BLISSBreaker Lab Intergenic Sequence ServerHome

Intergenic view options: Interleaved

NC_000964.1 Bacillus subtilis (+ 2220629 to 2221580) circular

Islands  AG.AGG..CC.CAC...GACAA..A..A.A.AAGC,,,.AG...CG.,,,C,,,,,GAAGC,,,,,G...CA.,,,,.A.
5'-   AGTAGGTTCCTCACTTTGACAATTATTATATAAGCAAATAGTTTCGTAAACAAAAAGAAGCAAAAAGTTTCATAAAATAT
   |         |         |         |         |         |         |         |        
   2220630   2220640   2220650   2220660   2220670   2220680   2220690   2220700  
   |         |         |         |         |         |         |         |        
3'-   TCATCCAAGGAGTGAAACTGTTAATAATATATTCGTTTATCAAAGCATTTGTTTTTCTTCGTTTTTCAAAGTATTTTATA
Islands  .CA.CCAAGGAG.G,,,C.G..AA.AA.A.A..CG...A.C,,,GCA...G.....C..CG.....C,,,G.A....A.A

  
Islands  A.CGGGAG,,,C.,,,GG...C...AA..G..AACAG.G.AG,,,C,,,C.G...ACAGAAGGAGA.G..GA...G,,,,
5'-   ATCGGGAGAAACTAAAGGTTTCTTTAATTGTTAACAGTGTAGAAACAAACTGTTTACAGAAGGAGATGTTGATTTGAAAA
   |         |         |         |         |         |         |         |        
   2220710   2220720   2220730   2220740   2220750   2220760   2220770   2220780  
   |         |         |         |         |         |         |         |        
3'-   TAGCCCTCTTTGATTTCCAAAGAAATTAACAATTGTCACATCTTTGTTTGACAAATGTCTTCCTCTACAACTAAACTTTT
Islands  .AGCCC.C...GA...CC,,,G,,,..AACAA..G.CACA.C...G...GAC,,,.G.C..CC.C.ACAAC.,,,C....

  
Islands  ,GAGAACC..AG..,,,GACAAG..GC.GAC.ACC...CAAGGC.GAGA.GG.CAG.,,,.ACAAGGG..A.A.A.GAAG
5'-   AGAGAACCTTAGTTAAAGACAAGTTGCTGACTACCTTTCAAGGCTGAGATGGTCAGTAAATACAAGGGTTATATATGAAG
   |         |         |         |         |         |         |         |        
   2220790   2220800   2220810   2220820   2220830   2220840   2220850   2220860  
   |         |         |         |         |         |         |         |        
3'-   TCTCTTGGAATCAATTTCTGTTCAACGACTGATGGAAAGTTCCGACTCTACCAGTCATTTATGTTCCCAATATATACTTC
Islands  .C.C..GGAA.CAA...C.G..CAACGAC.GA.GG,,,G..CCGAC.C.ACCAG.CA...A.G..CCCAA.A.A.AC..C

  
Islands  A.A.GA.A.AG.AA.G.AAG.GGA.AAGAA.,,,..A.G.C..CGA..CCC.CGGA..CG..A.,,,.ACGA..A.....
5'-   ATATGATATAGTAATGTAAGTGGATAAGAATAAATTATGTCTTCGATTCCCTCGGATTCGTTATAAATACGATTATTTTT
   |         |         |         |         |         |         |         |        
   2220870   2220880   2220890   2220900   2220910   2220920   2220930   2220940  
   |         |         |         |         |         |         |         |        
3'-   TATACTATATCATTACATTCACCTATTCTTATTTAATACAGAAGCTAAGGGAGCCTAAGCAATATTTATGCTAATAAAAA
Islands  .A.AC.A.A.CA..ACA..CACC.A..C..A...AA.ACAGAAGC.AAGGGAGCC.AAGCAA.A...A.GC.AA.,,,,,

  
Islands  AA.GAA.GG..A..CA.....,,,..G,,,,,CAA...A......,,,,,..AA..C..G.G...GACC.GGAA..A.GA
5'-   AATGAATGGTTATTCATTTTTAAATTGAAAAACAATTTATTTTTTAAAAATTAATTCTTGTGTTTGACCTGGAATTATGA
   |         |         |         |         |         |         |         |        
   2220950   2220960   2220970   2220980   2220990   2221000   2221010   2221020  
   |         |         |         |         |         |         |         |        
3'-   TTACTTACCAATAAGTAAAAATTTAACTTTTTGTTAAATAAAAAATTTTTAATTAAGAACACAAACTGGACCTTAATACT
Islands  ..AC..ACCAA.AAG.,,,,,...AAC.....G..,,,.,,,,,,.....AA..AAGAACAC,,,C.GGACC..AA.AC.

