCCCATGGTCAGGCCA
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------

  
0  ______________________ACTTTCTGTTTTGCGAATTTTAACAA_TTTTCGTTCGCGGAAAAAGGCAATAGGGCAC
1  -------------------------------------------------------------------------------T
2  --------------------------------------------------------------------------------
3  TTTTTACGCGAACTGAATATCTGAATTCTGTTTTGCGAATATTAACCC-GGTCTTTTCACTGCTTCCCTCTGAATCCATG
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  ----------------------TGTTGGGGCTTATTGCTTTTTTACGT-TGAAATTGAAACTTTTTAAAACAGATATGGT
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  ----------------------TCTACTAGTACTGTAAATATTAACAAGTTTTCGTTCGCAGAAAAAGGAAATAGGGCAC
15  --------------------------------------------------------------------------------

  
0  CGCAAATTCAATTTTCGGTGAGACCGCAATAACTTTTTGGCTTCTGATAAGTTTCTTATGATGTTGGTATCAAGTCACAC
1  TATAGAATAAAATATTACTATAAAGTAGAAGAAAAGATGAATTATGAAGTGAATTTTGAATAAATATTTATAGAGATTAA
2  --------------------------------------------------------------ACTTTTTATTTATAGAAA
3  TATGCAGCCGCGCCTATCCTGACCGCGGCTGTTTCCGTTTGTTTACCAGTCTTCCGAAAGGTGAATCCGAC---------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  ---------------------------------------------------------------TCAAATTAATTAAAATC
7  --------------------------------------------------------------------------------
8  TTAAGATGAACGGGAAGTTATTAAAATGATATATGTAAAGAAATAAAGTTTTAAAACATTAGTCAGGTAACGCTTGTAAA
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  CGCAATTTAAATTTTCGGTGAGACCGCAATAACTTTTTG-CTTTAGAGAGTTATGAAATTCCCTCCTGGGAGTACCATGA
15  --------------------------------------------------------------------------------

  
0  AAGTACATAACTCTCCCATGACTTCTTTCTGATGTAAGTTAATTTCATTATGAGTTAA_TC__GCGAGGAT__AATTTTA
1  ATAAATAAGTGTTAAAGAAAATAATAGCTTGATGGTACT--ATATAAGTATGGTATTA-TCAAGCTATTTT--AATTTTA
2  AACTTGCCGAAGGCCGGAATTGAACCGGCAAGTCTTTAGACGATTGATTTTGAGTCAA-TT--GCGTTTACCAAATTTCG
3  --------------------------------------------------------------------------------
4  ----------------------------------------AAATAATGTTTTTGACGA-TA--ATATAGCA--GATCAAA
5  --------------------------------------------TTAAGATACATAAT-TG--TACCACAA--TATTAAA
6  TATTTTTCGTTTTTCATAAAAAAAGATTGAGTAGTTAACACAGTCAATCTTTTTTTAT-TT--TTAACTTT--TGGATTC
7  --------------------------------------------------------------------------------
8  AGTACATATAAATTTTAACTAGCCCAAAGGTGGGCGACCAAAGGTTCAACGATGTTAA-AT--AACATTAG--AAATTAA
9  ---------------------AAATAATAAAAAAATTTATTATTTTATAAAAGATAAA-CA--TTTAATGG--AAGGAAT
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  ----------------CCTTTGCACCTCGTCTGTTAAATTACTTTCATTATGAGTTAAATT--TCCAATA---AATACAA
14  CTTGGCATCAAAAAACAGGGAATTTCGGTCATTCTTGTGATAGTTTAAAATTGAAAAC-AT--CCAGAAAG--TCCAGCG
15  ---------------GTTTTTAAGTAGCCAGCACCTGTTTTAATTCTTTCTGATTTT--TG--ATGATGAT--AAT----

