BLISSBreaker Lab Intergenic Sequence ServerHome

Intergenic view options: Interleaved

NC_000964.1 Bacillus subtilis (+ 1606750 to 1606950) circular

Islands  C,,,.A.A.A.AGA..CA.CC.AGGGG.GC...GCGAAGC.GAGAGAGAC...G.C.CAACCC....GACC.GA.C.GGA
5'-   CAAATATATATAGATTCATCCTAGGGGTGCTTTGCGAAGCTGAGAGAGACTTTGTCTCAACCCTTTTGACCTGATCTGGA
  |         |         |         |         |         |         |         |         
  1606750   1606760   1606770   1606780   1606790   1606800   1606810   1606820   
  |         |         |         |         |         |         |         |         
3'-   GTTTATATATATCTAAGTAGGATCCCCACGAAACGCTTCGACTCTCTCTGAAACAGAGTTGGGAAAACTGGACTAGACCT
Islands  G...A.A.A.A.C.AAG.AGGA.CCCCACG,,,CGC..CGAC.C.C.C.G,,,CAGAG..GGG,,,,C.GGAC.AGACC.

  
Term (99.98)%  --------------------------------------------------------------GCCGTTTCATCACATTTG
Term (98.40)%  -----------------------------CGGAGTACATCGGACTCCG--------------------------------
Islands  .CA.GCCAGCGGAGGGAAGCGG.G,,,,GCGGAG.ACA.CGGAC.CCG...G.....A..AAGCCG...CA.CACA...G
5'-   TCATGCCAGCGGAGGGAAGCGGTGAAAAGCGGAGTACATCGGACTCCGTTTGTTTTTATTAAGCCGTTTCATCACATTTG
  |         |         |         |         |         |         |         |         
  1606830   1606840   1606850   1606860   1606870   1606880   1606890   1606900   
  |         |         |         |         |         |         |         |         
3'-   AGTACGGTCGCCTCCCTTCGCCACTTTTCGCCTCATGTAGCCTGAGGCAAACAAAAATAATTCGGCAAAGTAGTGTAAAC
Islands  AG.ACGG.CGCC.CCC..CGCCAC....CGCC.CA.G.AGCC.GAGGC,,,C,,,,,.AA..CGGC,,,G.AG.G.,,,C
Term (61.84)%  -----------------------------GCCTCATGTAGCCTGAGGC--------------------------------

  
Term (99.98)%  AAACGGC----------------------------------
Islands  ,,,CGGC......GA....,,,GAA.AGGAGCGGA...ACA
5'-   AAACGGCTTTTTTGATTTTAAAGAATAGGAGCGGATTTACA
  |         |         |         |         |
  1606910   1606920   1606930   1606940   1606950   
  |         |         |         |         |
3'-   TTTGCCGAAAAAACTAAAATTTCTTATCCTCGCCTAAATGT
Islands  ...GCCG,,,,,,C.,,,,...C..A.CC.CGCC.,,,.G.

