BLISSBreaker Lab Intergenic Sequence ServerHome

Intergenic view options: Interleaved

NC_000964.1 Bacillus subtilis (+ 20557 to 20877) circular

Islands  AACAG..G,,,GC.G.GG,,,C..A.AG.ACA..A.AAGCAC,,,.,,,GA.CG,,,,GCG..GA.AGGAAC.AG.AGGG
5'-   AACAGTTGAAAGCTGTGGAAACTTATAGTACATTATAAGCACAAATAAAGATCGAAAAGCGTTGATAGGAACTAGTAGGG
     |         |         |         |         |         |         |         |      
     20560     20570     20580     20590     20600     20610     20620     20630  
     |         |         |         |         |         |         |         |      
3'-   TTGTCAACTTTCGACACCTTTGAATATCATGTAATATTCGTGTTTATTTCTAGCTTTTCGCAACTATCCTTGATCATCCC
Islands  ..G.CAAC...CGACACC...GAA.A.CA.G.AA.A..CG.G...A...C.AGC....CGCAAC.A.CC..GA.CA.CCC

  
Islands  AGCC.C.C...C.AAGAGAGCCGA.GG..GG.GCGAA.CGG.G,,,GA.GC.G.C.GAA.CCA.CC..GAGCG,,,.GC.
5'-   AGCCTCTCTTTCTAAGAGAGCCGATGGTTGGTGCGAATCGGTGAAAGATGCTGTCTGAATCCATCCTTGAGCGAAATGCT
     |         |         |         |         |         |         |         |      
     20640     20650     20660     20670     20680     20690     20700     20710  
     |         |         |         |         |         |         |         |      
3'-   TCGGAGAGAAAGATTCTCTCGGCTACCAACCACGCTTAGCCACTTTCTACGACAGACTTAGGTAGGAACTCGCTTTACGA
Islands  .CGGAGAG,,,GA..C.C.CGGC.ACCAACCACGC..AGCCAC...C.ACGACAGAC..AGG.AGGAAC.CGC...ACGA

  
Islands  GAAGCGAG.AGGCA...ACGGGA.AACCG..A.G...G,,,G.GG,,,,CGAG.C...GA...G....CAA.CAGGG.GG
5'-   GAAGCGAGTAGGCATTTACGGGATAACCGTTATGTTTGAAAGTGGAAAACGAGTCTTTGATTTGTTTTCAATCAGGGTGG
     |         |         |         |         |         |         |         |      
     20720     20730     20740     20750     20760     20770     20780     20790  
     |         |         |         |         |         |         |         |      
3'-   CTTCGCTCATCCGTAAATGCCCTATTGGCAATACAAACTTTCACCTTTTGCTCAGAAACTAAACAAAAGTTAGTCCCACC
Islands  C..CGC.CA.CCG.,,,.GCCC.A..GGCAA.AC,,,C...CACC....GC.CAG,,,C.,,,C,,,,G..AG.CCCACC

  
Term (100.00)%  --------GAGCTCTCGTCCCTTTATGGGGATGAGGGCTC----------------------------------------
Islands  CAACGCGAGAGC.C.CG.CCC...A.GGGGA.GAGGGC.C.....A....CGA.,,,.CAA.,,,,,,,GGAG.G...CG
5'-   CAACGCGAGAGCTCTCGTCCCTTTATGGGGATGAGGGCTCTTTTTATTTTCGATAAATCAATAAAAAAAGGAGTGTTTCG
     |         |         |         |         |         |         |         |      
     20800     20810     20820     20830     20840     20850     20860     20870  
     |         |         |         |         |         |         |         |      
3'-   GTTGCGCTCTCGAGAGCAGGGAAATACCCCTACTCCCGAGAAAAATAAAAGCTATTTAGTTATTTTTTTCCTCACAAAGC
Islands  G..GCGC.C.CGAGAGCAGGG,,,.ACCCC.AC.CCCGAG,,,,,.,,,,GC.A...AG..A.......CC.CAC,,,GC

  
Islands  C
5'-   C
   
     
   