  
Islands  .AGCA..GG.GCAGACC.GCCCAAG.CA..,,,.GCACG.A.AA.G..CC..A.ACACGCA..ACAA.ACCAA.A.A.GG
5'-   TAGCATTGGTGCAGACCTGCCCAAGTCATTAAATGCACGTATAATGTTCCTTATACACGCATTACAATACCAATATATGG
   |         |         |         |         |         |         |         |        
   2221030   2221040   2221050   2221060   2221070   2221080   2221090   2221100  
   |         |         |         |         |         |         |         |        
3'-   ATCGTAACCACGTCTGGACGGGTTCAGTAATTTACGTGCATATTACAAGGAATATGTGCGTAATGTTATGGTTATATACC
Islands  A.CG.AACCACG.C.GGACGGG..CAG.AA...ACG.GCA.A..ACAAGGAA.A.G.GCG.AA.G..A.GG..A.A.ACC

  
Islands  GGG.A.A...ACA.C.AA.GG.,,,,..AAGGGAACAGA.G.ACCCA.AGCAC..CCA...CCACACCC.A.CC,,,...
5'-   GGGTATATTTACATCTAATGGTAAAATTAAGGGAACAGATGTACCCATAGCACTTCCATTTCCACACCCTATCCAAATTT
   |         |         |         |         |         |         |         |        
   2221110   2221120   2221130   2221140   2221150   2221160   2221170   2221180  
   |         |         |         |         |         |         |         |        
3'-   CCCATATAAATGTAGATTACCATTTTAATTCCCTTGTCTACATGGGTATCGTGAAGGTAAAGGTGTGGGATAGGTTTAAA
Islands  CCCA.A.,,,.G.AGA..ACCA....AA..CCC..G.C.ACA.GGG.A.CG.GAAGG.,,,GG.G.GGGA.AGG...,,,

  
Islands  .CA....CC.AA..CCACC.C,,,,.CACCC.....CACA.CG.AA.CGC.A.CG.,,,,GCC..,,,.A.CAACA....
5'-   TCATTTTCCTAATTCCACCTCAAAATCACCCTTTTTCACATCGTAATCGCTATCGTAAAAGCCTTAAATATCAACATTTT
   |         |         |         |         |         |         |         |        
   2221190   2221200   2221210   2221220   2221230   2221240   2221250   2221260  
   |         |         |         |         |         |         |         |        
3'-   AGTAAAAGGATTAAGGTGGAGTTTTAGTGGGAAAAAGTGTAGCATTAGCGATAGCATTTTCGGAATTTATAGTTGTAAAA
Islands  ,G.,,,,GGA..AAGG.GGAG....AG.GGG,,,,,G.G.AGCA..AGCGA.AGCA....CGGAA...A.AG..G.,,,,

  
Islands  CCCC.C..C,,,...AC.CGA...C..CAA.A...AGA.,,,GCAACCAC...CCCC.AC.C.CAC..A.G....ACGA.
5'-   CCCCTCTTCAAATTTACTCGATTTCTTCAATATTTAGATAAAGCAACCACTTTCCCCTACTCTCACTTATGTTTTACGAT
   |         |         |         |         |         |         |         |        
   2221270   2221280   2221290   2221300   2221310   2221320   2221330   2221340  
   |         |         |         |         |         |         |         |        
3'-   GGGGAGAAGTTTAAATGAGCTAAAGAAGTTATAAATCTATTTCGTTGGTGAAAGGGGATGAGAGTGAATACAAAATGCTA
Islands  GGGGAGAAG...,,,.GAGC.,,,GAAG..A.,,,.C.A...CG..GG.G,,,GGGGA.GAGAG.GAA.AC,,,,.GC.A