IGR  +  1606750  1606950  ()  25  ylmB

Blast Hits

ID Organism Class Accession Start End Operon
0 Bacillus subtilis B/C NC_000964.1 + 1606750 1606950 ylmB [COG0624]
1 Clostridium perfringens B/C NC_003366.1 + 1623219 1623510 CPE1372 [COG3859]
2 Clostridium perfringens B/C NC_003366.1 - 2917153 2917576 CPE2546 CPE2545 [COG0819 COG3859]
3 Oceanobacillus iheyensis B/C NC_004193.1 - 504853 505142 OB0476 OB0475 OB0474 OB0473 OB0472 [COG4732 COG0819 COG0351 COG2145 COG0352]
4 Bradyrhizobium japonicum P-a NC_004463.1 + 7330548 7330797 thiO bsr665 [COG0665 COG2104]
5 Fusobacterium nucleatum subsp. nucleatum ATCC 25586 Fus NC_003454.1 - 254856 255126 FN1759 FN1758 FN1757 FN1756 FN1755 [COG0351 COG0352 COG0422 COG2104 COG0476]
6 Clostridium tetani E88 B/C NC_004557.1 - 1866696 1866947 CTC01754 CTC01753 CTC01752 CTC01751 [COG4732 COG0351 COG2145 COG0352]
7 Clostridium acetobutylicum ATCC824 B/C NC_003030.1 + 3060500 3060780 CAC2928 [COG3859]
8 Clostridium perfringens B/C NC_003366.1 - 1580862 1581168 thiD thiM thiE [COG0351 COG2145 COG0352]
9 Salmonella enterica subsp. enterica serovar Typhi P-g NC_003198.1 - 2207429 2207837 STY2376 thiD [COG2145 COG0351]
10 Shigella flexneri 2a str. 301 P-g NC_004337.1 - 2190825 2191046 thiM thiD [COG2145 COG0351]
11 Caulobacter crescentus CB15 P-a NC_002696.2 - 2234113 2234343 CC2029 [COG0422]
12 Streptococcus pneumoniae B/C NC_003028.1 - 2121200 2121377 SP2199 SP2198 [COG0011 COG0600]
13 Pseudomonas putida KT2440 P-g NC_002947.3 + 3613681 3614124 pet18 PP3186 [COG0819 COG0819]
14 Yersinia pestis strain CO92 P-g NC_003143.1 - 3196924 3197432 thiD [COG0351]
15 Salmonella typhimurium LT2 P-g NC_003197.1 - 2241846 2242254 thiD thiD [COG2145 COG0351]
16 Bacillus subtilis B/C NC_000964.1 - 1391108 1391417 ykoF ykoE ykoD [- - COG1122]
17 Bacillus halodurans B/C NC_002570.1 + 2025463 2025806 thiC [COG0422]
18 Mycobacterium tuberculosis H37Rv Act NC_000962.1 + 501017 501145 Rv0415 Rv0416 thiG [COG0665 COG2104 COG2022]
19 Thermoplasma volcanium A NC_002689.2 + 1109523 1109668 TVN1053 [COG0477]
20 Bacillus halodurans B/C NC_002570.1 + 1519479 1519729 BH1431 BH1432 BH1433 BH1434 BH1435 [COG0352 COG2104 COG2022 COG0665 COG0351]
21 Lactococcus lactis subsp. lactis B/C NC_002662.1 - 316778 317478 ydbH [COG3859]
22 Thermoplasma volcanium A NC_002689.2 - 1310730 1310917 TVN1245 [COG0477]
23 Bacillus subtilis B/C NC_000964.1 + 955153 955402 thiA [COG0422]
24 Escherichia coli K12 P-g NC_000913.1 - 2183322 2183543 thiM thiD [COG2145 COG0351]