3'-   G
Islands  G

IGR  +  20557  20877  ()  20  serS

Blast Hits

ID Organism Class Accession Start End Operon
0 Bacillus subtilis B/C NC_000964.1 + 20557 20877 serS [COG0172]
1 Shigella flexneri 2a str. 301 P-g NC_004337.1 + 3809437 3809950 shiB [-]
2 Listeria innocua Clip11262 B/C NC_003212.1 + 1191579 1191943 pheS pheT [COG0016 COG0073|COG0072]
3 Shigella flexneri 2a str. 301 P-g NC_004337.1 + 3054000 3054451 SF2965 [COG1112]
4 Oceanobacillus iheyensis B/C NC_004193.1 - 560092 560817 OB0527 OB0526 OB0525 OB0524 OB0523 OB0522 OB0521 [COG0147 COG0512 COG0547 COG0134 COG0135 COG0133 COG0159]
5 Oceanobacillus iheyensis B/C NC_004193.1 + 15118 15502 OB0012 [COG0172]
6 Clostridium tetani E88 B/C NC_004557.1 - 102352 102882 CTC00143 [COG0017]
7 Salmonella typhimurium LT2 P-g NC_003197.1 + 4731602 4731962 STM4489 [COG1112]
8 Listeria monocytogenes strain EGD B/C NC_003210.1 - 2823196 2823529 serS lmo2746 [COG0172 COG3070]
9 Listeria monocytogenes strain EGD B/C NC_003210.1 + 1240682 1241047 pheS pheT [COG0016 COG0073|COG0072]
10 Listeria innocua Clip11262 B/C NC_003212.1 - 2904276 2904610 serS lin2889 [COG0172 COG3070]
11 Listeria innocua Clip11262 B/C NC_003212.1 - 1864238 1864636 lin1851 lin1850 lin1849 [COG0765 COG1126 COG0834]
12 Clostridium perfringens B/C NC_003366.1 + 20917 21261 serS [COG0172]
13 Thermoanaerobacter tengcongensis strain MB4T B/C NC_003869.1 + 16971 17654 IlvH IlvC LeuC LeuC LeuD LeuB IlvD IlvB [COG0440 COG0059 COG0119 COG0065 COG0066 COG0473 COG0129 COG0028]
14 Clostridium tetani E88 B/C NC_004557.1 - 29964 30263 CTC00081 [COG0172]
15 Bacillus subtilis B/C NC_000964.1 - 3104125 3104550 leuS [COG0495]
16 Bacillus halodurans B/C NC_002570.1 + 34409 34677 serS [COG0172]
17 Bacillus subtilis B/C NC_000964.1 - 2800081 2800410 alaS [COG0013]
18 Clostridium acetobutylicum ATCC824 B/C NC_003030.1 + 1387191 1387526 pbpA [COG0768]
19 Clostridium acetobutylicum ATCC824 B/C NC_003030.1 - 1752789 1753491 brnQ [COG1114]

0  ________________________________________________________________________________
1  ATATTGCATTAGTGTAACTTTAAAACAAGTAATAATTTATTATCCAATAATAACACTGTGTTCCTTCCCCAGGTGATTAC
2  AAAGAGATAATCTCTCCAACTAATATGGGGAGATTATTTTTTAGCTTGAATCTTTCGT----------------------
3  TAAGCAGTCCGGGCAATCAGCCCGGACTGCTTTAACTAATTATTTTTCTTTGTAAATGATGACGAAGATTGATGTTTCTG
4  GCGAGAATGCATTTATCAATTGGTGGGTATCTTGATTAAATAAGTAGCCCTTAAAAAAACTTTTAAAAAAGTTATTGACA
5  ATTTCCGGTCTTGAATAAAAACTAATTAGGCAATCTTATTAACTTGTGTATA----------------------------
6  TTTATTCTCCTCCTTATAAATAGGTTTTTAAATTAAATCTTAAAGTAGTTTATTATGTCTTTATACAGCCATAATTTAAG
7  TACGTTCGAGTCCGTAGTGCGCAAATGCGTCT------------------------------------------------
8  A-------------------------------------------------------------------------------
9  AAAAGAAATAATCTCTCCAACCAATATGGAGAGATTATTTTTTAGCTTGAATCTTTCCT---------------------
10  A-------------------------------------------------------------------------------
11  CAAAAAGACAAGCAAACTACTAACTGTTTGCTTGTCTTTTTTTGTTTAATTAAA--------------------------
12  GAATTGACA-----------------------------------------------------------------------
13  TTTAGGTACCTCCTGTTTATTTTGATAATTCGAGGTAAGTTCTTAAACTTACACTCTGTATTTTATCAGGAGGTACTTAT
14  --------------------------------------------------------------------------------
15  TTGTCCTCAATCTCCGCCCGTTCAGGGTACATTCCCA-------------------------------------------
16  --------------------------------------------------------------------------------
17  --------------------------------------------------------------------------------
18  --------------------------------------------------------------------------------
19  AAACATCATCCTAACAAAAAATACATCTCAAAACATCATACAACAAAATCAGTATTTTGTAATGTAATCTCCTTCTAATT