  
Islands  CG...A.CCCC.AA.CACCA..CGA.ACAGC,,,.C.CC..A.G...AC.GGC.....,,,C.C...AA.A......ACG
5'-   CGTTTATCCCCTAATCACCATTCGATACAGCAAATCTCCTTATGTTTACTGGCTTTTTAAACTCTTTAATATTTTTTACG
   |         |         |         |         |         |         |         |        
   2221350   2221360   2221370   2221380   2221390   2221400   2221410   2221420  
   |         |         |         |         |         |         |         |        
3'-   GCAAATAGGGGATTAGTGGTAAGCTATGTCGTTTAGAGGAATACAAATGACCGAAAAATTTGAGAAATTATAAAAAATGC
Islands  GC,,,.AGGGGA..AG.GG.AAGC.A.G.CG...AGAGGAA.AC,,,.GACCG,,,,,...GAG,,,..A.,,,,,,.GC

  
Islands  A.AAGCA.G.....AGA..ACGA.AA.CCCCCC..C.C.,,,.GC..CAGAA..CACC.C..AACC.GGAGC.A..AACA
5'-   ATAAGCATGTTTTTAGATTACGATAATCCCCCCTTCTCTAAATGCTTCAGAATTCACCTCTTAACCTGGAGCTATTAACA
   |         |         |         |         |         |         |         |        
   2221430   2221440   2221450   2221460   2221470   2221480   2221490   2221500  
   |         |         |         |         |         |         |         |        
3'-   TATTCGTACAAAAATCTAATGCTATTAGGGGGGAAGAGATTTACGAAGTCTTAAGTGGAGAATTGGACCTCGATAATTGT
Islands  .A..CG.AC,,,,,.C.AA.GC.A..AGGGGGGAAGAGA...ACGAAG.C..AAG.GGAGAA..GGACC.CGA.AA..G.

  
Islands  CAC.AGCG,,,,,,CAA.AGAC,,,.AC,,,.AA.A.G.A.A.AA.,,,.CCA.AAG.GAGGAGG.GAGA.A
5'-   CACTAGCGAAAAAACAATAGACAAATACAAATAATATGTATATAATAAATCCATAAGTGAGGAGGTGAGATA
   |         |         |         |         |         |         |         |
   2221510   2221520   2221530   2221540   2221550   2221560   2221570   2221580   
   |         |         |         |         |         |         |         |
3'-   GTGATCGCTTTTTTGTTATCTGTTTATGTTTATTATACATATATTATTTAGGTATTCACTCCTCCACTCTAT
Islands  G.GA.CGC......G..A.C.G...A.G...A..A.ACA.A.A..A...AGG.A..CAC.CC.CCAC.C.A.

IGR  +  2220629  2221580  ()  19  yonP

Blast Hits

ID Organism Class Accession Start End Operon
0 Bacillus subtilis B/C NC_000964.1 + 2220629 2221580 yonP [-]
1 Leptospira interrogans serovar lai str. 56601 chromosome I Sp NC_004342.1 + 317293 318006 thiX [COG0526]
2 Clostridium perfringens B/C NC_003366.1 + 769642 770016 CPE0613 [COG0561]
3 Clostridium tetani E88 B/C NC_004557.1 - 588488 588596 asnC [COG1522]
4 Mycoplasma penetrans B/C NC_004432.1 + 528763 528971 MYPE4040 MYPE4050 MYPE4060 [COG0017 COG0558 COG0172]
5 Leptospira interrogans serovar lai str. 56601 chromosome II Sp NC_004343.1 + 125686 126388 LB132 [-]
6 Methanococcus jannaschii A NC_000909.1 + 1190053 1190141 MJ1247 [COG0794]
7 Buchnera aphidicola str. Sg (Schizaphis graminum) P-g NC_004061.1 - 369346 369491 mviN [COG0728]
8 Chlorobium tepidum TLS Ch NC_002932.3 + 532215 532363 CT0525 [COG1959]
9 Staphylococcus aureus subsp. aureus N315 B/C NC_002745.1 + 608054 608419 sdrD [-]
10 Sulfolobus tokodaii A NC_003106.1 + 1840967 1841052 ST1829 [-]
11 Listeria monocytogenes strain EGD B/C NC_003210.1 - 1043451 1043820 lmo1013 [COG0668]
12 Bacillus subtilis B/C NC_000964.1 - 2202241 2202351 yopV [-]
13 Bacillus subtilis B/C NC_000964.1 - 2169486 2169551 yorZ [-]
14 Streptococcus pyogenes B/C NC_002737.1 + 1646882 1647240 ska [-]
15 Bacillus subtilis B/C NC_000964.1 - 2216881 2217207 yonX [-]
16 Bacillus subtilis B/C NC_000964.1 - 2209396 2209571 yopK yopL [- -]
17 Bacillus subtilis B/C NC_000964.1 + 2059948 2061404 rapK phrK [COG0457 -]
18 Bacillus subtilis B/C NC_000964.1 - 2219202 2219575 yonT [-]

