BLISSBreaker Lab Intergenic Sequence ServerHome

Intergenic view options: Interleaved

NC_000964.1 Bacillus subtilis (+ 2056225 to 2056468) circular

Islands  .A.G.,,,..GCC.GCAGC,,,CAGC,,,.CG..C,,,,C.G.G.ACGG..CACCA..CC..GCAAC.G.C.CAA.CCC.
5'-   TATGTAAATTGCCTGCAGCAAACAGCAAATCGTTCAAAACTGTGTACGGTTCACCATTCCTTGCAACTGTCTCAATCCCT
       |         |         |         |         |         |         |         |    
       2056230   2056240   2056250   2056260   2056270   2056280   2056290   20563
       |         |         |         |         |         |         |         |    
3'-   ATACATTTAACGGACGTCGTTTGTCGTTTAGCAAGTTTTGACACATGCCAAGTGGTAAGGAACGTTGACAGAGTTAGGGA
Islands  A.ACA...AACGGACG.CG...G.CG...AGCAAG....GACACA.GCCAAG.GG.AAGGAACG..GACAGAG..AGGG,

  
Islands  ..G.A.AAG.A.AA.,,,,,GAC,,,.GAA.....A.C.G.GGAACGC.CAGG.AA.AAGGACAC.A.AA.AAC..AC..
5'-   TTGTATAAGTATAATAAAAAGACAAATGAATTTTTATCTGTGGAACGCTCAGGTAATAAGGACACTATAATAACTTACTT
       |         |         |         |         |         |         |         |    
  00   2056310   2056320   2056330   2056340   2056350   2056360   2056370   20563
       |         |         |         |         |         |         |         |    
3'-   AACATATTCATATTATTTTTCTGTTTACTTAAAAATAGACACCTTGCGAGTCCATTATTCCTGTGATATTATTGAATGAA
Islands  ,,CA.A..CA.A..A.....C.G...AC..,,,,,.AGACACC..GCGAG.CCA..A..CC.G.GA.A..A..GAA.G,,

  
Islands  .AAGCC,,,,CA.CC,,,.,,,,,GGC.GG..A.AA..A..A.,,,,,.CAA.AGGAAC.A.,,,.A.A.,,,GAGGGA.
5'-   TAAGCCAAAACATCCAAATAAAAAGGCTGGTTATAATTATTATAAAAATCAATAGGAACTATAAATATATAAAGAGGGAT
       |         |         |         |         |         |         |         |    
  80   2056390   2056400   2056410   2056420   2056430   2056440   2056450   20564
       |         |         |         |         |         |         |         |    
3'-   ATTCGGTTTTGTAGGTTTATTTTTCCGACCAATATTAATAATATTTTTAGTTATCCTTGATATTTATATATTTCTCCCTA
Islands  ,..CGG....G.AGG...A.....CCGACCAA.A..AA.AA.A.....AG..A.CC..GA.A...A.A.A...C.CCC.A

  
Islands  .GC.
5'-   TGCT
      
  60   
      
3'-   ACGA
Islands  ACGA

IGR  +  2056225  2056468  ()  12  yozI

Blast Hits

ID Organism Class Accession Start End Operon
0 Bacillus subtilis B/C NC_000964.1 + 2056225 2056468 yozI [-]
1 Clostridium tetani E88 B/C NC_004557.1 + 1287981 1288227 CTC01204 [COG0491]
2 Mycoplasma penetrans B/C NC_004432.1 - 383155 383473 MYPE2920 [-]
3 Methanosarcina mazei strain Goe1 A NC_003901.1 + 1979698 1980049 MM1657 [COG0639]
4 Streptococcus pneumoniae B/C NC_003028.1 - 287260 287481 SP0313 [COG0386]
5 Clostridium acetobutylicum ATCC824 B/C NC_003030.1 - 2330565 2330845 CAC2236 [COG1959]
6 Clostridium acetobutylicum ATCC824 B/C NC_003030.1 + 3073515 3073768 CAC2942 [COG1854]
7 Rickettsia conorii Malish 7 P-a NC_003103.1 + 670209 670303 RC0695 [-]
8 Vibrio vulnificus CMCP6 chromosome I P-g NC_004459.1 - 1604583 1605036 VV11634 [COG1309]
9 Staphylococcus aureus subsp. aureus N315 B/C NC_002745.1 - 2812660 2812815 thdF [COG0486]
10 Staphylococcus aureus subsp. aureus N315 B/C NC_002745.1 + 597711 597923 SA0511 [COG0451]
11 Archaeoglobus fulgidus A NC_000917.1 + 796142 796339 AF0892 [COG2085]

