BLISSBreaker Lab Intergenic Sequence ServerHome

Intergenic view options: Interleaved

NC_000964.1 Bacillus subtilis (- 2319267 to 2319596) circular

Term (41.35)%  --------CTGGCGGCGCGGTCGTCAG-----------------------------------------------------
Islands  .C,,,,GCC.GGCGGCGCGG.CG.CAGAC.C....A.A.CGAA.CCCC..G,,,.ACGAA.GA.A.C.,,,,,,,C,,,,
5'-   TCAAAAGCCTGGCGGCGCGGTCGTCAGACTCTTTTATATCGAATCCCCTTGAAATACGAATGATATCTAAAAAAACAAAA
        |         |         |         |         |         |         |         |   
        2319590   2319580   2319570   2319560   2319550   2319540   2319530   2319
        |         |         |         |         |         |         |         |   
3'-   AGTTTTCGGACCGCCGCGCCAGCAGTCTGAGAAAATATAGCTTAGGGGAACTTTATGCTTACTATAGATTTTTTTGTTTT
Islands  AG....CGGACCGCCGCGCCAGCAG.C.GAG,,,,.A.AGC..AGGGGAAC...A.GC..AC.A.AGA.......G....

  
Islands  ..,,,G..CGGGAA.....A....CAGCC.A.GCAAGAGA..AGAA.C..GA.A.AA...A..ACAA.A.AA.AGGAACA
5'-   TTAAAGTTCGGGAATTTTTATTTTCAGCCTATGCAAGAGATTAGAATCTTGATATAATTTATTACAATATAATAGGAACA
        |         |         |         |         |         |         |         |   
  520   2319510   2319500   2319490   2319480   2319470   2319460   2319450   2319
        |         |         |         |         |         |         |         |   
3'-   AATTTCAAGCCCTTAAAAATAAAAGTCGGATACGTTCTCTAATCTTAGAACTATATTAAATAATGTTATATTATCCTTGT
Islands  AA...CAAGCCC..,,,,,.,,,,G.CGGA.ACG..C.C.AA.C..AGAAC.A.A..,,,.AA.G..A.A..A.CC..G.

  
Islands  C.CA.A.AA.CGCG.GGA.A.GGCACGCAAG...C.ACCGGGCACCG.,,,.G.CCGAC.A.GGG.GAGCAA.GGAACCG
5'-   CTCATATAATCGCGTGGATATGGCACGCAAGTTTCTACCGGGCACCGTAAATGTCCGACTATGGGTGAGCAATGGAACCG
        |         |         |         |         |         |         |         |   
  440   2319430   2319420   2319410   2319400   2319390   2319380   2319370   2319
        |         |         |         |         |         |         |         |   
3'-   GAGTATATTAGCGCACCTATACCGTGCGTTCAAAGATGGCCCGTGGCATTTACAGGCTGATACCCACTCGTTACCTTGGC
Islands  GAG.A.A..AGCGCACC.A.ACCG.GCG..C,,,GA.GGCCCG.GGCA...ACAGGC.GA.ACCCAC.CG..ACC..GGC

  
Term (99.99)%  --------------------------GCATTGCTTGCTCTTTATTTGAGCGGGCAATGC---------------------
Islands  CACG.G.ACGG......G.GA.A.CAGCA..GC..GC.C...A...GAGCGGGCAA.GC.......A..C.CA.AACGGA
5'-   CACGTGTACGGTTTTTTGTGATATCAGCATTGCTTGCTCTTTATTTGAGCGGGCAATGCTTTTTTTATTCTCATAACGGA
        |         |         |         |         |         |         |         |   
  360   2319350   2319340   2319330   2319320   2319310   2319300   2319290   2319
        |         |         |         |         |         |         |         |   
3'-   GTGCACATGCCAAAAAACACTATAGTCGTAACGAACGAGAAATAAACTCGCCCGTTACGAAAAAAATAAGAGTATTGCCT
Islands  G.GCACA.GCC,,,,,,CAC.A.AG.CG.AACGAACGAG,,,.,,,C.CGCCCG..ACG,,,,,,,.AAGAG.A..GCC.