0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  AATCCATTGTTCGCT-----------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------
16  --------------------------------------------------------------------------------
17  AATTCCCTCCTAATTTATTTGTTTAAAATCACGATTTTAACTATTTATGATCCATTAGTCACTTCCAAAGCAACTTCCAT
18  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
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7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
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11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------
16  --------------------------------------------------------------------------------
17  TTAACTCATAATTAATATATAAAATGTAAATGGAGTTGATATATTTGAACCTTCGAAAAATTTTATTGAGTTCTGCTTTA
18  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
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5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------
16  --------------------------------------------------------------------------------
17  TCATTAGGTATGCTGGTATCTGCTGCTCCTGTCTTGGCAACAAGTTCTTCGTCTGAAGTGATAGTAAAAAGTGATGAATA
18  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
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11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------
16  --------------------------------------------------------------------------------
17  TGATTATGACACCATATATCAGCTTAGCCCCCTACCAAACTTCAAGCCTTCTATTGAATACAATGGATATACTTATACTC
18  --------------------------------------------------------------------------------

  
0  ____AGTAGGTTCCTCACTTTGACAATTATTATATAAGCAAATAGTTTCG_TAAACAAAAAG___AAGCAAAAAGTTTCA
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  ----TTTTGTTTTCTTACATTTATTTCTTCGAGAAAATCAAAATGCATCTCTAAATTAAAAGTTTAAAAGTAAACTCACT
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  -------------------------GCGTCGTATCAGGACATGGCCGGAC-AATGGCTGTTG---GTGGATATTATTTCA
9  --------------TATGATTAACTTAACCAGGTCCATGTGGCCTGGTTT-TTTCTGTTTAG---AAATTCCCAGATATA
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------
16  --------------------------------------------------------------------------------
17  TCACACGTTATTATTTCGATTACTCAATTCAGTTTTATACGGCTATTTAT-ACAAAAGTTGT---TTAAACTTATAGGGA
18  --------------------------------------------------------------------------------

  
0  TAAAATATATCGGGAG______AAACTAAAGG___TTTC__TTTAATTGTTAACAGTGTAGAAACAAACTGT___TTACA
1  --------------------------------------------------------------------------------
2  ---------------------------------------------------------------------------ATTGA
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  TAAGATTCATTTTTA--------AATTGAAGTCGATTTCAATTTAAAGGA-ATCATTTTATATACGAA-TGT---GAA--
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  TAAAATATATCGGCAGCCCGAAAGAATAAAGG---TAGA--TCGGGAATTTCCTGAAACAGGTGCGGGTTTA---TCCTG
9  AAACAAAAAATCTTTA------AGGAATAGAT---GCAA--TTTAATTTGTTACAGAAATGTAATTGTCTATGAATTAGA
10  --------------------------------------------------------------------------------
11  ------------------------------------AAT--AAAATCCCCTTTCTTTTTTTAGATTGAATTA---TTTAC
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------
16  --------------------------------------------------------------------------------
17  GCTTTTTTAGCTCCTT------TTTCACCTTT---TTAA--GCAAGATATTTCTTTCTATGCGGTCTTTTAT---GTATG
18  --------------------------------------------------------------------------------