0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  ACTGTACTCAATGTTTTATAGTTGCTAATGGTGAGTTTCGTACCCGAGCAAAGTGTCGCTTAGGTCAATACGCAAACGTT
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------

  
0  _______________________________________TATGTAAATTGCCTGCAGCAAACAGCAAATCGTTCAAAACT
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  ----------------------------------------------------ATTTTTCACCAGTATAATTTTTCCCGGG
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  CACCTGAAATTCTCGCGTAGTGTAACACTCCGCAAAGCAATCTTTAACCCCCAAAGGAAGAAGTTGTGCCAGTGCAATAC
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------

  
0  GTGTACGGTTCACCATTCCTTGCAACTGTCTCAATCCCTTTGTAT_AAGTATAATAAA__AAGACAAAT_G__AATTTTT
1  -------------------------------------TTATAAAA-TATATCCTATAG--AATGAACAA-T--TTAAAAA
2  ----------------------------AGTTTTCTCCTTGGTTTTAATTATTATAAA--AAGTTTACT-C--CTTTTAT
3  TTTCTACTCCTCTGAACGCTCTTACCGGTCGGATTTAAATTCAGC-CAGGTCTAAAAG--CAGGCTTCG-T--CAATGTT
4  --------------------------------------------------------------------------------
5  --------------------------AATAAACCCTCCCCGAATC-AAGTATAATAAA--AAGATAAAT-TCCAATTATT
6  -------------------------------------------AT-ATATCACCCTTT--AAAATTTTT-T--AACTAAT
7  --------------------------------------------------------------------------------
8  GCTATTTACTATCACATCAATAAACGAGATCTCGATGCCAATTTA-AATAAAAGTTGC--TCAAGATAG-A--TATCAAT
9  --GGATAGGGTAGGGGAAGGAAAACATTAACCACTCAACGCATCC-CGAAGTCTTACC--TCAGACAAA-C--GTAAGAC
10  -AAAATTTAATTTGACAGTAATTAGCAATAATAAACGCTATAAAT-TACTAAAATCAATTAATACAACTAG--AATTTCC
11  --------------------------------------------------------------------------------

  
0  ATCTGTGGAACGCTCAGGTAATAAGG_ACACT___ATAATAAC__TTACTTTAAGCCAAAACATCCAAATAAAAAGGCTG
1  AATCTATTCTATAGGGTTTTATCTTT-TAATA---GAATGTCT--TTTGAAATTTAAATAATGGGATATTTATAAAATAT
2  A-----------CTCAAAAAATAATC-AATCTTACAAATTAATGTTTAATTTATTGAACAAGA--CAAATTAAAAAGGTA
3  TTTTCAGGTCAGTGCAGTCCACCCAC-TCCCA---TTTTTCCC--TGCACTTCTTCCAGAATATATGGTATAAAATTATC
4  ---------------------------------------------------------------------GTATACACTCC
5  TTAATTAATTCAATAAAATAACAAAG-CGACA---ATTCTATT--TTACAATAATTC----CATTCAAAAAAGAATGATT
6  TTAATTATAACAGCTGGGAAATAAAACAAACA---GTTATAA---TTATTAAAAAATCAAACCT--AATTATAAATACTT
7  -------------------------------------------------TAACCTTAACTTTTTATTGTAAAAATATTAA
8  ATTGACATTACTGTTCATTTATTCAC-CATAA---GTTATTGA--CCCAATGCATATGCACCATTACACTCATGGAGCTA
9  TGACCTTAGGGTTAAGACTGACCTTA-GGGTT---ATAATAAC--TTACTTTAAAATGTATTCACATCGTTGAAGGAGGC
10  ATTTACAGAAACATCAGC-AACATGT-ACA-T---GTCATA--------TATA---CAAGAAAGCGCTTTTATA------
11  ---------GCAAGGGGTAGTTTACA-ACACT---ATAAAAAC--TTACTTTTGTTTTGAATCTTGCCTTTCCCCCTCCT

