BLISSBreaker Lab Intergenic Sequence ServerHome

Intergenic view options: Interleaved

NC_000964.1 Bacillus subtilis (- 2171976 to 2172023) circular

Islands  AAGA.CAA....A...AGAG.,,,,,.,,,,.A.A.GGAGG..G...G
5'-   AAGATCAATTTTATTTAGAGTAAAAATAAAATATATGGAGGTTGTTTG
     |         |         |         |         |    
     2172020   2172010   2172000   2171990   2171980   
     |         |         |         |         |    
3'-   TTCTAGTTAAAATAAATCTCATTTTTATTTTATATACCTCCAACAAAC
Islands  ..C.AG..,,,,.,,,.C.CA.....A....A.A.ACC.CCAAC,,,C

IGR  -   2171976  2172023  ()  13  mtbP

Blast Hits

ID Organism Class Accession Start End Operon
0 Bacillus subtilis B/C NC_000964.1 - 2171976 2172023 mtbP [COG0270]
1 Staphylococcus epidermidis ATCC 12228 B/C NC_004461.1 - 1565375 1565432 SE1515 [COG4300]
2 Oceanobacillus iheyensis B/C NC_004193.1 - 745722 746252 OB0704 [COG1292]
3 Fusobacterium nucleatum subsp. nucleatum ATCC 25586 Fus NC_003454.1 - 1678571 1678713 FN1024 [COG0776]
4 Sulfolobus tokodaii A NC_003106.1 - 1384418 1384473 ST1378 [COG2848]
5 Clostridium tetani E88 B/C NC_004557.1 - 34311 34404 CTC00084 CTC00083 CTC00082 [COG0642 COG0579 COG3862]
6 Sulfolobus tokodaii A NC_003106.1 + 1151617 1152385 ST1152 [-]
7 Lactococcus lactis subsp. lactis B/C NC_002662.1 - 1671183 1671412 tkt [COG0021]
8 Clostridium perfringens B/C NC_003366.1 - 1637890 1638105 CPE1388 [-]
9 Thermoplasma acidophilum A NC_002578.1 - 1454922 1454985 Ta1403 [-]
10 Bacillus subtilis B/C NC_000964.1 - 2195024 2195226 yoqN [-]
11 Bacillus subtilis B/C NC_000964.1 - 2152896 2152960 yotJ [-]
12 Bacillus subtilis B/C NC_000964.1 + 1448599 1448715 ykvU [COG2244]

0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  GCAAACCTCCTATTTACTATTTTTATGATCTTCAGATAAG----------------------------------------
3  TGAATTTATAAAAAAAATATTGAAATATAATATTTTTTCTTGACATTAAAGAATTTTTATAGTAGAATGCGAAAGAAAGG
4  A-------------------------------------------------------------------------------
5  ACTTGTATTACTGAAAAATTATTAGTTTACTTAAAAAATACTTG------------------------------------
6  CACTTTAATTCTTTTGAAGATTAAACAAATTAGACACAAAGATATTAATCTTTATTTCTTTTCTCACCTTCTCTTTTTAT
7  AAATTAGCTATTAATTTTCCCTTTTGAATAATAAAAAACTTCATTTTTTGAAGTTTTTTTATTTTAAATATTTTTTTATA
8  TTTCATAAATTAAATATAAAATTAACTTTTTAGATTTTTCTAGAATATATTATTAAAGAAGCTGTGAAGATTTTATCTTC
9  GA------------------------------------------------------------------------------
10  TTGAACCATCTCCATTTCCTTTTAATGTATTGCAATTACATTATATGGTTTTTAAAGAAGGCAAAATAGCGAAATTACTC
11  TGTAAATAGGAACAGGATAA------------------------------------------------------------
12  GCATAGAAGAGACAATTTGTCTCAGCTGT---------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  TAGAGAAATTAACTT-----------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  TAATCTTTAAGTACTTCTCTCATTATTTCTTCTGATGTGAATGAAATACGCTTCATTTACCTTTT---------------
7  AAACAGGTCAACCGCAACCTTTCCCACCAAAATTAAAAAGATTTTCATATAAAAACATAAAAAAAGAAAAAAATTTTAAT
8  GCAGCTTCTTTTTTTGAAGTATATGCCCTTTTATCAATATTTATTACAAAAAGTAGAAAATATTCCATAAATATGTGTCA
9  --------------------------------------------------------------------------------
10  CCATACATATGGAAATTGTGTGTCGGTTAATGTCGTGATAGATGAGAAGGCAAATGGAGAGATGGATTATAGGATGG---
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------