  
0  ________________________________________________________________________________
1  CCTGGGGTTATTTTCTGAAAGTTTCCTTTGCAAAAGGATAGCGTTGTAAATTACTTTAACGAATTACTCCATGAACTCAT
2  --------------------------------------------------------------------------------
3  ACAAGTTACTCCGGCTTCCATTAAAGTCCCTTCGTCACGTTCT-------------------------------------
4  ATTACTTGTCCCATCCGGTAAGATAAATTCAACAAATTGATGAATCGGCACTGACGAAGAAGAGTACTTAATAAAAACCC
5  --------------------------------------------------------------------------------
6  ATTATATATTAAATTTTAAGTTTTGAATAGAAGAATTTTTTTACTTTTTTCGACATACTTTATATTGGCCTGTACAGCCT
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  TTTTTCAAAGTCCATTCTCCCTTATTTTTTATTCATTACAGGAATGCTCCTTTCTGGAACTTTCTGATTTTAATCATAAT
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------
16  --------------------------------------------------------------------------------
17  --------------------------------------------------------------------------------
18  --------------------------------------------------------------------------------
19  TTATAGTAAATAGTAAATTTTCATCATGTATCCTTAAGAAATCTATTAATTTCTTCAATTTGCTTAATATCATTTCTATG

  
0  ________________________________________________________________________________
1  TAAAGTTCTTTCGTAATACTTTATC-------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  TAAAGAGAGCTGATGGTTGGTGAGAATCAGCGGGATATTTTATTAAGGAATGGACTTCTGAGCTCCAAACCGAACCGTTA
5  --------------------------------------------------------------------------------
6  TTAATACTAGTCATTGACATTAAATTTTTTAACTAT--------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  ACATATCTTTTTAAAAACCAAATTTAGCAAAAATATTTAAGCTACATGTGATTAAAGCAATTTTTAATGATAGTTAAAAA
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------
16  --------------------------------------------------------------------------------
17  --------------------------------------------------------------------------------
18  --------------------------------------------------------------------------------
19  TTTTAAAATTCCCTACACATTCATAAGGCTTTTAAGTTTGTAATATTGTATTATTACTTCTTTATTAATATTTAGCGTTA

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  ACTGAAGTAGGCCTTGGCGAATTCGTCTCTCGTTATCGAGACTAAGTAGATAATTTATTATCTTACTTTCAAAGTGAGCT
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  ATAAGCAATTTTTTTGATACCTTTTTAAAATTTTTTAGTAAATGTAAACGATGGATTTTTGGAAATTTACAAACAATTTA
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------
16  --------------------------------------------------------------------------------
17  --------------------------------------------------------------------------------
18  --------------------------------------------------------------------------------
19  TTTATAGGTATTTTAATTACTATTTATTGATTTTTTAATTATTTTGATTGTATTTATGCTTTATCATTAATATTATGATA