0  ________________________________________________________________________________
1  ATTTAAACATTGTAAGTTTTGATAAAAATTTTTATTTAATAATTAATATTACTTGACCTAATTGCAATTTGCATAT----
2  ACTATAAAAAATTTATGGGTAAAAATCAGTACGCATCTAAAATAGATACTTAATTTAAAATATAACTAGAATTTATTAGA
3  CTATCTCAGTCCCCTTTGAATCCCAATTTTATGTATTCAGATGACAGAATTTATTTATTTTGTTACAGTTAATATGAAG-
4  CCGCTGTCATTCCGGGGCAGTCCGCAGGACTGAACCCGGAATCTCGAGATTCCGGGCTCGATGCTTCGCATCGCCCCGGA
5  TATAAAAAATTCAACTAGAAAGAAATTTCTAGTTTTTTATTTATAAAAATTAATATTGTTCTATAAGTAGTATTGAATAA
6  TCCCACTTGACTGTTAAAACATGCTGTAGTATCATTTAATTAA-------------------------------------
7  ATTCAAAAAGTAAATCTTATGGAACTTAATACCTTAAGATTTACTTTTTCTCATGTATGTACTATAAT------------
8  AAAATATCCTCCTAAGCTTCATCATATATTTAAGATTATAATCCTTAAATTAAAAAAATTCAAAAAAGGTATGTTGAAAA
9  ACTTTTACCCTCCACATATGCGGGTCAGTTATCATCGTGTGTATCATTTCTGCTGGTGGCGTATCTGACAAGCGCTATTT
10  TTTATTAACGCGATTGTAAAACTGCCGTTTTTCCTCGTTTACAACGGGGGCGCTGGACATTACCATCCTCCTCT------
11  CGCCTGGGGGCATTGCGCCTTGACCTGTGCGTCAGTGTCCCTA-------------------------------------
12  --------------------------------------------------------------------------------
13  TGGCTTAAGCCTCTTTTTGCGGCCTGAGGGCCTTAGGCCATCAATGGCGTTTTGCCCGTTAAATGGCCATCAGCAACAGC
14  TGGTTACTTCCATAGGTACAAGTTAAACAGTCTTCTATGTATACAGATTCAATACAAGGGTATTTACTTCATTTATAGAA
15  ACTTTTACCCTCCACATATGCGGGTCAGTTAACATCGTGTGTATCATTTCTGCTGGTGGCGTATCTGACAAGCGCTATTT
16  ATTTGACCATCCTCTCCCGTCCCTATATGAAAAAAATGATTTCGTTGTTTACAAAATGATTCTTATCATCTATTATGATG
17  CAATGCGCCCTAATGGGTCTATTTTCCTAAAAAGACAACAATGCCTTTCCCTTTTCGCTCAGTTTCTTTATAATGAAACT
18  ATCGTGACGCTAGCGCGCTAGCGT--------------------------------------------------------
19  AATCGAAATTCACATTTCTTGACACATGAACTATTTATTTA---------------------------------------
20  CCATCTTTGCAACGAGATCAGAATATGTCATAATAAAAAGAGA-------------------------------------
21  TTCTTCTCCCTTTTTTCTAATTGATTTATTTTTCAAAATCAATTATTCCCCTTTTGATAAACTTTTTACATCTATTAGAA
22  TGTACTTTTACTCTTATAATAGTTTATTACATATATTTTTGTATGTCTCAATTAATGTCAACATGATCAAACCTTAAATA
23  --------------------------------------------------------------------------------
24  TTTATTAACGCGATTGTAAAACTGCCGTTTTTCCTCGTTTACAACGCGTGCGCTGGACATTACCATCCTCCTCT------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  GAAAATATAT----------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  ATGACTGCCCTGTGGCTAACGCGTTGACCACCCCGCCCCGCTGGCATACATTGGCACCGTTCCGAGGG------------
5  AAATAAAATGTGTGCTATTATAGCAAATATAGAGAAAATAAAATTAAAT-------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  AGAAAAGGAGCTATGGTATCATTTGGATTAGAAAATAGC-----------------------------------------
9  TGTTATCTCACGCCCCTTTTCGTAAAAAGTGTAAACGAAAGCGTCGTGCAGCAACATATCCGCCAGCAAGTTTGCCAGAA
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  TATGCCAACAGATATTTCAGTAATCCTTTGACATACAAAACCTTGCGGCGTCTGGCGTGCACTCAAAGATGGCGCGTCAA
14  TATTCAAAATTTTCCTACAGGTTTGTAGTCCCATTGTCGCCAATTGTGTCAAACCTGTGGCGTTATTTGGCCCCAATACC
15  TGTTATCTCACGCCCCTTTTCGTAAAAAGTGTAAACGAAAGCGTCGTGCAGCAACATATCCGCCAGCAAGTTTGCCAGAA
16  TTAAAATAAAAAATTGTATAC-----------------------------------------------------------
17  CGAACTTAATA---------------------------------------------------------------------
18  --------------------------------------------------------------------------------
19  --------------------------------------------------------------------------------
20  --------------------------------------------------------------------------------
21  AAATTAACCGTGCACCTGTTAATTTTTCTAATACTAAACAAATTCTTCAAGATAAAGCGCTCATGCTAAATAAAAATAGC
22  TGC-----------------------------------------------------------------------------
23  --------------------------------------------------------------------------------
24  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  CCGAATAGGTTTTGAGAACTATCTGATAACGCTAAAATTATCGTCCGCCGCTGACTGTAAATTTACATTGTCTGGCACAG
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  GAATGGGGACAGATACCCATTAGCGGGTCACCATTGCCCACAGTTTGGGGAGTTGGACTAGTGACAGGCGCGGCGCCCTC
14  ATTTGGGTGAGAACTGTCCAATCACCTCTCTTCCTGAAGGGGGCTCTCTCTAATATCCGTCGTGAATCATAGTTGTGATT
15  CCGAATAGGTTTTGAGAACTATCTGATAACGCTGAAATTATCGTCCGCCGCTGACTGTAAATTTACATTGTCTGGCACAG
16  --------------------------------------------------------------------------------
17  --------------------------------------------------------------------------------
18  --------------------------------------------------------------------------------
19  --------------------------------------------------------------------------------
20  --------------------------------------------------------------------------------
21  TCATTTCATATAAAGAAACGAGATATATCGTGGTACCATTCTTGATTTAAGCACTTTTTAGTTCACTGAAAATTTTCAGA
22  --------------------------------------------------------------------------------
23  --------------------------------------------------------------------------------
24  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  ACAGTATGCTTAATAGCGAAACCCCGCTT---------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  GGGTATACCTGA--------------------------------------------------------------------
14  AATACATCATTGATCTTCTGTTGCCCGCC---------------------------------------------------
15  ACAGTATGCTTAATAGCGAAACCCCGCTT---------------------------------------------------
16  --------------------------------------------------------------------------------
17  --------------------------------------------------------------------------------
18  --------------------------------------------------------------------------------
19  --------------------------------------------------------------------------------
20  --------------------------------------------------------------------------------
21  TCCCAAAGGCAACTTTCAAGTTCAATAACGAGAACCATTCCGTCAAGAGCTTAGTTAAACCTCACTCTTGCTACGCTTAT
22  --------------------------------------------------------------------------------
23  --------------------------------------------------------------------------------
24  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
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13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------
16  --------------------------------------------------------------------------------
17  --------------------------------------------------------------------------------
18  --------------------------------------------------------------------------------
19  --------------------------------------------------------------------------------
20  --------------------------------------------------------------------------------
21  CAAGCCATTTTCATTGCTTCACTCAGGCTTGCTCTCACCGCTACAAGCTCTCTGTGCTGACCTTCACAATTACTTACTCG
22  --------------------------------------------------------------------------------
23  --------------------------------------------------------------------------------
24  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
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11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------
16  --------------------------------------------------------------------------------
17  --------------------------------------------------------------------------------
18  --------------------------------------------------------------------------------
19  --------------------------------------------------------------------------------
20  --------------------------------------------------------------------------------
21  ACCGCTTTTATTTTGTCCGAATTTGTGTATAGACTTATTCTAACAGACTTTCGTTTTTTTTGAATTATTGATTTTTTATG
22  --------------------------------------------------------------------------------
23  --------------------------------------------------------------------------------
24  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
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9  --------------------------------------------------------------------------------
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11  --------------------------------------------------------------------------------
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13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------
16  --------------------------------------------------------------------------------
17  --------------------------------------------------------------------------------
18  --------------------------------------------------------------------------------
19  --------------------------------------------------------------------------------
20  --------------------------------------------------------------------------------
21  TTGCCTTAAATATTTTTTAAGTTTAATTTATAAAATAGATTAACAATCTTAAAAAAATGCTTTTCAACTTAAAATATGCT
22  --------------------------------------------------------------------------------
23  --------------------------------------------------------------------------------
24  --------------------------------------------------------------------------------