  
Islands  GG.AGACAGG
5'-   GGTAGACAGG
        |   
  280   2319270   
        |   
3'-   CCATCTGTCC
Islands  CCA.C.G.CC

IGR  -   2319267  2319596  ()  14  xpt pbuX

Blast Hits

ID Organism Class Accession Start End Operon
0 Bacillus subtilis B/C NC_000964.1 - 2319267 2319596 xpt pbuX [COG0503 COG2233]
1 Thermosynechococcus elongatus BP-1 Cya NC_004113.1 - 100893 101105 pilB [COG2804]
2 Clostridium tetani E88 B/C NC_004557.1 + 1646758 1646927 CTC01520 [-]
3 Staphylococcus epidermidis ATCC 12228 B/C NC_004461.1 - 1172920 1173561 SE1133 [COG0116]
4 Oceanobacillus iheyensis B/C NC_004193.1 + 786685 787046 OB0739 OB0740 OB0741 OB0742 OB0743 OB0744 OB0745 purF OB0747 OB0748 purH OB0750 [COG0041 COG0026 COG0015 COG0152 COG1828 COG0047 COG0046 COG0034 COG0150 COG0299 COG0138 COG0151]
5 Oceanobacillus iheyensis B/C NC_004193.1 + 1103786 1104162 OB1061 OB1062 [COG0503 COG2233]
6 Lactococcus lactis subsp. lactis B/C NC_002662.1 - 1050989 1051150 pi225 [-]
7 Thermoanaerobacter tengcongensis strain MB4T B/C NC_003869.1 + 586282 586618 TTE0584 [COG2252]
8 Clostridium perfringens B/C NC_003366.1 - 2618137 2618845 CPE2276 [COG0516|COG0517]
9 Oceanobacillus iheyensis B/C NC_004193.1 + 760395 760793 guaA [COG0518|COG0519]
10 Bacillus subtilis B/C NC_000964.1 + 693801 694179 yebB [COG2252]
11 Bacillus halodurans B/C NC_002570.1 + 676373 676723 purE purK [COG0041 COG0026]
12 Bacillus halodurans B/C NC_002570.1 - 1592870 1593694 BH1514 [COG0503]
13 Bacillus subtilis B/C NC_000964.1 + 697799 698120 purE purK purB [COG0041 COG0026 COG0015]

0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  AATTTTTACTTATTTCGTATAAATTTTATGACTTTATACTTAAAATTATGTTATAATCTCAAAAGTGATATTTCGGGTAA
4  --------------------------------------------------------------------------------
5  CTTTTATTCCAAAAAAGT--------------------------------------------------------------
6  ATTTTCTCCTCCAGTTGAGTTTAG--------------------------------------------------------
7  --------------------------------------------------------------------------------
8  TCTAAAAGAAAAATAAGATCACATGAATTAATTTGTGGTCTTATTTTTGTATTTATTAATAAATTTTAGAGCATAATATA
9  --------------------------------------------------------------------------------
10  GAATCAATT-----------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  TGTCTCACCTCATATCATCATTCGTCTTTTATTCGTTTCTCGTAACATGAAAAGACCTAAAACCACGTTCTAGGCTCTTG
13  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  TCGCTATAGCAATATAGAGGAAAGTCCATGCTCACACAATCTGAGATGATTGTAGTGTTCGTGCTTGATGAAACAATAAA
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  TTTAATTAAGACTTAAAAATAAGATTAATATAGAAATGCTTTAGTATTATTTAATAAAAAGTGGATATTTATTTATAATT
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  TCTAGGCAAGCTATAACCATAACGTCATCTTATAAAAAGCACGCGATGATTGTCAACAATACATATGGATGTTTCACGAA
13  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  TCAAGGCATTAATTTGACGGCAATGAAATAAC------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  AGGAATATAAAGGAAATATTTCATTGAGAAGCTTTATTATTACAAATAATATGTAAGATATATATAATAAAATAAAAAAT
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  ACAACCACAATTTCCCCACACACAACTTCGAGATTTGAATAGGGACTGTTCATTTTGCATTTTTTGGATGTTTTTGTTGT
13  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  GTATGTATTAATATGAAAAGTACAACTAATAAGTATATACTA--------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  TTTTTGAATTAAACACCCTTATAATAGGTCTTAAGGAGGTGGTTACAAAGTCTCATCATTCATTCTTTATCCCTCTCCCT
13  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  ACTTCAACCAAGATAGCGCGTTGTTTACACTCGTTCTCCCCTTTACCCTTCTCCCTCTTACTATAAACGGATCCAACAAA
13  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  ACCTTTTCCTCTTGTTTAAGAACGACGTGTTTCAATCTACGCAAACCATTCAAATGATTCCTAAGCAAAGCGCTCTATTT
13  --------------------------------------------------------------------------------