  
0  _______________________AAGATCAATTTTATTTAGAGTAAAAATAA____AATA__TATGGAGGTTGTTTG___
1  --------------------------ATCAAATTTAGTTAGAGTAAAATTTATTTTAATT--TATTAAAGTCAAAAGAGG
2  -----------------------CATCTGTATCTAGCATAACGGAAAAATAA----AATA--TATGGAACGTTTTAACAT
3  -----------------------CTCTTGTTCAAAATATTTAACTTTTATAA----AATA--TATGGAGGTATTTAA---
4  -----------------------CTTAATAAGAATAAGAAAAGTAAAAATAA----AATA--TTTGCCAGCTATATTCGA
5  -----------------------TATTACGGAAACAATACTTGTAAAAATAA----AATA--TATATGAGAGGTACAGT-
6  -----------------------TTATTATCATGATCTTAGCTAGAAAATAA----AATA--TATGGAGGAGAAGATAAA
7  TTCAGAGAATGAAAACCGTTTCTAACTTGTGTTATAATGTGAGTATAAATAA----AAAA--TATGGAGAAATCTT----
8  AAAGTTT----------------GTGAAGAGAATACTATATAGTATAAAGAA----AATA--TATGGAGGTAACATTT--
9  -----------------------TCCAGCATTCTTATG--GGATAAAAATAA----AATA--TATTTCAGCGTAGCAAAA
10  -----------------------AATCATAAAAAACTATAGAATAAAAATAA----AATA--AGTGGAGGTTATG-----
11  -----------------------AATCGGTCTTTTATTTAGAATAAAAATAA----AATT--AGTGGAGGTATT------
12  -----------------------GCTTTTTTTCATATAAAGAGTAAAAATAA----AATAATTTTTGAACTTGTCTCATA

  
0  ________________________________________________________________________________
1  GATTGA--------------------------------------------------------------------------
2  GTGATAATTTTCTAATTTATAACTAGGTATCCCGTTTTTACTATGAGAACCCAAATACTTCCACTTCCATTGATATTAAT
3  --------------------------------------------------------------------------------
4  ATAC----------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  ACTTTAGCCAATAAACTTTTGTTTTCTACAAAAACTAGTTTAAGATCTAGAGGAATCTTAATACTGCAAGTAGTCTATAT
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  AAGTTTTAAATCA-------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  TGATGTTGGTAGTACAAGAGACAAGGAGAGACATC---------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  ACAAAATAAAAATAATTTGACTCATAAAAATCGGAATTTGTATCAAAACTAACAAAAAAAGAAAATGGCTATAAAAAATC
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  GCTAAATAAAGTATAATCTGAAATTGTTAGGAAGCTATAAATTATTAATAAAGTAATTCTCGCAGCAGAGTAAAAACATA
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  CGCTTCTATTTAATCTCTAATGTAAGCCTAATCAATAATTTTTCTTGAAAATATTAGCAAATTAAAGCTTTTAAAAGAAA
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  AAATATAAGTTTACATAAATATTTAATATCTTATAAAATTTCAATACGGATACCGTGAGTTTTTGACAATGGTTCCATCA
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  TATTAGGAAATACCCATATATATTCCGACAAATAATGACATTTTTCGATTCAGCTGTAATTACCCTTATTTTTGCCATTT
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  ATTTGAAATTTAGTTAAATTTATATTAATTTCTATGGTTAAAACTTTCTATATGAGATTAAAATCCCATTACCTCATCTT
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  GTTAAAAAATTTGCTTTTTGGTATCGTAAATAATGTTTTGTAATTTAGTGAAGCACAAATCAGTGGATGATGTGTGTCGA
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  TAATAACGTATAAACAATGTAATAAATTGAAACTAAATCAAAACTTATATAATTTATATTGCTAATCAACTGATTTTAGT
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  GTAAAAGAAAAATAATGAAACCATAGAAACGAGGTAAATG----------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  AGCAAACTCAAGCTACTAGAATAGATTCGTCTATGTCAATGCTATCTATCATTCTATTATAATTATATGAAATTAGTTAT
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  ATGAAAATTATATATCTTTTTATAAAGTAGTATGTCTAATCAAGATTAGGTTTAAACTCTTATTTTATATACTTCTTGTC
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------

  
0  _____________
1  -------------
2  -------------
3  -------------
4  -------------
5  -------------
6  AGACAAGAGATAT
7  -------------
8  -------------
9  -------------
10  -------------
11  -------------
12  -------------