  
0  ________________________________________________________________________AACAGTTG
1  ------------------------------------------------------------------------GTCAAACA
2  ------------------------------------------------------------------------AGAACCAT
3  ------------------------------------------------------------------------TCAGGCTA
4  GAACTTCAGCTAATAAAGGTGGTACCACGGTCCCTCGTCCTTTTTAGGATTAGGGGCTTTTTTGTATTCATACAACTAAA
5  ------------------------------------------------------------------------AGGTATTG
6  ------------------------------------------------------------------------TATAATTA
7  ------------------------------------------------------------------------CCAGCAAC
8  ------------------------------------------------------------------------GATTTGCT
9  ------------------------------------------------------------------------AGAACCAT
10  ------------------------------------------------------------------------GATTTGCT
11  ------------------------------------------------------------------------AATGGTTG
12  ------------------------------------------------------------------------AAAAGCAA
13  GTTGACTAAAGTAAAAGAGGCTGATAAAAT------------------------------------------AACAAGT-
14  ------------------------------------------------------------------------------TT
15  ------------------------------------------------------------------------TTGTATAC
16  --------------------------------------------------------------------------------
17  --------------------------------------------------------------------------------
18  --------------------------------------------------------------------------------
19  TTCATAAATTATTTACATTTAAAAAACTTTATGGTATAAGATATATAAATTCTAT-----------------GAAAGAAA

  
0  AAAGCTGTGGAAACTTATAGTACATTA_TAA_GCACAAATAAAGATCGAAA_AGCGTT__GAT_AGGA_ACTA_______
1  CGTTATAGCTGGCATCAAAAACCACAG-ATT-TACCCTGCCAGCGGGTAAT-CCCCTC--CTC-TGGC-GTTT-------
2  ACTATAATAGAAACT-ATC-TAAATAAGTAA-AGACAATGAAAGAGCCAAGTAGCATA--GTG-AGTC-TGTA-------
3  TTTATGACTGTGATTAGCACCAGGAAT-ATA-TGGTTTCCATGAGAGCAGG-TAATAA--CCC-CCGG-TGTT-------
4  TAATTGCAAAATCATTGAGTAAGAGGA-GTA-AATATTCAGGAATCGTTAC-AGAGAG--CTA-GAGG-TTGG-------
5  CAATGTTGGTAAAAATTGATTATGATA-TA---CCATAATAAACGTAGAAA-TGTAAC--GAT-AGGA-AATA-------
6  ATAAACATAGATATTTATTTTCAATTA-TTA-TGAAATTTAAAGA---------CTAT--GAT-AGGA-AG-A-------
7  GTGAACTGGTCGACGGAACATTCGACA-GCG-TTATTTTCTGAGCTTACAG-GTTTTC--CAA-TATT-GCAC-------
8  TGTAATTTAAGCAGATATGCGATAGAA-TAA-CTTTAAATTAATA-CGAAA-AGCGAA--GAC-AAGA-AGTA-------
9  ACTATAATAGAAACT-ATC-TAAATAACTAA-AGACAATGAAAGAGCCAAGTAGCATA--GTG-AGTC-TGTA-------
10  TGTAATTTAAGCAGATATGCGATAGAA-TAA-CTTTAAATTAATA-CGAAA-AGCGAA--GAC-AAGA-AGTA-------
11  ACTCTATCGCTTTATCGTGGTAGAGTA-TTA-GCAAGAAGAAGTA----AA-AGCGAT--GAA-CAGA-ACAA-------
12  ATATTAAAGTATATTTTTTATATATTA-TGT-TTA-AATTAATAAT---AA-ACCGTT--GATCAGG---CTA-------
13  AACTCTCATGAAAATT----TACAGTT-TCA-GAATGA-TAATGAA-GAAA-AGCGAT--GA--AGGAGAGGG-------
14  TGACAATAGTAAACTAAAAATATATAA-TAAAGGTTAATTTGATATTGAAA-CCTATG--AAA-AGG---CTA-------
15  AAACCTGCTTGCACTTAT-GAACAGAA-TTC-TATAAAATACAGTTAGATT-ACGGTTGCGAT-AAGA-ACAATGAAGAG
16  -----------------------------------------------ACAA-TGCGTT--GAG-AGGA-ACTA-------
17  --------CATCGGCGTGCCGCTTGTC-TAT-AATTTCTCGTAGAATACAT-ACGAAT--CTC-GAGT-GACG-------
18  --------------------------------------------------------------------------------
19  AGAGTAAGCTATATATCTGTTCTAAAT-ATT-TACTCTAAAGTAAATACCA-TAAGAG--AGC-TAAC-GCTT-------