  
0  GAAGG__AGATGTTGATTTGAA____AAAGAGAACCTTAGTTAAAGACAAGTTGCTGACTACCTTTCAAGGCTGAG_ATG
1  --------------------------------------------------------------------------------
2  CCCCC--CATTAAATTATGTAT----TTACAGTAAGTAAAATAGAGAAATAATTTATTTTTAAGAATTAATTTATT-ATA
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  -AATG--ACAT-TTAAATTGTA----AAAGAAA---TT--TTTAATA----TTCGTGGATACTTTT--ATTTTGATTATT
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  TTTTG--CCATCACTCTTTTTT----TTGTTT------------------------------------------------
9  AAAGCTAAGATATTAATTTTAAGGGCAAATAATACTATTTTTTATGATAATTAAATAAAGA--TTACAAAACTCA-----
10  --------------------------------------------------------------------------------
11  TAGGC--AAAAATTCGGCCCAT----ATCACTTTTAAAAAAGCAATAACATTTATCATTGTACACAAGTTTTGGCT-TAG
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  ------------------------------------------------------------------------AGCC-ATT
15  --------------------------------------------------------------------------------
16  --------------------------------------------------------------------------------
17  AAATC--AAATGCTTTCCCTAA----TTCCTTCTCTTCTGTTACCGCTGAGTCCATATCTTATATTGCATCTAAGG-TTT
18  --------------------------------------------------------------------------------

  
0  GTCAGTAAATACAAGGGTTATATATGAAGATATGATATAGTAATGTAAGTGGATAAGAATAAATTATGTCTTCG_ATTCC
1  --------------------------------------------------------------------------------
2  TACATTAAAT-CAAAAATTCTAAATAAA----TGACA----AATTTCATTATATCAACATGATAGAAGTATTTC-AATAT
3  --------------------------------------------------------------------------------
4  -------------------------------------AATTTATTCCTAATATAATAATCTTTAAAGTTTTCAT-TTAAG
5  AACTTTATAGATCAAGATCATTCGGGTAGAT--GAAA-AGTTTCTTTTTTATGTAAAAA-AATTGAACACTT---AT--C
6  --------------------------------------------------------------------------------
7  ------------------------------------------------------------------------------TT
8  --------------------------------------------------------------------------------
9  -----TAAAAACTT---TTATTTAAACACAAATGTTAAA-TAACGTTTTACGATAAAGAAAAATAAT----TAA-AGTAT
10  --------------------------------------------------------------------------------
11  TTTCACATCATACAGTTCAATTTGCGCTAATTTAAGCTTTTAAGAAAGCGCCTCCATCTTACAACAACAGTGGC-TAACA
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  CCTTTCATGACGGTCTTTAAACCATTATAACACATGACTCTTTATCACACAGTTCGGTTTGTTGTCAGCACGAT-TTTGT
15  --------------------------------------------------------------------------------
16  --------------------------------------------------------------------------------
17  AGTCAGTCGAGATCATTGAATATATAGTACTTTACTCAGAACATTTTGCTTATTAAGGACATAATAAGTGTTCGTATTAA
18  --------------------------------------------------------------------------------

  
0  CTCGGATTCGTTATAAATACGATTATTTT_TA_ATGAATGGTT__AT_TCA__TT_______TT_TAAATTGA___A___
1  --------AAGAACATTTTTCAAAAAATT-TT-AGAAATCTTTTCAT-TAA--CT-------TT-TAAACTGA---A---
2  TTTAAATTCCTTA-AAATA-----ATTAA-TA-AAAACT--TT--AT-GAT--AT-------AT-TAATGATA---C---
3  ---------ATTAAGCCTACTAT-ATTAT-TA-TTCTATATTTT-AT-TGA--AT-------ATATCAAC--A---A---
4  TAATAAAAAACTACAAATAACATTATATAATA-AATAATGATT--TT-TTAAATA-------TT-TTATTAGA---T---
5  ATTGAATTAACTTTAAATTTTTCTATTTA-TA-ATATAAAGGT--AT-TCA--AT-------TT-TAAAT--A---A---
6  ------------------------------------------------CCA--TT-------TT-TTAAATAACTTA---
7  TTAGTTTTAATTAATGTAGAAAATATTTA-TATATTAACATTT--TT-TTA--TTAAAACACTC-TATATGTA---A---
8  --------------------------------------------------------------------------------
9  TGTGCTTTATCTAAAAATGTAATACTAT---------ATTGAT--AT-ACA--TT-------TT-TGTATTTA---A---
10  ------------------------------------------------------------------AAATTGA---A---
11  GTTTTTTAATTTTTTTTGTAAAAAAAGAA-GA-TTTTTCGGGA--AA-AAC--AC-------GC-AATTTCCG---G---
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  ATTTTCTGCCTTTTTAATC--ATTAAAGC-TA-AATAATGGTT--AT-TCA--TT-------TT-TAGCAAGA---ACAT
15  --------------------------------------------------------------------------------
16  --------------------------------------------------------------------------------
17  TTTTTCCT-GTTACGATAACGATCAAAAA-CA-A--AATAATTT-ATCTCA--TT-------TT-AAGACAGA---A---
18  --------------------------------------------------------------------------------