  
0  ____________CAAATATATAT_AGA_____TTCA__T__C_CTAGGGGTG_______C_____TTTG_C__G_A_AG_
1  ------------AAAATATACTT-AGAATTATTTCA--TGTG-CTAGGGGTG-------C-----CTTT-A--G----G-
2  ------------ATAATAATTAT-AGAC----TTTA--T--AGCTAGGGGTG-------CC----TTTG---------G-
3  ------------TAAATAAATACGAAA-----AGCAACT--A-CTAGGGGTGCCCAGTAC-----TATG-T--G-T-GGG
4  ------------GTGCTCCGAGG-AGG-----AGCT--G--A-GATACCGCT-------A-----AATG-G--G-C-AA-
5  ------------AATAAAAAAAC-TAG-----TTAC--A--A-GGGAGTTAA-------T-----AAAT-T--G-A-CT-
6  ------------TAATGGAATAA-AGT-----TTCA--G--G-GGAGC--TG-------G-----TTTA-T--G-TCAG-
7  ------------GAAATAAAAA--ATA-----TATG--T--G-CTAGGGGTG-------C-----CTTT-A--G----G-
8  ------------ATAAAAAATAG-CTA-----GGGG--G--G-CCAGTAGTG-------T-----CTGG-C--T-G-AG-
9  ------------AACATGGTGGG-GCT-----TGAC--G--A-CTCGGGGTG-------CCCTTCTTTG-T--G-A-AGG
10  ------------GCGATTTATCA-TCG-----CAAC--C--A-AACGACTCG-------G-----GGTG-C--C-C-TT-
11  ------------GTGTCCGACGT-CTG-----TTCA--C--C-GGGGGGCCG-------C-----TC-G-C--G-C-GG-
12  -------------------ATAT-ACA-----TATA--A--T-ATATGGGAGT------C-----TGTG-T--A-C-AGT
13  ------------GCGCCACCAAG-GGG-----AGCC--C--G-GCAATGGGC-------T-----GAGA-A--A-C-CG-
14  ------------CGTGATAATGA-CCA-----TTCT--G--A-CTCGGGGTG-------C-----CTGC-CACA-A-TG-
15  ------------AACACGGTGGG-GCT-----TGAC--G--A-CTCGGGGTG-------CCCTTCTTTG-T--G-A-AGG
16  ------------GGAAAGCACTA-GGG-----GTGC--T--G-TTTTGGCTG-------A-----GATA-A--A-G-CG-
17  ------------GAAATAACTAG-GGG-----AGTC--C--A-ATGAGCTGG-------G-----CTGA-G--A-A-AA-
18  ------------GGAACCCTGTA-GAC-----ACGG--G--A-GTCCCGGGA-------G-----CGGG-G--T-C-TG-
19  ------------TGATATAAATA-AGA-----GGAC--G--A-TAAGGGGAG-------C-----TTCG-TAAG-A-GG-
20  ------------ATGAATAATTG-CAC-----AGGA--G--A-CTAGGGGTG-------------TCTG-C--TTA-AGT
21  AAACTTAAAGGGTAAAAATAAAT-ATT-----TGCA-------CAATGGGTC-------T-----ATTGAC--A-A-AA-
22  ------------GATGAGAATAT-CAG-----TTCA--T--A-A-AGGGGAG-------C-----TTCG-TAGG-A-GG-
23  --------------GTGCGAAAT-CAA-----TAGT--T--A-CTGGGGGTG-------CCCG--CTTT-C--G-G--G-
24  ------------GCGATTTATCA-TCG-----CAAC--C--A-AACGACTCG-------G-----GGTG-C--C-C-TT-