  
0  _____GT___AGGGAGCCT__CTCTTTCTA__A_GAGAGCCGATGGT__TGGTGCGA_AT___CGGTGA_AAGAT_GCTG
1  -----TC---GGTTGAACT--GGTATCCCC--G-TCCAACACAGGCA--GCCATTAT-AA---ACAGTA-AAAAA-TTGT
2  ------T---AGGGAGAAGTGGTCATAGAC--T-GAAAGCCACTT-T--ACAAACGA-AT---TTGCGA-ACATT-TCAC
3  -----TT---CGGCTGCTC--TGGTATCCC--C-GTCCAACACAGGT--AGTTATTA-TA---AACGGT-AAAAA-ATGT
4  -----TG---AAATTCTAG--CACGCCGAA--G-AGTATTGAATGGA--CTTACGAG-AG---TTTTCT-TGAAG-CATT
5  -----GT---AGTGATAGT--TTGTT-CTAT-A-GAGAGTCAATGGC--TGGTGGAA-ATTGACGTTCA-ACTAT-AATG
6  -----GT---AGATAAAGG--AGGTATCCA--AAGCGAGCCAGTGAC---GGTGCAAGAC---TGGTGT-TACAT-CTTT
7  -----TG---AACGCTATC--CAGTCGGGT--T-CACGGGCTTCTGG--AGCGAGCT-GC---GCAGCC-GATAA-TCCT
8  -----GT---AATAAGGTA--GAGTTTCTA--AAGAGAGCCAGTGGT--TGGTGTGA-AC---TGGTGA-AGTTT-CCT-
9  ------T---AGGGAGAAGTGGTCATAGAC--T-GAAAGCCACTT-T--ACAAACGA-AT---TTGTGA-ACATT-TCAC
10  -----GT---AATGAGGTA--GAATTTCTA--AAGAGAGCCAGTGGT--TGGTGCGA-AC---TGGTGA-AGTTT-CCT-
11  -----GT---AGAGCGTCA--TTCTTTTTA--A-GAGAGTCCTTGGT--TGGTGTGA-AA---GGAT-A-AAGATAGCGT
12  -----GT---AATGTTA-T--ATATTGCTTTCA-GAGAGCTAGTGGTTTTGGTGTGA-AC---TAGTAC-AATAT---TT
13  -----GT---ATGTG--CT--AAGGCTC-A--A-GAGAGCCGGTGGT--TGGTGCGA-AC---CGGTGCCAAGGC-ACAT
14  -----GT---AGCAATATA--AAAGTCTTT--A-GAGATTCAGTGGT--TGGTGAGA-AC---TGAAAC-TATTT-ATTT
15  GAGCAGT---AAGAAACAG--ATATTGTTGC-A-GAGAGTTGACGGC--TGGTGAAA-GT---CAATCA-AGTTT-GTT-
16  -----GTAATAGGAATACT---TCTGT-TC--A-GAGAGCTAGTGGA--CGGTGCGA-AC---TAGCCA-GAGGT-GCC-
17  -----GA---TCTGAGTAC--GCCGAAGCC--C-TGTTAAAGAGAGA--AGCTCCAT-AA---GCTGAA-AGGAG-CTTT
18  --------------------------------------------------------------------------------
19  -----GG---TGAAAGTTA--GTGTTCAGA--A-TATATCCGAAAAT--CCTTCTTG-AG---AAGTGA-AACTG-AAAC

