BLISSBreaker Lab Intergenic Sequence ServerHome

Intergenic view options: Interleaved

NC_000964.1 Bacillus subtilis (- 2663679 to 2663842) circular

Islands  A.,,,.AG.C.CC..GAG.A.C...C.CAAGGAGA.AC..A.G...A....G..ACAGA.AG..C,,,,..A..C.AA.A
5'-   ATAAATAGTCTCCTTGAGTATCTTTCTCAAGGAGATACTTATGTTTATTTTGTTACAGATAGTTCAAAATTATTCTAATA
    |         |         |         |         |         |         |         |       
    2663840   2663830   2663820   2663810   2663800   2663790   2663780   2663770 
    |         |         |         |         |         |         |         |       
3'-   TATTTATCAGAGGAACTCATAGAAAGAGTTCCTCTATGAATACAAATAAAACAATGTCTATCAAGTTTTAATAAGATTAT
Islands  .A...A.CAGAGGAAC.CA.AG,,,GAG..CC.C.A.GAA.AC,,,.,,,,CAA.G.C.A.CAAG....AA.AAGA..A.
Term (91.00)%  ---------GAGGAACTCATAGAAAGAGTTCCTC----------------------------------------------

  
Islands  ...GAG.,,,,,G.A..A.....C.AG.C.GAACA.AA.G..A.CA...ACA.G.,,,.AA...,,,,G,,,GGGA..GA
5'-   TTTGAGTAAAAAGTATTATTTTTCTAGTCTGAACATAATGTTATCATTTACATGTAAATAATTTAAAAGAAAGGGATTGA
    |         |         |         |         |         |         |         |       
    2663760   2663750   2663740   2663730   2663720   2663710   2663700   2663690 
    |         |         |         |         |         |         |         |       
3'-   AAACTCATTTTTCATAATAAAAAGATCAGACTTGTATTACAATAGTAAATGTACATTTATTAAATTTTCTTTCCCTAACT
Islands  ,,,C.CA.....CA.AA.,,,,,GA.CAGAC..G.A..ACAA.AG.,,,.G.ACA...A..,,,....C...CCC.AAC.

  
Islands  ...C
5'-   TTTC
    | 
    2663680   
    | 
3'-   AAAG
Islands  ,,,G

IGR  -   2663679  2663842  ()  15  yqxI yqxJ

Blast Hits

ID Organism Class Accession Start End Operon
0 Bacillus subtilis B/C NC_000964.1 - 2663679 2663842 yqxI yqxJ [- -]
1 Streptococcus mutans UA159 B/C NC_004350.1 - 1281024 1281068 bacA1 SMU.1341c bacA2 [COG1020 COG1020 COG1020]
2 Clostridium tetani E88 B/C NC_004557.1 + 486140 486491 CTC00481 [COG0668]
3 Vibrio vulnificus CMCP6 chromosome II P-g NC_004460.1 + 899426 899650 VV20833 [COG0722]
4 Clostridium perfringens B/C NC_003366.1 + 2855654 2855995 CPE2494 [COG1609]
5 Bacillus halodurans B/C NC_002570.1 + 300716 300897 BH0279 [-]
6 Neisseria meningitidis serogroup B strain MC58 P-b NC_003112.1 - 334361 334698 NMB0323 [COG0654]
7 Clostridium acetobutylicum ATCC824 B/C NC_003030.1 + 3646042 3646256 CAC3451 xynD [COG2211 COG3507]
8 Listeria monocytogenes strain EGD B/C NC_003210.1 - 2583106 2583180 spl [COG3883|COG0791]
9 Listeria innocua Clip11262 B/C NC_003212.1 - 2667572 2667646 spl [COG3883|COG0791]
10 Escherichia coli K12 P-g NC_000913.1 - 3632089 3632371 yhiL yhiK [- -]
11 Clostridium acetobutylicum ATCC824 B/C NC_003030.1 + 1962988 1963080 CAC1813 pgsA [COG0621 COG0558]
12 Chlorobium tepidum TLS Ch NC_002932.3 - 1112393 1112491 CT1182 [COG1846]
13 Rickettsia prowazekii strain Madrid E P-a NC_000963.1 + 440837 440942 RP363 [-]
14 Helicobacter pylori 26695 P-e NC_000915.1 - 1136901 1136957 HP1077 [COG3376]