  
0  TCAAAAGCCTGGCGGCGCGGTCGTCAGACTCTTTTATATCGAATCCCCTTGAAATACGAA___TGATATCTAAAAAAACA
1  -------------------------------------------------AGGGAGAAAGG---ATAACTCGTAGTTTCTA
2  -------------------------------------------------AGTTATCTCTC---CCTATTAATTTTCTAAT
3  CTAAGTCATTGGATATGGTTAGAATAGTTTGAAAGTGCCACAGTGACGTAGCTTTTATAG---AAATATAAAAGGTGGAA
4  -------------------------------------------------CAAAACCCGAA---CGTTAT--AAGAAAACT
5  GTATCCATGTTTGTTCAGGAGAAAAATGGCATTGATGATTGAAGTTTTGTTTTATCACAA---TTGTGAGAAAGGTTTTT
6  CGAGTTCCTAGCTCAGTATGATATAATTTGTTAGACCATAAAAATTATCCATGAAACATT---GTTCTATTAAGCTCGAA
7  -----------------------------------------------------AAACGAA---CATTAAAAGAAATTTCT
8  TATTACATGAAAATAAGTGAATTATTTCTTGCAAAGAATATAAAATATGACGTTTAAAAA---TCAGTTGTGAACTTTTG
9  ---------------------------------------------------------------------CCAGTACGAGC
10  AATGGAAACCATCTTTTTGGCAATTTTGCCGGGAAGATGGTTTTATTTGTTTATTACGAA---CAAAATCCGATTTTGCG
11  -----------------------------------------------------AAACGAACATTGATATATAGAAAACAA
12  AAATGGGGCGCTTTTGCTATGGTTTCAAACGTCATTTCTAGGCAAAACACGAATAAATTT---TCTGAATTTAATTCATT
13  -----------------------------------------------------------A---ACACGAACATTAGTAGA

  
0  AAATTAAAGTTCGGGAATTT_TT___ATTTTCAGCCTATGCAAG__A__GATTA__GAAT__CTTGATATAATTTATT__
1  ATGTGCCGCAGGACTGTCAA-TC---ATTTTCAGCCTATGCAAA--A--CCTGG--CGAT--CGCGGTTGCGAAACAT--
2  ATTCTAAATAAGCTAAATTTATT---ATATCAAATATTTTATAA--A--TAGTA--CAATTCATTGATATAATTTATT--
3  CGCGGTAAACCCCTCGAGTG-AG---CAATCCAAATTGGGTAGG--A--GCACT--TGTT--TAGCGGAATTCAACGT--
4  TTACAAAATCATACGAGTTT-AT---ATT----GATTTTTCGT-------ATTT--GATT----TGTTATGCTTAAGCCG
5  CTTTTTTATAATAGCTTGTT-TT---TTTGCCTGCAAATGCTAT--ACTGAATA--CATT--CTTCATCT----TGAA--
6  TCTGGTCAGTTCGGGCATTT-TT---ATTTTGGTATGAATTATT--G--TTATG--TGTG--CTATAATGTTA-------
7  TTAAAAAAATTCGT-AGTAT-CT---ATTGACTTTTTGTTAAAT--A--GTTGC--TAA------GATATA-TTTAGA--
8  AGATTTATTTTATGCATTTT-GT---TGACAAGCTTTCTTTCAT--A--GATTA--TAAT--AAATAAA-AATTAAAC--
9  CTGCTTAGTAGAATAAGAAC-AT---GTGAAAATATAAGTGATA--A--AAGTC--GATT--TCTATTATAATTTGAA--
10  CGACTATTGTTCGC---TTT-TT---GTATT--GTTTTTTCAAA--A--T------GAA---CTTGGTACAATAGAC---
11  ATATT---GTTCGAGTTTTG-TTGACAAGATAAGCATTTGCCTGTAA--GATTAACGTAC--ATTGAGTTAAATTACG--
12  CATTCGTTTTTTCCTGCAAA-GG---GGTTTTCATTGACGACAG--A--ATCCT--ATAT--AATGCCATCATACATTT-
13  ATGAATTTTTGTATCGTTCG-AT---AATATCGTTGACATTATC--C--ATGTC--CGTT--GTTAAGATAAAC-ATG--

