BLISSBreaker Lab Intergenic Sequence ServerHome

Intergenic view options: Interleaved

NC_000964.1 Bacillus subtilis (+ 1774981 to 1775112) circular

Term (99.75)%  ----GGGACTAGGGGAGACAGTACCCCCAAGTCTC---------------------------------------------
Islands  ,,,,GGGAC.AGGGGAGACAG.ACCCCCAAG.C.C......A.A..GA.A.A.CA..C....A.CAC.....G...A.G.
5'-   AAAAGGGACTAGGGGAGACAGTACCCCCAAGTCTCTTTTTTATATTGATATATCATTCTTTTATCACTTTTTGTTTATGT
           |         |         |         |         |         |         |         |
           1774990   1775000   1775010   1775020   1775030   1775040   1775050   1
           |         |         |         |         |         |         |         |
3'-   TTTTCCCTGATCCCCTCTGTCATGGGGGTTCAGAGAAAAAATATAACTATATAGTAAGAAAATAGTGAAAAACAAATACA
Islands  ....CCC.GA.CCCC.C.G.CA.GGGGG..CAGAG,,,,,,.A.AAC.A.A.AG.AAG,,,,.AG.G,,,,,C,,,.ACA
Term (0.18)%  ------CTGATCCCCTCTGTCATGGGGGTTCAG-----------------------------------------------

  
Islands  .A.AA.GAAGG..GG,,,,.AG,,,CG..GA.ACA.AG.GAGGGA..,,,CA
5'-   TATAATGAAGGTTGGAAAATAGAAACGTTGATACATAGTGAGGGATTAAACA
           |         |         |         |         |  
  775060   1775070   1775080   1775090   1775100   1775110   
           |         |         |         |         |  
3'-   ATATTACTTCCAACCTTTTATCTTTGCAACTATGTATCACTCCCTAATTTGT
Islands  A.A..AC..CCAACC....A.C...GCAAC.A.G.A.CAC.CCC.AA...G.

IGR  +  1774981  1775112  ()  12  mutS mutL

Blast Hits

ID Organism Class Accession Start End Operon
0 Bacillus subtilis B/C NC_000964.1 + 1774981 1775112 mutS mutL [COG0249 COG0323]
1 Streptococcus agalactiae B/C NC_004116.1 - 1542516 1542596 SAG1528 [COG0147|COG0115]
2 Clostridium tetani E88 B/C NC_004557.1 - 2276649 2277252 CTC02147 CTC02146 recT [- COG5377 COG3723]
3 Streptococcus mutans UA159 B/C NC_004350.1 + 560889 560965 murF [COG0770]
4 Clostridium tetani E88 B/C NC_004557.1 + 560452 560612 CTC00544 [-]
5 Streptococcus pyogenes B/C NC_002737.1 + 850151 850283 SPy1039 [-]
6 Streptococcus agalactiae B/C NC_004116.1 - 2005295 2005812 SAG2028 [-]
7 Streptococcus mutans UA159 B/C NC_004350.1 - 1789235 1789719 SMU.1904c [COG0526]
8 Chlamydophila pneumoniae CWL029 P/C/V NC_000922.1 + 1053931 1053983 bioF_1 [COG0156]
9 Bacillus halodurans B/C NC_002570.1 + 377936 379094 BH0353 [COG1309]
10 Buchnera sp. APS P-g NC_002528.1 + 189538 189581 pta [COG0857|COG0280]
11 Listeria innocua Clip11262 B/C NC_003212.1 - 2512930 2513012 lin2487 [COG3878]

