BLISSBreaker Lab Intergenic Sequence ServerHome

Intergenic view options: Interleaved

NC_000964.1 Bacillus subtilis (+ 1617435 to 1617707) circular

Islands  CCA.CCACGAACAGGAGAA.A.G.CGAA...GAAGCGCCGC..CCCGAGGA.A.GGCAGAA..AA.CG,,,,CC.CAG,,
5'-   CCATCCACGAACAGGAGAATATGTCGAATTTGAAGCGCCGCTTCCCGAGGATATGGCAGAATTAATCGAAAACCTCAGAA
       |         |         |         |         |         |         |         |    
       1617440   1617450   1617460   1617470   1617480   1617490   1617500   16175
       |         |         |         |         |         |         |         |    
3'-   GGTAGGTGCTTGTCCTCTTATACAGCTTAAACTTCGCGGCGAAGGGCTCCTATACCGTCTTAATTAGCTTTTGGAGTCTT
Islands  GG.AGG.GC..G.CC.C..A.ACAGC..,,,C..CGCGGCGAAGGGC.CC.A.ACCG.C..AA..AGC....GGAG.C..

  
Islands  ,,,,CGG..GACAGAGGG...C....C.G,,,.AA.,,,CGAAGC.GAA.AGA..C...,,,,CAG.CCAGAGAGGC.GA
5'-   AAAACGGTTGACAGAGGGTTTCTTTTCTGAAATAATAAACGAAGCTGAATAGATTCTTTAAAACAGTCCAGAGAGGCTGA
       |         |         |         |         |         |         |         |    
  10   1617520   1617530   1617540   1617550   1617560   1617570   1617580   16175
       |         |         |         |         |         |         |         |    
3'-   TTTTGCCAACTGTCTCCCAAAGAAAAGACTTTATTATTTGCTTCGACTTATCTAAGAAATTTTGTCAGGTCTCTCCGACT
Islands  ....GCCAAC.G.C.CCC,,,G,,,,GAC...A..A...GC..CGAC..A.C.AAG,,,....G.CAGG.C.C.CCGAC.

  
Term (99.90)%  -----------------------------------------------------CCCCTCTATGCTCTGGCAGGAGGGG--
Islands  GAAGGA.AACGGA.AGACGGGA.GCG.G.A.AGGCGCGCACC..G.CC.,,,,CCCC.C.A.GC.C.GGCAGGAGGGG..
5'-   GAAGGATAACGGATAGACGGGATGCGTGTATAGGCGCGCACCTTGTCCTAAAACCCCTCTATGCTCTGGCAGGAGGGGTT
       |         |         |         |         |         |         |         |    
  90   1617600   1617610   1617620   1617630   1617640   1617650   1617660   16176
       |         |         |         |         |         |         |         |    
3'-   CTTCCTATTGCCTATCTGCCCTACGCACATATCCGCGCGTGGAACAGGATTTTGGGGAGATACGAGACCGTCCTCCCCAA
Islands  C..CC.A..GCC.A.C.GCCC.ACGCACA.A.CCGCGCG.GGAACAGGA....GGGGAGA.ACGAGACCG.CC.CCCC,,
Term (66.03)%  -----------------------------------------------------GGGGAGATACGAGACCGTCCTCCCC--

  
Islands  ....C..C.A.A.GAAC.G.GAGG.G.CACACA
5'-   TTTTCTTCTATATGAACTGTGAGGTGTCACACA
       |         |         |       
  70   1617680   1617690   1617700   
       |         |         |       
3'-   AAAAGAAGATATACTTGACACTCCACAGTGTGT
Islands  ,,,,GAAGA.A.AC..GACAC.CCACAG.G.G.