0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  TTAATATTTTAATGGAAAAGGAATTAGAAAAACATAAAATTATCTGACAAAGTAAAAGTAAATGTGGATAAAATGTATAA
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  CTAAGACACTCCTTCATAAAGCTAAGT-----------------------------------------------------
6  TCCAACCGATACCTGAAGCCGCATCTTTTCACGATGCGGCTTTTTATAGTGGATTAACAAAAATCAGGACAAGGCGACGA
7  CCTACACAAAGCTCATTTATGAATTTTATATACATAAATGAGCTTTAAATAC----------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  AGCATAACTATAGCGGGGTTTACTTTGCAGAGCGCTACTTTTCAGCGTTCAAAAGGCCATGATAAATAAAAATTTATCCT
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  AGAAGAGACAGCCAAGCTATCTCTTCTTTTCTTATTCATTATCTAAAACTGTAAGTTTTTCTTGTCCTATTTTGTAGAAT
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  AGCCGCAGACAGTACAAATAGTACGGCAAGGCGAGGCAACGCCGTACTGGTTTAAATTTAATCCACTATACATACCCCAC
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  AAGATTAATTCTTATGCTGTTGTTTTTTACAATTATCTTCCAGGGAGGGATTATTCTTCATTATTTGGTAAAAGACCGGA
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  TTATAAATATTTTTAAGTTCTATCATGATAATTTCCCATTTTCTTAAATATTGGTACTGTCACCTGCCTTTATAAATAAT
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  ACCCGATTTGATACACATTAAGCTGAAAGTAAAAATCCGCATACA-----------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  TAGTCTCGGTGCTTAAAATCAGCGAACATATAAGTATTATT---------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ___________ATAAATAGTCTCCTTGAGTATCTTTCTCA_AGGAGATACTTATG_TT_TATTTTGTTACAGATAGTTCA
1  --------------------------------------------------------------------------------
2  AAGATATATTATATAATAATGTTCATCATTTTAATGTTAACAAGATATTCTTATG-TGATATTTTGCTAAA--TCGTAAA
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  -----------TTTATTCTACTCTAAACAATTGCACATGT-AGTTGTCAATGTGT-TC-CAATAAAAAACCGATATTCTA
6  -----------CCCTCCCCTGCATATTTCTTCAACAGTGG-GTTTTGATATAATC-GC-CTATCTGTTACAGATAGTTCA
7  -----------TATCATCACAATTCTAAGGATACCTGATT-TATTCTTTTTTATA-GA-CTTAGGAAATTTTATAGTTCA
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  -----------ATTTTATATCGTCGTAAATCTGTTTTTCA-----GACAAGTATCATT-TATTTTGTTACAAACAATTCA
11  --------------------------------------------------------------------------------
12  -----------------------------------------------------------------------TTTGTTGCT
13  -------------------------------------------------------------------TTTAAATAATTTA
14  -------------------------------------------------------------------------TTTAACA