  
0  __AAACA_____A_TT_T_ATTTTTTA____AAAATTAA___TT_CTTG________TGTTTG__ACCTGGAATTATG__
1  --AAACC-----A-TT-TTATTTTTCT----AAAAGTAATAGTT-CCTA--------AATTAG--AGTTGAAAATTTC--
2  --AAACA-----A-AT-T-ATT----A----CAAATTAT---TTGCAAT--------AATTTG--AAAAAAAGCAATG--
3  --AAACA-----A-TT-T-ATTTTTTG----TA---TAA---TA-CTTG--------TATAAT--AATATTTATAAAT--
4  --AAAAA-----T-TT-TGATGTTTGA----AAACTTCA---TT-ATTA--------ATTTAT--TATATAAAATGTT--
5  --AAACA-----T-TT-C-ATTTTTTA----ATTAGTCT---TC-AAAA--------TCTATC--AACTTCGGTTTAA--
6  --AATCTTTCTGA-TT-T-ATTTTTTA----ATAATTAA---TT-CATA--------GATTTG--GATACATTTGTGA--
7  --AAATAT----A-TT-T-ATTTTTTA----AAAATTAA---TT-CTAA--------ATTATG--ATTATAATGTTTT--
8  --------------------------------------------------------------------------------
9  --AA-CA-----A-TTGT-ATTATTTA----AAAATTTG---AT-GAAT--------TAGGAG--TAATCTA--------
10  --AACCA-----AGTT-T-ATATTTTA----AAAACTAT---GT-TTTA--------AGGTAT--AACGAGTAGTTTT--
11  --TAACA-----A-TT-T-ATTTTTTA----AAACAGCA---TT-TTTG--------TAAAAT--ATTTGTTAGAATA--
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  TCAATCA-----A-AT-G-GCTATTTATCGGAAGATTAA---TT-TAAT--------TTATTGGAAGATTAATTTATGTT
15  --------------------------------------------------------------------------------
16  --------------------------------------------------------------------------------
17  --GTTAT-----T-CT-G-CTTTTTCA----AAAAAATA---TT-CTTGATTTTCCCTTTTTT--AGATGCATCCATA--
18  --------------------------------------------------------------------------------

  
0  _ATAGCATTGGTGCAGA_CCTGCCCAAGTCATT_AA___ATGCA__CGTATAATGTTCCTTATACACGCATTACAATACC
1  -ATATCTAACATTAATA-AAACAGCATTATCCA-TT---TACTT--TTGATGGATAAGAAACAAAAGAAAATTAATTTTT
2  -ATATGATATAATCTTA-AATGTATATGTCAAA-AAATAATGAAATAGTATAATAATTTTGATATA---ATTACC-TAGT
3  -ACATTTTTTTGAG------------------------------------------------------------------
4  -AAATTTATATTTTTTA-AAAATAAAAAACAAA-TA---AAACA--AGGACAAATAAATATT------------------
5  -GCATTTTGAAAATTGC-TTTAGAGCTTTCGAA-AG---TGATA--AGCCAAATTGGGTAAAGCCTCAATTGTATCTAAC
6  -AAATAACTTCGATAG----------------------------------------------------------------
7  -AACCTCATAGGTTAGA-TTAATTTCAA----------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  -ATTAAGTAATGTTAAT-TAAAAGATATC---------------------------------------------------
11  -GAAAAGGACATTTCAT-TAGGAAGGGGGAGAT-GA---AATGG--ATGGAGAACTTTCAAAGGATGTGGACCAAAAA--
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  TATACTAAAAAAGTATT-GTTGCCC---TTTTT-TC---ATTAT--CATGACATTATCATTAAGATATCATTTAAAAACA
15  --------------------------------------------------------------------------------
16  --------------------------------------------------------------------------------
17  -A-AGCATTCGATCATAACCATTATATGTAACTGAA---ATGCA--GGTATAAGAGTTATTATATAGGGATTACACTACC
18  --------------------------------------------------------------------------------