IGR  +  1617435  1617707  ()  12  pyrR

Blast Hits

ID Organism Class Accession Start End Operon
0 Bacillus subtilis B/C NC_000964.1 + 1617435 1617707 pyrR [COG2065]
1 Streptococcus agalactiae B/C NC_004116.1 - 1128150 1128325 hom thrB rarD folC folE folP folB folK [COG0460 COG0083 COG2962 COG0285 COG0302 COG0294 COG1539 COG0801]
2 Clostridium perfringens B/C NC_003366.1 - 1419247 1419530 uraA [COG2233]
3 Clostridium perfringens B/C NC_003366.1 - 1379305 1379715 pyrB CPE1182 pyrC pyrF pyrZ pyrD [COG0540 COG1781 COG0044 COG0284 COG0543 COG0167]
4 Oceanobacillus iheyensis B/C NC_004193.1 + 1527003 1527162 pyrR [COG2065]
5 Lactobacillus plantarum WCFS1 B/C NC_004567.1 - 2142281 2143432 pyrP [COG2233]
6 Listeria innocua Clip11262 B/C NC_003212.1 - 1972534 1972764 pyrR [COG2065]
7 Listeria monocytogenes strain EGD B/C NC_003210.1 - 1918133 1918362 pyrR [COG2065]
8 Clostridium acetobutylicum ATCC824 B/C NC_003030.1 - 2206746 2206850 uraA [COG2233]
9 Clostridium acetobutylicum ATCC824 B/C NC_003030.1 - 2759486 2759968 carA [COG0505]
10 Streptococcus pneumoniae B/C NC_003028.1 + 667513 668158 SP0701 [COG0284]
11 Streptococcus pyogenes B/C NC_002737.1 + 679962 680356 pyrR pyrP [COG2065 COG2233]

0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  TATTTAATGTATTTTATAAAACCTTAATAATAGAACTTACAAATAATATGGAGAGAATATATAATTATTCTAAGATTTAA
4  --------------------------------------------------------------------------------
5  GTTGCATTGACAAAAGGTAGCACCGCCAGGCAATGTCTGGGGGGCTACCTTTTTGTTTTCCAAAATTATTAACAACTTTA
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  TTTGAGTGTACGAAAAAAGAAAAATAACAATAGTGCTCATACTAATTGCAGAAGTTTTGGGTGATAAGATAACTGATAAA
11  ACAGCGAGGAGTAGCCATTATTTTTAGTCTTATATCTTTGTGTAAAGTTTTTAACATTATAAAAAATACTAAAAAGCATT

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  GCTATAATCATCCGCATTCTGTGAGTTCATTAGTCATGAATCGTGACTAAAACGTGCTAATTTCTAAGATTAAAAGCAGC
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  TTGCAATAAAAAATGCAACATTTTTAAATCTCCTCTATAAGTGCTTCAAAAAGTGCTTCAAAACCTGTCTTGTAATCCAA
11  TACGATAAGCCAGGAAATATGAGAAGTCTTTTATGTTATTGGG-------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  CAGCTATGGACCACTGGAAACGGGTGTAAGTGGGCGTAAACATGCTTTGCTGGTTCGTCCTAAGCCGACTTCCAGTCGTG
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  GTATTTTTGGGGACGGTGATTAATAAGCTAGCAAAGCATCATTAAGGATTTTTTCGGTAATTGTTGCCAAATCGGTTTAA
11  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  ACAGTGTTCGAATGGCTGACGAAGATGTACCTAACTTTTGATGAATTTGTCGTTGCTTTTTACAACCAGTAATTTTGTCA
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  GAAAATACTCACGAAGAAGTCCATTCGCATTCTCATTACTTCCCCTTTGCCAAGATGAATAGGCATCCGCAAAATAAAAC
11  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  ATCAACCGGCAGACTGAAAATGATATTGAGATAGCTCACTAATCCTGAATTGGTGTAGTAAAATTTAATCTCTTGACAAA
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  AGAATTCCCATTTGTTCAATTAAAGGGTAACAAGCAAACTCTTTT-----------------------------------
11  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  GTGCTAATGCACCTAACGCTTTGTTTAAAGTTCCAGTGTCAAAATAGTCAGCGACAAATTGTACCAAGTTAAGTGGCCGT
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  TCATCAGCCATTTGAGCGGCTTACCGACCGGAGGGGCTGGGTGACAATGCTCAGTAGCCAAATTATTCTTAGCTGGAAGT
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  GGTCTGCTTCCGGCTTAGAATAAGACTCGTATTTGAGATGACGCGGGTTATGCGTTAGCTCAAATCGATGTCGGCTGCGT
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  TCCAGCAATTGTCACCCAGCCCCGGAGGTCGGAATAGGACCCACACCGGCTGACGCACAACAATCTAATTAGCACGTTTT
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  AATCACCGTTAATGCCAAATAATAATTTGTACAATGCGTATATTATAGGTAGTTATTGACATTAACTGTTGGGGGACACT
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------