  
0  _TC_T_GAA_TC_CATCCTTGA_GC________GAAATGCTGAAGC______GA________GTAGGC________ATT_
1  -AT-T-CGC-TG-TTATGAAAT-CA--------ATAGTCCTGACGT------AC--------TGTTGA--------ATG-
2  CTC-T-GGAGTC-GCCCCCCGA-GA--------AGCACGTT-ATGT------GT--------GAAGGT--------GGT-
3  -AT-T-CAC-TG-TTATGAAAT-CA--------ATAGTCCTGACGT------AC--------TGTTTA--------ATG-
4  -AG-A-CTA-GT-AGGGAAAAA-CG--------GGTTTCCGCCGTT------AT--------ACGGAT--------AGG-
5  -------AA-TC-CATCCTTGA-AC--------ATGCTTATGAAAG------AATTGTTTCTGTAAGT--------AAG-
6  -AT-T-GAA-GAACATCCTTGA-GTTTCTAACTGAAATCTATAAGA------AA--------GTAGGCTTAGAGGTATTC
7  -CT-A-CTG-CT-TCAGTTATA-AC--------GCTATTATGTGAC------AT--------GCAGCA--------TGA-
8  -TA-T-GAA-TC-CATCTTGGA-GT--------GAGTGGTGGAA---------A--------GCATGG--------TTT-
9  CTC-T-GGAGTCGCCGCCGGGAAGC--------ACAA----GTAGT------GT--------GAAGGT--------GGT-
10  -TA-T-GAA-TC-CATCTTGGA-GT--------GAG-TGGTGGAAA------GC--------ATAGT----------TT-
11  -TA-TCGAA-CA-CATCTCGGA-GCT-------GGTTTACTGAAGCATAAGTGA--------GTAGGT--------GAA-
12  -TCAT-GAA-TC-CACCTGTGA-GG--------GA----CTGTGAT------GA--------GCAG--------------
13  -AT-T-AGA-TC-GCTC-TGGA-GCT-------GTATAGCTGAACG------GT--------CCTTTG--------AAA-
14  -TG-T-GAA-TC-CACCTTGGA-GG--------GA--TTGTGAT---------A--------ATAAAC--------AGT-
15  -TC-C-GAA-CT-CACCTCAGA-GT------------TGCAGCGGT------GA--------AAAGCC--------GCT-
16  -TA-T-GAA-TC-CATCCTTGA-GT--------GGAATGCTGAACA------TAA-------GTAGGC--------GTT-
17  -AT-C-AGA-AG-ATCGGAGGA-AG--------CTAATCCTGAGTG------CA--------GTTAAT--------CAC-
18  --------------------------------------------------------------------------------
19  -TT-A-TAA-TT-TAAGTAAGT-TT--------TACCGGATTTCCA------CC--------GTTAAA--------AAG-

  
0  __TACGGGA_T_A_A__CCGTTAT_G__T__TTGAAAGTGGA__AA____AC______GA_GTC_TT__TGATTTGT__T
1  --TGCTTGT-G-T-T--CTGAACC-T--C--GTACAACCAGT--AC----AT------TT-GAT-AT--CGAATTAT--A
2  --CCGGTTACT-A-AG-CCGTTAT-CGAA--TTTTGAGTGGG--AA-----C------AA-AT---------TTTGT--T
3  --AGCTTGT-G-T-T--CTGAACC-T--T--GTACAACCAGT--TC----AT------TT-GAT-AT--CGAATTAT--A
4  --ATATCGG-A-G-C--ATAACTT-C--T--CCCGTATCTGA--AA----AC------GA-GTT-GGGAAGATTTCT--T
5  --CACGGCA-G-ACA--CCGTTAA-A--A--GTTA--GTAGA--GC----CG------GAAGGT-AT--TAATATGC--C
6  AGTACCTTA-T-A-A--CTG--AT-G--C--ATGAATTTATA--TAATTCAT------GC-TTA-TT--TGAGTGGTCAT
7  --TATGGTC-G-T-T--TTCTGAA-C--T--CCGTATAACCT--GA----GT------AT-TTG-TA--TTGAAGCG--T
8  --TGCGAGT-A-A-A--TCATTCC-G--G--CTGGGTCCGTT--AA----ACCTAAATGA-AGC-TG--GGGATTTT--T
9  --CCGGTTACT-A-AG-CCGTTAT-C--GAATTATGAGTGGG--AA-----C------AA-TTT-TT--TG--TTCT--T
10  --TGCGAGT-A-A-A--TCATTCC-G--G--CTGGGTCCGTT--AA----ACCTAAATGA-AGC-TG--GGGATTTT--T
11  --CTCGGGA-A-A-AGCCCGTTATAG--C--TTGTTAGTCTC--GA----AC------TA-ACT-GA--GGCTGGTG--C
12  --TACGGAA-TTA-A--CCGTTAAAG--T--TTTTAAGAGGATAAA----AT------CT-TTT-TT--TGATTT----T
13  --AGGACTC-A-T-T--AGGCTAT-A--C--CGGGGGTGCCC--GT----TA------CA-GTT-CA--AGTTTGCA--A
14  ---ACGTTA-A-G-C--ACGTTAA-G--C--TT--ATTTTAA--AG----AG------GA-TTAATT--TTACAAGT--T
15  --GACGC-A-T-A-A--CTGCG---------TTAAAAGTATC--AA----GT------GA-GTG-CG--GCGTATGC--C
16  --TCCGGTTCT-G-G--CCGTTAT-C--C--AGATGAGTGGT--CA----GC------G-----------GTATAGC--T
17  --TGCCGCT-T-A-T--CCTGCGT-T--A--CAGGGTTAAAG--GT----GA------CG-GGC-GC--ATGAATGC--C
18  --------------------------------------------------------------------------------
19  --AAAGCGT-A-T-C--AATAGCG-T--A--CGTGTTTTGAG--CT----GC------CA-TAA-AT--TAATTATT--T