  
0  AATATATGGGGGTATATTTA_CATCTAA_TGGT_AAAATTAAGGGAACAGATGTACCCATAGCACTTCCATTTCCACACC
1  CAAAACTCTATTCATAAAAA-TTAATGT-ATCA-TTTCTTAAAATGAAAATAGGAATTTCCGAATTTATTTTTATTTTAC
2  ATAAAATAAAGAAAAATTTAACATATAT-TTGT-AAA--TAAAGTTTAAGAGGTGAATTA--------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  GTTCTATTGATTCATAAAAC-TAAAAAG-AATC-ATTTCTGTTTATTTAAGGCGATTCGTAGTCAAATAAATAAAATCAT
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  ATCAT-TAGATTTTTGTTTG-TATCTA-----T-AAAATTATTATGTTATTCTAATAATGGGGATTGAAACTTAACTTTT
15  --------------------------------------------------------------------------------
16  --------------------------------------------------------------------------------
17  ATTATCTGGGGGTGTATTAA-CATCCAAATACTCAAAAGCAAG--AACAAATGTACCCATAGCACTTCCATTTCCACACC
18  --------------------------------------------------------------------------------

  
0  CTATCCAAATTTTCATTTTCCTAATTCCACCTCAAAATCACCCTTTTTCACATCGTAATCGCTATCGTAAAAGCCTTAAA
1  AGTAAAGCAAAAATTTTCAGAAAGCGGATCTTTTACTGAGTTTATGTTATTTATTAGAGTTTATTCAGAACCATATAATA
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  GTCGAATTCAAGGATACTTATTTTGAATTTTATTTATTTGCAAGTCAATTTATCGTACTTCCTAGATTTGAAAGTAATAA
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  AGGAGGTTTCT---------------------------------------------------------------------
15  ------------------------------------------------------------------GAATAGCGTATGAA
16  --------------------------------------------------------------------------------
17  CTATCCAAATTTTCATTTTCCTAATTCCACATCAAAATCACCCTTTTTCACATCGTAATCACTATCGTAAAAGCCTATAG
18  -----------------------------------------------AAACAAGCCCTATTTTGGGGCTTTTCTTTAGAA

  
0  TATCAACATTTTCCCCTCTTCAAATTTACTCGATTTCTTCAATATTTAGATAAAGCAACCACTTTCCCCTACTCTCACTT
1  AAGTACCGAGTATTTTACTCTGAAATAAGGTTTTGTAATAAAAATTTAGGATACTTAATTTGATAAGGATCTAGTAACAT
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  ATTTTGAGTGAATTCTCATTCCAACAAAAAATATCCGAAGCTACTTTAAAATAGAAATGATCTCTTCGCTTTATATGTT-
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------
15  AAAAAAAGCAATAAATCGTTTTTGAAACCCTTGGTACATAAGGGTTTTATAGGGGTCTCTCGTAGAAGAAAAGAAGTAAA
16  --------------------------------------------------------------------------------
17  TATCAACGTTTTTCCTTCTTAAAATTTTCTTTTTTTATA-AATATCTTCCCAAAACAACCACTTTCCCCTACTCCCGCTT
18  AATAAAGTCGAACATAAGTTTTTATTTTGTTGGTAGGAGGCTTTACCTTGTATCATATTTCACTTCTTGAGGAAAGAAGA

  
0  ATGTTTTACGATCGTTTATCCCCTAATCACCATTCGATACAGCAAATCTCCTTATGTTTACTGGCTTTTTAAACTCTTTA
1  CTCATATTGAATGATTTATTATGTAAATGTATGAAAATGATACTATATGAGCTTGTTTTAAAGTTAGAATGTTGGATCTC
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------
15  TAAATTAAATAATAAAATAAGAGAATGGGGGTGCTGCTAATTGTTCAAAACGGTTCGTTCCTCACCTGAACAATTTTTGC
16  --------------------------------------------------------------------------------
17  ATGTTTTACGATCGTTTACCCCCTATTTACTAATTAAAGTATCAAAAATTCTTATGTTTACTGTCTTTTTAG-CTCATTA
18  CGAAAAATTTACACCGGATCCCATCATACATTCCACCTAATCACACTCATACATTAACACGCTCTCAGAGCCAATATAAC