0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  AACATGACACCTACAG----------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  AATACAAGGAAAACTGTGAATATATGATAATATAT---------------------------------------------
5  CGAGTTGAGTACAAACAAGAAACCTTATTTCTAAGGCTTCTGTCAACAATTG----------------------------
6  TATTATTGTGTAAAGGATAATAGGCTGTGATTGTCTAAACTCAATTACCATTCATAAAGATTTTCAAGAAAAATAATAAA
7  TAAAAGTTAAAGTAATGAGAACTAAAGTAGGTTTAGCTATTTTTATGATATTAGGGATAGTTGGAATTTTTCGCAGTACT
8  --------------------------------------------------------------------------------
9  GGGTGGGTGCTATTTTATTCGCTCAGCTTTAAATGGGAGACTACTCCTTTACTAAATAAGTAGTAAGTAGGCATTGAACG
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  TAATTTTGGGGACAAATGATGGGACAAATCCTCTTCTGTCAAGCAAAAAAGCCTTTAAATAAAGGCTTTTTCTTATGTAG
7  GATATTTTTGTAAGTTTAACCTTGATTTGCGTAGAGTTCTATCTTCTGTATTTATTTTTTCGGGATTCTTCCAAATAGCG
8  --------------------------------------------------------------------------------
9  AGATCTTGTATTCAAAAACCAAGCGTGGTGCGAACCCCAAGCGCACATGGAATTCCTGGGAGGTTCGCACCCGTTGGTAT
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  TTTAATGCCCCTACAA----------------------------------------------------------------
7  ATAATATCTATATTTAAAATTAAAGAAA----------------------------------------------------
8  --------------------------------------------------------------------------------
9  AACTGAGTTTTTAATGAAATGCATAGCATAAAATGTAAAATGATAGTAAACTAAAGATAGGTTCGCACTTTTGCCCGTAA
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  AAACCCTTGAGGGACAAGGAACCAACCTGGGCGCTGTCGCACTCTATATGGGTGCGTGGATTGAAATAAGAGAGGAGGTT
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  ACGCTTTGACTGGCGATACGTTGTCGCACTCTATATGGGTGCGTGGATTGAAATTATCAAATTGCCAGTAGATGTTGAGA
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  TAGTCGACGGTCGCACTCTATATGGGTGCGTGGATTGAAATTCCGATCGACGGTCTTGTGAATCTTGTAAAAGAAGTCGC
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  ACTCTATATGGGTGCGTGGATTGAAATCGTCTAATTTTAAAGTGAACTTTTCAAGTAATTCATGTCGCACTCTATGTGGG
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  TGCGTGGATTGAAATACCAGTTGTCATTGGTCTATCTCACCTCCCCTCGTCGCACTCTATATGGGTGCGTGGATTGAAAT
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  AAGATTACCGAAAATCGTCGTAAACTTGTCGCGTACGTCGCACTCTATATGGGTGCGTGGATTGAAATCTTACTTGGAAA
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  GGGATTGCTATGACATACGAAAGTCGCACTCTATATGGGTGCGTGGATTGAAATAGCAGCTCACCGGCCAAGTGCAAGAC
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  ACTACAGCCGTGTCGCACTCTATATGGGTGCGTGGATTGAAATGCTTGCGTCATGTCGCGGAAATAGACGAGGTTTAGGT
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  CGCACTCTATATGGGTGCGTGGATTGAAATTCTAAATGATTTTAATTGCACAAAAAAGACCGAGTTGTCGCACTCTATAT
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------

  
0  ______AAAAGGGACTAGGGGAGACAGTACCCCCAAGTCTCTTTTT_TATATTGATATATCATTCTTTTATCACTT_TTT
1  -----------------------------------------GAAAA-AACTAATCTGACAAGAAATTGTCGGATTA-GTT
2  ------GACAATTAATTTTAAGTCTATACAGCTTATTAACAGTAAT-AATTCTAATAACAATAAATATTAAAAGAA-TAA
3  ----------------------------------------------------------ATCCGCTGAGAATCTCTAATTT
4  ------AGATGTAGTATTGTTTATAGAAACAATACTACATCTTTTT-TATATTGATAAA--AGTCTTTATTTAAAT-ATG
5  ------GAAAGAGGCTTGGGGCGT---TTAGCCCAAGTCTCTTTTTATAAATTGTTATAAATTGCTAAAGTAGAAG-AGA
6  ------AGTAACTATATGTATTTAAAGTTAATGTATAAAAAAAGAA-AACAAGTAATATCAAGGAATTTATCACTT-TTT
7  ------TATACTTGATTTCTTATTACCTTTGCGACATTTTATTTTT-TATATTGATACATCATTAATTCAGCAGCT-ATC
8  --------------------------------------------------------------------------------
9  GGGTGCGTGGATTGAAATCTTATGTTTTGCTCCATGGTACGGTTGT-TGAATGTACCTATCATTCTTTTA-CACTT-ATT
10  ------------------------------TTATTTCTTAGTATTT-TATATTGATATATCATAACAGGAAAATT-----
11  ------------------------------------GACTTCTAAA-AGCAATATCTGTTAGTGCAGATATTGCTT-TTT