  
0  T_T______C__AATCAGGGTGGCAACGCG_AG___A_________G______CTCTCGTCC_CTT___TA_________
1  A-A------C--AAAACATTGCATCCAACT-TT---T---------T------TAATATGGA-CAA---TA---------
2  C-T------T--ATT-AGGGTGGTACCGCG-AG---A---------A------GTCTCGTCC-CTT---TG---------
3  A-A------C--AAAACATTGCATCCAACT-TT---T---------T------CAATATGGA-CAA---TA---------
4  T-C------C--AAATGAGGTGGCACCGCG-GT---T---------C------CTATCGTCCTCTA---TAAGCACACTA
5  T-T------C--AATCAGGGTGGCAACGCG-GG---A---------ATTAATACTCTCGTCC-CTT---TT---------
6  T-TAGA---C--AAATTGGGTGGTACCGCG-AAGTCA---------GT-----CTTTCGTCC-CTT---TA---------
7  G-A------A--CAAAACATTGCAGCCAGC-CT---T---------T------CAACGTGGA-CAA---TA---------
8  T-TAGATCCC--AATAAGGGTGGCAACGCG-GTT--A---------A------CTCTCGTCC-CTT---TCC--------
9  -------------ATTAGGGTGGTACCGCG-AG---A---------A------GTCTCGTCC-CTT---TG---------
10  T-TAAGTCCC--AATAAGGGTGGCAACGCG-GTT--A---------A------CTCTCGTCC-CTT---TCC--------
11  T-G------T--GAAGTATCAGTAAATTGA-GG---T---------G------GAACCACGT-GAA---TA---------
12  A-T------C--AATTAGGGTGGCAACGCGGAG---T---------C------TTTTCGTCC-CTT---TT---------
13  A-A------A--CTTGGTGAGGCTATTTGC-CG---T---------G------AGGCAATAG-CGA---AG---------
14  AAT------C--AATTAGGGTGGCAACGCG--G---A---------GT-----CTTTCGTCC-CTT---TA---------
15  G-C------GCTAACGAGGGTGGTACCGCG-GG---AAAACGAAAGT------CTCTCGTCC-CTT---TT---------
16  G-G------C--AACAAGGGTGGCAACGCG-GG---T---------G------CTCTCGTCC-CTTTTCTT---------
17  C-G------T--AATCAGGGTGGTACCGCG-AG---ACA-------G------CTCTCGTCC-CTG---TG---------
18  --------------TTGAAAAGAGTCTTCA-TA---T---------A------GTAATTTTT-AGA---TT---------
19  A-T------GG-AATCAGGGTGGTAACGCG-AGT--A---------T------AACTCGTCC-CTT---TA---------