  
0  ACA___A________TATA_ATAGGAA_CA__C___T_CATATAATCGCGTGGATATGGCACGCAAGTTTCTACCGG_G_
1  TCA---T--------CACC-AGAATTG-CC--G---A-CAAAAATGTCAATAAAAATAAACCGTGAAAATACCCATG-A-
2  ACA---A--------TTGT-GGAATAA-TT--A---T-AAATAGATAGCAACTAATAGTGAATAGCTATTCATTATT-A-
3  ATA---G--------ACGA-GACGATT-TT--T---A-CGCGAAAGTAAAAATATGTAGACAGATGGTTACCACCGACG-
4  ACA---A--------TTGA-AAATGAA-C---C---T-CATATAAATTTGAGAATATGGCTCAGAAGTTTCTACCCA-G-
5  ACC---T--------TATATATAGTTT-TT------T-CATATAATCGCGGGGATATGGCCTGCAAGTTTCTACCGG-T-
6  --------------------------------------------------------------------------------
7  AAA---A--------TTTA-ATAAGAAGCA--C---T-CATATAATCCCGAGAATATGGCTCGGGAGTCTCTACCGA-A-
8  AAA---A--------CGGA-ATATAAA-CAAAC---T-CGTATAAGCTT-TGAATAAGGCAAGGC-GTTTCTACCGG-A-
9  TCA---A--------TTTT-TATCCAA-TG--CCTTT-CGTATATCCTCGATAATATGGTTCGAAAGTATCTACCGG-GT
10  ACAGAAA--------TCAA-ATAAGAT-GA--A---TTCGTATAATCGCGGGAATATGGCTCGCAAGTCTCTACCAA-G-
11  AAA---AACGTTCTTTATA-TAAAGTA-C---C---T-CATATAATCTTGGGAATATGGCCCAAAAGTTTCTACCTG-C-
12  ACA---T--------TAAA-AAAAG---CA--C---T-CGTATAATCGCGGGAATAGGGCCCGCAAGTTTCTACCAG-G-
13  AAA---T--------CAAA-ACACGAC-C-------T-CATATAATCTTGGGAATATGGCCCATAAGTTTCTACCCG-G-

  
0  C_A_CC___GTAAAT_G_T_CC_G_ACTATG__GGTGAGCAA__TGGA___ACCGCACGTGT_AC__GGTT_TTTTGTGA
1  A-A-TC---TCTGGG-A-A-GG-T-TGTTGC--TACTATAGT--AGGC---AAGCCATCGAT-AC--CCCA-ACATGCCC
2  A-C-TA---AAGGAA-G-G-GG----------------------------------------------------------
3  T-A-CCAGTGTAACTAG-T-AC-ACATTATG--AGTA--CAA--CGGA---ACAGAACATG-------GCT-TACAGAAA
4  C-A-CC---GTAAAT-G-G-CT-GGACTATG--AGGGAAGA---TGGA---TC---ATTTCT-AT--TATAATTTTATGA
5  TTA-CC---GTAAAT-G-AACC-G-ACTATG--GAAAAGCGG--AAAA---TTCGATATTCT-AT--CTAT-CAAACTCA
6  --------------------------------------------------------------------------------
7  C-AACC---GTAAATTG-T-TC-G-ACTATG--AGTGAAAGT--GTAC---CTAGGGTTCCA-GC--CTGG-CAACAGGC
8  A-A-CC---TTAAAT-T-T-CC-G-TCTATG--AGTGA--AT--TTGATATACTATAGGTGT-AC-------TATAAGCA
9  C-A-CC---GTAAAT-GAT-CT-G-ACTATG--AAGGCAGAAGCAGGT---TCGGTTAAGGT-ACCTGGAT-TTCTGTCT
10  CTA-CC---GTAAAT-G-G-CTTG-ACTACG--TAAACATTT--CTTT---CGTTTGATATA-AA--TAAA-ACACGGTT
11  TGA-CC---GTAAATCG-G-CG-G-ACTATG--GGGAAAGAT--TTTG---GATCTTCTGCT-TT--TGAA-TAAAGGCG
12  C-TGCC---GTAAACAG-C-CT-G-ACTACG--AGTGATACT--TTGA---CATAGACTAGTCAT--GCCA-TTTTG-GA
13  C-AACC---GTAAAT-T-G-CC-GGACTATGCAGGAAAGTGA--TCGA---TAAAACTGACA-TG--GATA-TATCGCAG