  
0  _AAAT_TATTCTAA____TATTTGAGTAAAAAGTATT______ATT_TTTCTAGTCTG__________AACATA______
1  --------------------------------------------------------------------------------
2  -GGAA-TATTA-AA----TATTTAAAAGAAAGGGATG------ATT-AA-------------------------------
3  --------------------------------------------------------------------------------
4  ---AT-TAATTTAAAGACTATTTTATTAAAAAATAGT------CTT-TTTTTTATTTGCATTCTTATAAAAATA------
5  CAAAT-TATTCTAT----TAATTTACTAAAAAGTAATTGACAAATT-TTTCAACAATT----------TATAGA------
6  -AACG-GCATTCAA----ACCCTTACAAATACCGTCT------GAA-ATCATCGGCAT----------CCGTCT------
7  -AACT-TTTTAAAG----TGCTTT--TTAAAAGT--T------ATT-GAAAAAGTTTG----------TATGCA------
8  -----------------------------------------------------CTCAG----------AAAATT------
9  -------------------------------------------------------CTA----------AGAAAT------
10  -AAAA-TATCACAG----GTTATTT-------------------------------------------------------
11  --------------------------------------------------------------------------------
12  -TCGC-TTGCTCTT----GATCGAAAAAAAAAGTACT------CTTATTTGTATAC-G----------ACGTCA------
13  -AAAG-AATTAAAA----AAAGGAAATAAAAAA-ATT------TTT-GTTGAAGATTT----------ACAATTGTTAGT
14  -AAATATATTACAA----T---TACCAAAAAAGTATT------ATT-TTTCTTAAAAG----------GTGCGC------

  
0  A_TGTTATCATT___TA_CA_TGTAAATAATTTAAAA____GAAAGGGATTGATTTC_______________________
1  T-ATTACTAGTG---GT-TA-TATTGATGATTTAAAA----GAAAGGGATTAAAA-------------------------
2  --------------------------------------------------------------------------------
3  -----TATCATT---TA-CA-TGTAAAGTAATTAAAA----TGCCAAACAACGAGGCTTGTAGTGAAAGAATGTCAGTTC
4  A-TGTTATCATT---TA-CA-TGTAGTGATTCTCTCT----TTGTACATTTGTGTGTAAGCGATAACACACAAATTTGAA
5  A-T----TAATT---TG-CA-CCCAAAAATCGGAAAA----TTAA-----------------------------------
6  A-TGCAAAGGAT---AT-TT-T----------------------------------------------------------
7  A-TGATATAATT---TAACA-TGTAAATAATTACAAAACACTAGAGGGGTTGATT-------------------------
8  A-CTTGA--ATC---GA-AA-TAAAAATAATTTAAAA----GAAAAAGCTAGGGAGCTTTTTAGGAGGTAAACTTT----
9  T-ACTTAAC-TT---GA-AA-TAAAAATAATTTAAAA----GAAAAAGCTTAGGGAGCTTTTTAGGAGGTAAACTTT---
10  --------------------------------------------------------------------------------
11  --------AATT---TA-CA-T-TAAATAATTTAAAA----ATCCTTGTTAAATTGTTTGTAAAGTAATAAAATATAATT
12  AGTCTCCTTAGT---AA-CCGTTGAAATAATTTAAAA----GAAAGA---------------------------------
13  A-TGTAGTGATTCACTA-CA-TGAACTTAATCAAAAA----ATA------------------------------------
14  T-------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  ATCTTGTTGATTTTACTGGTTAGCATAGGGTGACTTGAGCAAGATTTCGGCTTGACATATCGATTCCTCTTTCTTAATAA
4  TTGAATTTCTTTATTGGGAAATATTTGTTTAATTATTTTCCTAGTTAATCTATAATAATGTACAAGGGGGTGAATGAAAT
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  TGTATTTAACGTGTCACTAGGAGGAAAAACT-------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  TTCCGACATTAACGATAATAATTATCATTAACATTATTTATTTTTACAACTCAGTTACCGATATGGCTCAGGGGGAAAC-
4  GTCTGTAACAATAAATAATATTGCAAAAGAAGCGGGAGTTTCTTTAGCTACAGTTTCTAGAGTTATAAATAATTCTGGAT
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  _________________________________________________
1  -------------------------------------------------
2  -------------------------------------------------
3  -------------------------------------------------
4  ATGTTAAAGATGAAACTCGTGAATTAAAGATGAAACTCGTGAAAAGGTT
5  -------------------------------------------------
6  -------------------------------------------------
7  -------------------------------------------------
8  -------------------------------------------------
9  -------------------------------------------------
10  -------------------------------------------------
11  -------------------------------------------------
12  -------------------------------------------------
13  -------------------------------------------------
14  -------------------------------------------------