  
0  __T___GGGGATG_AGGG_C__TCTTTT___T____A___TT__TTCGATAAATCAATAAAAAAAGGAGTGTTTCGC___
1  --G---TTGTCCA-TACG-G--TGGTTT---T----A---TA--TTCGATAAATCAATGGATTTCATTGAGTCACAGGAC
2  --T---GG--AT--AGAG-C--T-TTTT---T----A---TT--TTGTCTAAA-------AAGAAGGAGTGAACGGT---
3  --G---CTGTCCA-TACG-G--TGATTT---T----A---TA--TTCGATAAATCAATGGATTTCATTGAGTCACAGGAC
4  GCT---GTGTTTATAGGG-G--ACTTTT---T----T---TA--TTCAATTACTT--TTAAATAAGGAGTCGAAGAC---
5  --TAC-AGGGACG-GGAG-T--TTTTTG---T----T---TTGATTTGTTATAT--ATTAAAGGAGGAATTAGAAC----
6  --T---AAGGATG-AGGG-G---CTTTT---T----A---TT--TT----AACTTAATATAAGGAGGATTAAC-------
7  --G---TTATTCA-TACG-G--TGATTT---T----A---TA--TTCGATAAATCAATGGGTTTCATTGAAACATAGGAC
8  --T---GTTAATT-CGGG-A--AAGTACGG-G----A---GT--TTTTATATGGAAAAAAATAAAGGAGGAGTTAGC---
9  --T---GG--AT--AGAG-C--T-TTTT---T----A---TT--TTGTCTAAA-------AAGAAGGAGTGAACGGT---
10  --T---GTTAATT-CGGG-A--AAGTAC---G----GGAGTT--TTTTATATGGAAAAAAATAAAGGAGGAGTTAGC---
11  --G---TATTCTC-GTCC-T--CTTGGC---A----A---TT--TTGTGCCAAGTGCGACGAGATTTTTTTATGTAAAAA
12  --TATAGGGAATG-GAGG-C--TCCTTT---TTTATA---TA--TTTTTTTAGTTAATAAAATTTTAAATATAAATAAGG
13  --A---CAGGTGG-TACC-G--CGTGGA---T----G---AA--AAGTCCCCGCCCTGTTACGCAGGGCGGGTAAAGTTT
14  --A---GGGCACG-AGGGGC--TTTTTT---T----A---AT--ATAAAAATATAGGAGGGTACATAT------------
15  --T---GGG-ATG-AGGG-AGTTTTTTT---T----A---GT--TTGGGAATATTCTGAATATAATCCTCTCCTTCCCGT
16  --T---AGGGATG-AGAG-C--TTTTTTGTAT----A---TA--AACATTGATTCGATACCAAAGGAGGCGTTTTAT---
17  --T---AAACGTT-GGTT-T--GCATAG---G----G---GG--AGGGCTTTTTTGCTGTCACTGAAGAGAATTTCGATT
18  --A---CTATATG-AGGG-C--TCTTTT---T----A---TT--AAAAGGCGGAAATTATAACGAATAACTAAATAAAAC
19  --T---TGGGACG-GG------TTTTTT---T----A---TT--AT--ATAAATTT-TAAAATTACAATTTTGGGAGGCA

  
0  ________________________________________________________________________________
1  TGGTA---------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  TGGTA---------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  TGGTA---------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  AGGAGCGAAACAAT------------------------------------------------------------------
12  TTCTTGAAAGGAGA------------------------------------------------------------------
13  TTAAGGGGGGTGATGCTTT-------------------------------------------------------------
14  --------------------------------------------------------------------------------
15  CAATACTTGAACCATACACGCCGTATTCAATCAGAAGGAGGTTTTTACT-------------------------------
16  --------------------------------------------------------------------------------
17  TTTATAGAGGAGGAAATACA------------------------------------------------------------
18  TATATAGTTAAATATTGACATAATATTTAATTAAAAGTATAATTTTTTATGATACTTAAAAATGTTTATAAATGACATTT
19  TAATAACA------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------
16  --------------------------------------------------------------------------------
17  --------------------------------------------------------------------------------
18  AATTTAAAGAAAAGTATTAGTTCAGGAATCTCGCTTAACGCTCCATATGGTGTATTAATTTAGTATTTATTTACGTACTT
19  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------
16  --------------------------------------------------------------------------------
17  --------------------------------------------------------------------------------
18  CAATTTATAATTTTATTTTATATATGTGGATTTTAGCTGAGAGAGATAATAAAAATAAGATTGTAAAGAGGGTAGTAAAG
19  --------------------------------------------------------------------------------

  
0  ___
1  ---
2  ---
3  ---
4  ---
5  ---
6  ---
7  ---
8  ---
9  ---
10  ---
11  ---
12  ---
13  ---
14  ---
15  ---
16  ---
17  ---
18  GTT
19  ---