  
0  GTTTATGTTA__TAATGAAGGTTGGAAAATAGAAACGTTGATACATAGTGAGGGATTAAACA__________________
1  TTTTATGTTA--TAATGAAGCAAATAGATGAAGAAGAAGGTTACGA----------------------------------
2  TAAAGGCAGG--TGATGAAGGTTGGGAATTAGCAATGTTGATACCAGTTCTGATATTCTTAGCAAATGTGATTTAGACGG
3  GTTTATGTTA--TAATAAAAGAGCGAAAAGCTCTTTTTATTTTTTAGGAGAAGCAAA-----------------------
4  GTTTGGTCGA--TATAGACTATTAGTGAATTAGTTTTAAGATTTGAGGTGGATATTTT----------------------
5  AAGGATATTG--G-------------------------------------------------------------------
6  GTTTATAAAAATTAATAAAGAAAGATAAATTTTCTAGAACAAATCTAGAACAAAAATAAGTTATTGAAGAAATACAAGAT
7  ATTAGGAAAA--ATTACATATGATTAGTAGTAATTGTTTTAGAAATATTAAGACAGAAACGAAAAATAAAAGGCCTATAA
8  ----------------GTAGCCGTTTCTCTGGGTAGGTTGATACATAGTGAGTTTGCAAGGAGAGTTTC-----------
9  GTTTAGTAAG--TTAGCTAGTCAACTAACTTACTTTGTTTCTAGTCATTTTAAAAAGATAACAAATCAGTAAAAGCCACC
10  --------------------------------------------------------------------------------
11  TGTTATGTTA--TAATGAAGG----AAAAATGAAA-GTAGGTAAGTCC--------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  AACGGAATTATACGGAGTAGATGGACAAACCATAGTAGACATTAGAGAAATGGTAACAGAACATATAAAAAGTTTATTGG
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  ATACCTTTTTTAGAGTACTCAAATGTATTTGAATATTACATAAAAGATGAATATATTAATCTTAGTTGATTTTCAAAATT
7  AATAATTCTTTGGAATAGTATTATTCTATTGTTTGGGAATATGATAATTAATTGAACTTTTTTGATTCTAGGAAATAACA
8  --------------------------------------------------------------------------------
9  AGTAGACAACATTCGAAGCATCTTTTGAAAGGAGTTACTCCCGC------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  AGGGAGAAGAATGGTAAAAACCTATGTAAAAGACGGAATTGAATATACAAGTTCAAACCACCGCATGATATACAATCCAG
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  AAAAAAATCTCCAAAAATTTATTTTTAAATATATTTTTAGTTGTTATATAAAGTAATTTGACTATTGAAATAAAAATATT
7  GATTGAGCTAGTTTCTAATATTTAAAGAGTAAGGCTAAATTCTATTATAAAAGGAGAATGGTAAACA-------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  AATTTCATTTTAAACATAATAAAGCATGGACACTTAAGGATATTGCCTATCTTTGTGGTATGTGGGAAAGCACAAAGAAA
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  CAGAGAGAAGTAAAACCAATTCTAAATGAT--------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  AAAGATATATCATTAGCACTTGGAAGGACAGAAGGAACATGTATGTCAAAGGTTTGTGGACTTAAAAAGAGAGGTGAATT
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  TAATAGATATAAAAGAATGTTTAAAGAAGTATAAAAAAAGAGCTGCAAGAGCAGCCAAATTAAAATACTTAAATAAAAAA
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------

  
0  ______________________________________
1  --------------------------------------
2  CCAATTACAGTTTATAAGAAAACGGAGGAATTGTAAAG
3  --------------------------------------
4  --------------------------------------
5  --------------------------------------
6  --------------------------------------
7  --------------------------------------
8  --------------------------------------
9  --------------------------------------
10  --------------------------------------
11  --------------------------------------