  
0  _____________________________________________________________________________CCA
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  -----------------------------------------------------------------------------ATT
4  --------------------------------------------------------------------------------
5  GGATAATTAGGGTGTTTTAGATGGCGATTACGCTGTATTGGTCGAATATTCGGTAACGTTGGGTGAGAAAGTCACATTAT
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  -----------------------------------------------------------------------------TCT
11  -----------------------------------------------------------------------------ATA

  
0  TCCACGAACAGGAGAATATGTCGAATTTGAAGCGCCGCTTCCCGAGGATATGGCAGAATTAATCGAAAACCTCAGAAAAA
1  ----------------------------------------------------------TTATTTCTCCTTAACTTTTAAA
2  -------------------------------------------------TTATATTAATAAAATGTAAAAAGCTAAATTA
3  CTTATAAGAATTTAATTAATTCTCAAAATGTGTTTGTAAGTTTTATTTTTAACTTAAAATAAAAAATAATTATTAAAAAC
4  --------------------------------------------------------------------------------
5  TTCAGGAATGTTGTCACAAATATTATGATGTTTTGAACTAATATCGTTTTTAGGGGCTGTTACTGGTTCGGTTCAAACAT
6  ---------------------------AATTTTGGCCTCCTTTATTTTATTATAAACAGTATAACATGTTTTATATTTTT
7  ----------------------------ATGTTTGGCCTCCTTTATTTTATTATTAATAGTATAACATGTTTTTCTTTTT
8  -------------------------------------------------------------------TTTTTATTTAAAC
9  ---------------------------------------------------------------TAATGCTATTGACAGAG
10  CTGTCCGAAGTGAAAGTCTTTAACTATTCTTTTGGAAAGAGTCTTGTGAGGTGTTCAATAGCAGTCAACATGGATTTAGC
11  TGCAACATATCTGTTAGAGATCTTTATTTAAACTCCTTAAAGAAAAGAGATATTCCAAATAGATGCTAGGTATTGTCTTT

  
0  ACGGTTGACAGAG_GGTTTCTTTTCT_GAAATAA_TAAACGAA_____GCTGAA_TAGATTC_TTTAA__A_AC__AGTC
1  GTACTTTTATTGT-ATCATCTTTTCT-GAAATAA-TATTCTCT-----TTTTAA-GAACTTT-CATAG--G-AC--AAGA
2  TATATTGAAAAAT-AATATTAATTTA-AATATAA-TCTAATAA-----AATAAA-ACTATTC-TTTAA--AGAT--AGTC
3  ATTATTGACATAA-AATTTCTAATAT-GGTATTA-TAA----------GCACAA-TA---------AA--A-GC--AGTC
4  --------CAGTT-TAAGAATCTTTT-GGAATAA-TACAAGAAGAACAGTTGAA-TAGAACC-TTTAA--A-AAATAGTC
5  TGAGTTGACAATT-ATTTCGGAGACG-AGTAGAC-TAATTGCA-----ATTAAA-CAGTTCC-TTTAA--A-TT--AGCT
6  TTGATTGACAGGGAGAGTTCTTTCAG-GTAAGAT-GAATCTAA-------TGAAATAAAGTCCTTTAA--C-AT--AGTC
7  TTGATTGACAAGG-AGAGTTCTATCA-GTTAAGA-TAAGTCTA-----ATGAAA-TAAAGTCCTTTAA--C-AT--AGTC
8  TTCAGTTAAGATA-TTTTGATTAACG-TTTAACA-AGAAAATT-----ATATAG-AGGTACT-TTTAA--T-AT--AGTC
9  CATATGAATAGTG-GTAGTATTTATT-AAAGTAAGTTAA--AA-----ATTTAA-TATAC-C-TTTAATGA-TT--GGTC
10  TGTTTTTACTTGA-CAAGTGCTAGTA-GAAATAA-TAGAATA---------GTA-AAAAACC-TTTAA--A-GC--AGTC
11  TTTACTTGTTTTT-CTTTTCTTTTTTTGCTATAC-TGATTGAA-----ATAAAA-TAT-TCC-TTTAA--A-AC--AGTC