  
0  ATATTTTTTACGATAAGCA__TGTTTTTAGATTACGATAATCCCCCCTTCTCTAAATGCTTCAGAATTCACCTCTTAACC
1  TTTCAAAAAAGCCAACGAT--CTCGAGTTAAACTCAATTATTGAGTAATTCTACATTTTTGTAAAATGGACTGTTAAGTT
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  ----------------------------------------------AATTAGATTCGGTCACATAAATTGGCCGAATCTA
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------
15  TCACACCACCCCCAAACCC--CCTCATGAGCAATTAATATTAACGCTATATCAAATACAAAAAATATGTATTTAATTATT
16  --------------------------------------GACCTTTTGCTTTAGAAGAACACAATGAGGTTTAGTCCTCAT
17  TAAATTTTTACGATAAGCAATTGCCTTTGCTTTTGGATATGACTTGACTGTATTTGGTGACGATTTAACAGAGAAATTTA
18  ACCTCTCTAAGCATCCTTA--ATCAATTCCCAATCCAATTGTATTCTTGTTCATTCAAACAGCACACAAGGCATCTTAAT

  
0  TGGAGCTATTAACACACTAGCGAAAAAACAATAGACAAATACAAATAATATGTATATAATAAATCCATAAGT_GAGG___
1  TTGGTAATATTTTTATGTGTTCGAATAGTAGGATAATTTTTTATCCGAAGATTTTATAAAAAATTATTTGAA-AGGT---
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  ATTGACAGATATTAAATGATGGGTTATAGTTTATTCAAATACAAATAATATGTATATAGGAGATGGTAAAGA-GAGC---
13  ------------------------AAACCGATAGACAAAAACAAATAATATGTATATAATAAATT--TACGTTGAGGCGA
14  --------------------------------------------------------------------------------
15  GATTATTATAGATTATCAAGTTATAATATAAATAACAAATACAAATAATATGTATAAAAACAGGAGGTAGTT-AAA----
16  TGTGTCTAGTTAAAATTGGAATTTTAAAGAGATTACAAATACAAAAAATATGTATAAAATAATTGACTCGTA-ATGT---
17  ATGCTCTTCTGACTTTTTTAACTGCATTGGGCATTATTGTTGATCCAACAACTCAAGGTATTTCTGATAGTG-AACA---
18  ACCATCCATCAACACAC-----AAATAACTTACCACAAATATAAAAAATATGTATATAA-AAATCATGAATT-ATGT---

  
0  AGGTGAGATA______________________________________________________________________
1  TCCAGTGCTCGTCTGAAAAAATAATTAGATGTAACATTTTAGGAATGAGTCGAATTTAAAAGAT----------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  T-------------------------------------------------------------------------------
13  AGGAGAGTGTTA--------------------------------------------------------------------
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------
16  GATCTATAGTATTATTAAGTTAACCAATAAAGACAACAAAAAGAAATGAGGGGAAATA----------------------
17  AGCAATGGATTATGATTCACCGAGATAAACCCCATACCCTTCTCTTGATTGAGGAGGGTATTTTTTTCGTTTTTTCAAAT
18  TATAATAGAGTCATAGGAAAGGAGGTGTACATA-----------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------
16  --------------------------------------------------------------------------------
17  GAAAAAATTGCAGAAAACTTTACATCCTTTTACAATTTTTTCAATGACTATGTTATGATTGTTTTCGAGAGATTTTTGAA
18  --------------------------------------------------------------------------------

  
0  ______________________
1  ----------------------
2  ----------------------
3  ----------------------
4  ----------------------
5  ----------------------
6  ----------------------
7  ----------------------
8  ----------------------
9  ----------------------
10  ----------------------
11  ----------------------
12  ----------------------
13  ----------------------
14  ----------------------
15  ----------------------
16  ----------------------
17  ATTTTCAGAAAGAGGGGTTTAA
18  ----------------------

Complementary Intergenic Regions

IGR  -   2220629  2221580  ()  5  yonR