  
0  ____TTC__TGTGAATAATA_CTT_TAAAAGGATT__TAAAT__T____TAAATAATATT_TGATTAACGAATAAAAATT
1  ----TTAATTGTGATTAATT-CTT-AAAAAGGATT---AAAT--T----ATTATAAAAAT-AGGGGGATAATT-------
2  CCACTTC--GGCTTTTGATT-GTT--AAAATTTTT--TAAAT--T----TGTATAATA-----ATAAACTTA-AATGATA
3  --------------------------------------------------------------------------------
4  ----GGT--CCGAAATCTTA--TT-TAAAATGATAA-TATAG--TACAATAAATAATATT-TGATTATTAGTTTTTTATT
5  ----AAC--AGTATTATGGT-GCA-ATTATCATTT--TAAAT--T----TAAATAATATA-AAAACTTAAATTGAGGTAA
6  ----CAA--AAATAAAAAAA-CTAATAAAAGCA------AAT--T----TAAATAATGTTATGATTAACACATTAAATTT
7  ------------------TA-CTT-TAAAAGTATC--TAATT--T----GAAATAA-ATA-TAAAAAATTA-TAGAAAGT
8  ----TTT--T---AATTGGA-CTT-TAAAAGTTTT--TAAAT--T----TAGATAAT-TG-AGCATAAGGTGTTATAATC
9  ----TTC--TAT-AATTATATCTG-TAAAAGACACACTAAAT--T----TAAATAATATT-T---TAAATTATACTGATT
10  --------------------------------------------A----TAAATAATATT-TGATTAATG--TAAATCCC
11  --------------------------AAATGGATT--TGAAT--T----TGAATAATATT-CGATTTTGCTTTACAAGGT
12  -----------------------------TTAATT--TAAAT--T----TAATTAATATT-ATAT-AACAAATTGTCTCC
13  ----CTC--TATT--TAATA-C-------AAGAAT--GAAATCCT----AAAATAGTCGT-TTTTTATAAAAAAAAGTTT
14  ----TTA--GTCGTTTTGAG-GGG-CTGAGTGTGC--ATGTA--C----AGCTAAACGCA-GAACTGATTCTGGATTTTT
15  ----------GGAAATAATC-ATT-TTAAACA--T--AAAAT--T----TATATAATAAT-TGATTAACTTTTGCT----

  
0  _CGTTAT______TAT____TTAAATTGTAT__GAAATATAATTC_TGTTAAGTTGTATTGGGGGTTGTGAA________
1  --------------------------------------------------------------------------------
2  -TATTAT------TAT----TTAATTTTAAT--CAA-TAAAACTG-T-TTCAGTGTTAAAAGTTTTCTTTAAAAGTATTT
3  --------------------------------------------------------------------------------
4  -AAGTAT------C-T----TTAAATATTTT----AATATAAATT-TAATAAATAAGGTATCAT----------------
5  -AGCT---------------------------------------------------------------------------
6  ---TTAG------GAG----T-AAATTC----------------------------------------------------
7  -GATCAT-------------------------------------------------------------------------
8  -ACATATGTTGCGTAA----TTAAAATTTATA-GCAACA-AATTCATTTTAACTATGCTAATAAAAAGATTATGGAAATA
9  GCG-----------AT----TTA-----TAT--GAAATAATAT-C-TGTTAGTAATAATAACAATTCAAATAAAAAGCAT
10  -GATTAT------CCT----TACGGTTAATC--GGGATTT--TTG-TGTTAGATATTATTTCATCCATATCTAACAGACC
11  -TTTAAA------TTTAGTGTTCAGTTGAAT--AAAAAGGAAATT-CGCAGTC---------------------------
12  -ATTTAT------TAT----GTAG--------------------------------------------------------
13  -CATTGT------TTC----TTAATTTTTCTTTAAAATATAAAAT-AGGTTGACGATAAAATATAATGAGGTGAAAAAA-
14  -CTTGAT------AAG----GAAATTACTTA--CCTACCCACTAA-AACTTAACCAATTAATTAATTAATATTCATTTGG
15  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  AATTTAAATTAATATT----------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  TTTTGACAAGGAAAGGAGAAGTCGAAATGACATCTTTTTGACATCACTTATAAAAATCAATCGACTTAACTTAGACTTTT
9  GAGACAAGGAAATATATATACGAATAACGTAAAATATGATTTTTATTGCTTTCGGATGTATTAGAAACAAATATGTTAGA
10  ATGATAGAAAGTGAACTGGATTAAATAAACTAAAGATTGGTTGGACTGTGCGATTCTCTTCAATTGTCATATAGTATCCT
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  ATATATGGAAAAGTAATTAGACATTCACCTCCTTCGTGCTCCCGCAATACATTATGATAAATGCCTTCGGAGGTGGATTT
15  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  ATAAAGGTGTAAGACAGGGACTGTTA------------------------------------------------------
9  CCCCGGTGAGTGAATTTTATTGATAAAGCTGAAATATATGGCACAGAGCCAATAATAGGGAAGCAATAAGAGATTATAAA
10  TACCCATTGTATATGAATTTTTGTATGTTAATTAGGTTTAGTCAACGGTTCTTGTTCTTATTGATGAAGTTTTTTCATAC
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  A-------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------

  
0  ____________________________________________________________
1  ------------------------------------------------------------
2  ------------------------------------------------------------
3  ------------------------------------------------------------
4  ------------------------------------------------------------
5  ------------------------------------------------------------
6  ------------------------------------------------------------
7  ------------------------------------------------------------
8  ------------------------------------------------------------
9  AGGGATGATCTTTTTATAGCAGGCAAGGTATGGGCAAACCATTTCCGCTACGATGATTTG
10  ATATCTATGTGAGGGGGGATCATCA-----------------------------------
11  ------------------------------------------------------------
12  ------------------------------------------------------------
13  ------------------------------------------------------------
14  ------------------------------------------------------------
15  ------------------------------------------------------------