  
0  CAGAGAGGCTGAGAAGGAT_A_ACGGATA____GACGGGATGCGTG____TA__TAGGCGCGC_ACCTTGTCCTAAAACC
1  CGCGTTTGCCCTATAAAAA-A-TATTGGT----AATTTGTTATAAT----AT--AGCCAATGT-TTGTCTTGAAGTTAGA
2  CAGAGAGGCT-ACAAGAAT-T-AATTATT----TAGATTATAAATA----AA--AATTTTATT-TAGTTTAAAGAATTAA
3  CAGAGAGGCTGAATAAAAT-A-ACCTTTA----AATTTGATCCAGA----GA--GGTCAATAA-GGAAGTTATATAGTTG
4  CAGAGAGGCT-AGAAAGGG-A-TCGTAT----------GTTACATG----TA--AAAGTATGC-CCTTTTTCCTTTCTTG
5  CAGAGAGGCTGAAAAGGATGA-ACGGACG----TGCGCTTTCAAGC----AA--GCTGTGCGT-AATTTCGGACAGCCTA
6  CAGAGAGGCTAAGAAGG-T-G-ACG-ATAATTTGACGGGTTATTTG----TA--TACTCGTAC-GCGTT---------CC
7  CAGAGAGGCTAAGAAGG-T-G-ACG-ATAATTTGACGGGTTAATTG----TA--TGCTCGTAC-GCGTT---------CC
8  CAGAGAGGCTAAAAAGGAG-G-AATTATT---------------------------------------------------
9  CAGAGAGGCTAAGAAGGAT-T-AAAAGTT----TTGTTTTATGGAG----AG--TATTATAGT-CTTTTGCGTCTGGCAA
10  CAGAGAGGCAGCTAAGGTT-AGACGGTGA----AAGGGTGGAGACT----AC--CCATTTTTC-GTGGAACCTTGCTGTT
11  CTGTGAGGCTGTCAAGGAG-A--CGGATT----AAAAACATGCATCATGATACTTAATTGTGCTATATTTTGCTGAATCT

  
0  CCTCTATGCTCTGGCAGGAGGGGTTTTTTCTTCTATATGAACTGTGAGGTGTCACACA______________________
1  GACAATTTCTAAGGAGAAATTC----------------------------------------------------------
2  CTTCTTGCCTGTAATCTCTTTGGTAAGAAGTTTTATTTTTACCTTTTTAAATCAGTCCTGTGAGGCTGAAAAAAGGAGAA
3  AATTATAATCGTAAAAGATTTATTTATACGTGAAAAGTCTTCCTTATCTTAGGAAGACTTTTTTTAATAAAATTATATAG
4  GAAAAGGGCATTTTTAGATTGAGGTGAGATACGCAA--------------------------------------------
5  GCCGCTTTGAGTGGTGGGCTGTCTTTTCTTTTGCAATCATTCATAAAAAGGGGTGCGTT---------------------
6  CTTGCTTACACTGGCAG-AGGGTTATTTTTTTGCACA--AAAGGAGAGATTTCGG-------------------------
7  CTTGCTTACACTGGCAG-AGGGTTATTTTTTTGCACA--AAAGGAGAGATTTCGG-------------------------
8  --------------------------------------------------------------------------------
9  AAGACTTTTTATTTTTCAAAGAGAATTTATTAAATGTAATATTTAACCAACAAGAGGTTAAGTATATATTTATGATATAG
10  GGCAGGTTCCTTTTTTCGTGGCTTCTGTTGGCCAGACTCTCTCACTAGTAAAGGTAAAAGGAGAAACCT-----------
11  CCT---TGTT-TCCAAGGAGATCTTTTTATTTGAATTTTTAGAG-GAGGTTTCAAC------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  GCAGAGTTTTCTCCTTAAGAAAAAATAAGGAGGCTTAAATT---------------------------------------
3  CTTTTCTTCTTTAAATTAACACAGAGAGGTTAAAAAGGAGTGAAATTTT-------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  CTAAAATGTAATTAGAGTATTTTAGCAAAAAACCTTCTGTCTTAAAGGCGGAAGGTTTTTTTATGAATAGTGATGCATAA
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  ATATAAATAATGAATACATAAAACTAATCCTTCAATTTAAAAGAAAATATCATAAAACAAGCATTGACAGTATGGTAAAG
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  TATGAGATAATATATGTATAAATATAAAAATATATGTATATTGTATTAAAAATCGTGCTGGGAAGCTTAAAATAAAGAAG
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------

  
0  ______________
1  --------------
2  --------------
3  --------------
4  --------------
5  --------------
6  --------------
7  --------------
8  --------------
9  AGGTGGATTGTTTG
10  --------------
11  --------------