  
0  T__ATCAGCATTGCTT__G_CTCTTTATTTGAGCGGGC___AATGCT___TTTTTTAT____TC___TCATAACGGAGGT
1  T-------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  T--ATCATCACTAGTTTAG-CTCTCCCAATTATGGAGA------GCT---TTTTTAAT----TGAAATCATAATTGATTT
4  T--CTAAGGCTTAGGT--T-AAGCGACCTGGTCTATGG---AACATG---AACGGTAA----TG---GAATGATTAAATG
5  A--AGACTATCGTTTT--T-AAATTTTCGACATTTCAA---GCTCGG---AAATCTGC----TT---TTTTATAGGCGGA
6  --------------------------------------------------------------------------------
7  G--TTCGGTCCGAGCG--G-TACAGGTATATGGGTTTC---CATATA---CCACACCT----TA---GGGATAAAAGCCC
8  T--ATTAACTTCACTT--G-GGAGTTATT-------------ATGCT---TTTTTTGA----AA---ATAAAATTTCATC
9  T--TTTAG-ATAGCTA--T-GTCTATATAGCTAGTGAA---GGGCAG---TTTTCCAG----GT---TTTTTCATAGGTA
10  A--TTTATTCAAACTG--A-AATCCGTCTGTAGTCAGC---GTCCCA---AAATGTAT----TG---GGACGTTTTTTAT
11  T--GCCGACCAAGTTA--G-TAGGTTGCGTTCTTTTTT---ATGTTC---AAAAAGCG----CG---GAATGAGCGATCT
12  CCGAACGTCAAGGTTT--CACTCGCTTATTGAGTGTGCCAGAACGTTCGGTTTTTTGTGTTATG---TAAAAAAGGAGGA
13  A--AGCGAACGACTGA--C-GATACATGTACCATGCCC---GGTTTG---TATTGCTT----CC---TCATAAGTGCAAT

  
0  AGACAGG_________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  AGAATAATTTATTACAATATACACTTTACATTTATGGTTTTCCGCTTCAAAATCAAATTAATTAATACTTATAAATATTA
4  ATGTTCGTAAATTACAAGTCTATTCATCTTCTCTCTATTCATAATAGATGGAAGATAATAGACTTTTTCGTTTGTAAAAA
5  TTTTCGAGCTTTTTATATTTTAGGAGGAATGGAAGC--------------------------------------------
6  --------------------------------------------------------------------------------
7  GGGAGGATAGGTTTCACTCTATTCCTGCCGGGCTTAATTTTTTCTAGAAATTAAAAAAGGAGGAAAACTA----------
8  TTTTGTGTATATTTGCAAGTTTGCTTTCAAAAAATAAGTAGAAGTTTAAAAGGTAGAAATACGGAAAAACATTTAATTGT
9  AATGTTTTTCGTATTATACATTTATTTTCGAATGGATATAGTCATATACTTTCCAAGGTATACGGTATGCCTACGAAACA
10  TTGGCGTTTTCAGGACAGAATAAATAGCAAAGAGTGAAGGGAGTCAAATAGC----------------------------
11  TTCTCTAAGGAATTCGCTTGTCCTGCGCTATTTTTATTTCAAGGGAGAATACAGGAGGGTTAGTC---------------
12  ATACAACG------------------------------------------------------------------------
13  GCAGAGCGGGTATTTTTTATTTTCTGAAAACAAAAGCATTAGAAGGTGGGGAACAGA-----------------------

  
0  ______________________________________________________
1  ------------------------------------------------------
2  ------------------------------------------------------
3  AAATTATACATATATTGATTCAATAAATTAAAAGGAGACTCGGTC---------
4  GATATAGAAAGAGGGATTGG----------------------------------
5  ------------------------------------------------------
6  ------------------------------------------------------
7  ------------------------------------------------------
8  ACGTAAATAACTTAAAGATAGTGTGTGGAGGCGATAGT----------------
9  CAAACTAATAATATCAAAGACAAGCCTATAGTAAGTATAGATAGGAGAGCGATT
10  ------------------------------------------------------
11  ------------------------------------------------------
12  ------------------------------------------------------
13  ------------------------------------------------------