  
0  GTTA_TA_ATTATTATAAAAATCA_A__T_A___GG___AA_CTA__TAA____ATATA_TAAAGAGGGATTGCT_____
1  GTTA-TA-ATTATTA-AAAGATAA-A--T-A---GG---AATCTG--TAA----AGAGG-GTGAAGCCATGAAGATATTT
2  ATTAGTA-ATAATTATTTACCTAATA--T-A---GT---G--CTT--TTA----CTCTA-TTTGTGTAGCACAAAACAAT
3  TAAT-TA-AATATTATAAAAATCA-A--T-A---GT---AA--TA--TTA----ACTCA-GGTATTTTTCGTTTAAGCAA
4  AATA-AA-CATATTGTAAAA-TCA-A--T-A---GG---AA-CTA----A----ATCTC-AAATTAGAGATTTATAGCAA
5  TATA-CA-TAAATAATAATATTAA-A--T-TTTGGA---AA-TTA--TTA----TTATA-AAAAATCTTAAAAATCTTAA
6  TTTA-TA-ATTATTTTAATAACCA-A--TTA---TT---AA-CTAAATAAGATGATATA-TAAAATCACTATTATTTAGG
7  TTTA-TATATTATTATAAAAATCA-ACTT-A---GGGTAAA-ATAG-TTG----ATATAATAAAAAAATTGTCGTA----
8  AAAG-CA-ATTATTAAAACAATCA-A--T-A---GG---AA-CAG--CTA----AGCCG-TTCCCGAGCTCGGTACCCCA
9  GAGT-AG-CAAT--------------------------------------------------------------------
10  -TTA-TA-ATTATTATGAAAATGA-A--T-A---TT---AT-GTC--CGC----TTGTG-ACGGACTATAGCTATATAGA
11  CGAG-GT-CATCAACCTTTCTGAA-G--T-A---CA---GA-CCC--TCG----CACAT-AGAGCGGATTTTCCTTCCCA

  
0  ________________________________________________________________________________
1  TTACGTATGCATCCAAAGAATCGCCTATCCTCTGTGCAACTATAAAATTAATATTGTACAGAGGAGTGTATATTAA----
2  AAAACAAATATGTTATTTATAAAACTTTAATATAGTTTATATTAGCAAGTGAATCTTACCTACAACTTTATGTTAAATTT
3  AATTGATTAAAATAAATAGAACCGGTTAAAACAGGAAGAGCTGGTCAACACAAAAATACTGGTCAAAATACAGGATTGAT
4  CTAAGTAAACCGGTTTAATTAAATCATACCATTTTTAAAGTTATTTGTAAACGGTTTCTATCATATTGAAGGCTTATTCT
5  AAATTTAAAAAGAAAATTCTACTTGACAAGTAAAATTTTTAGTCGTAATATTAAAACATAGTAATTCAATAAAAAAACTA
6  AAATCTATTATCATCCCTTTTTATAAAATTTAAATTGTAGTATCATAGATTATAAGCTTTATTAATTTATAGGAGGTCAC
7  --------------------------------------------------------------------------------
8  ACTCATTGGTAAGGAAACAACCTATGGACTCAATCGCAAAGAGACCGCGAACTCGCTTATCTCCGCTAAAACGTAAACAG
9  --------------------------------------------------------------------------------
10  AGAGACAAAGGAGATATTTCT-----------------------------------------------------------
11  CTTTTAAAACGCTAACCTTCAAATTTGAAATTACTGGAGAAAGACTATATACCTCAATACATAACGACTAGAG-------

  
0  __________________________________________________________________________
1  --------------------------------------------------------------------------
2  ATTTTTACTCAATATTTTGAAGATACTTTTATATACTTTAAAGTATTGGTTTAAAAAATATAATT---------
3  CAAATAAGCAGAATTTAAGAAAAGTGAGGGATGTCAT-------------------------------------
4  TCAACAATATCTTCCATCCGACTCGACGAAAAAAGTAAAAACTGTTACAATGTAGAAAAAGAAAAGAGGCCCTC
5  TAAATAGGTGAAATGCAT--------------------------------------------------------
6  TATT----------------------------------------------------------------------
7  --------------------------------------------------------------------------
8  CAGCTC--------------------------------------------------------------------
9  --------------------------------------------------------------------------
10  --------------------------------------------------------------------------
11  --------------------------------------------------------------------------

Complementary Intergenic Regions

IGR  -   2056225  2056468  ()  11  yozH