  
0  ___CTGAGAG___A_G____AC_TTT__G____T___C____T_C___A___ACCCTTTTG_ACCTGATCTGGATCATGC
1  ---CTGAGAG---A-TGATTAT-TTT--A----T---CA---T-T---A---ACCCTCAAC-ACCTGATCTGGAAAATTC
2  ---CTGAGAG---A-T----AA-CAT--T----T---CGTTAT-T---A---ACCCTTAAA-ACCTGATCTGGATAATAC
3  ---CTGAGAGGAAA-GC---AC-CTA--C----T---T----T-C---CG--ACTCTTATGGACCTGATCTGGTTAATAC
4  ---ATCCGCC---C-A----GG-ACC--G----C---G----G-T---G---ACCCTTTGA-ACCTGATCCGGGTCATGC
5  ---GAGAAAA---G-G----AT-GTG--A----G---C----C-T---T---GACCTTTTG-ACCTGATTTGGATAATGC
6  ---CTGAGAGTA-A-G----AA-CTAAAT----T---C----T-T---A---GACCCTTTA-ACCTGATCTGGATAATGC
7  ---CTGAGAA---A-C----AG-TTT--G----T---C----A-CGTTA---ACCCTTA---ACCTGATCTGGATAATAC
8  ---ATTAGAA---ATG----AA-ATT-------T---C----T-T---G---ACCCTTTA--ACCTGATCTGGTTAATAC
9  ---CTGAGAA---A-T----AC--------------------------------CCGTACC-ACCTGATCTGGATAATGC
10  ---CTGCGTG---A-A----GG-CTG--A----G---A----A-A---T---ACCCGTATC-ACCTGATCTGGATAATGC
11  ---CTGAGAT---T-G----GG-CTCACG----C---C----C-T---G---ACCCGTAGA-ACCTGATCCGGGTCATGC
12  ---CTGAGAGGA-A-G----TG-TTA--A----A---C----TTC---G---ACCGC-----ACCTGATCTGGGTAATGC
13  ---CTGAACG---C-T----AC-AGC--G----C---G----G-T---G---ACCCTTCGA-ACCTGATCCGGATCATGC
14  ---CGGTGGT---AAG----GC-TGA--G----A---G----A-T---G---ACCCGTATT-ACCTGATCTGGATTATGC
15  ---CTGAGAA---A-T----AC--------------------------------CCGTACC-ACCTGATCTGGATAATGC
16  ---CGGA-AG---A-A----AC-GCG--C----T---T----T-G---A---TCCCTTATG-ACCCGATCTGGATAATAC
17  ---AAACGCG---A-T----GA-AGT--T----T---T----T-A---A---ACCCTCGGG-ACCTGATCTGGATCATAC
18  ---AGAGTGG---G-C----GC-GCC--T----G---C----C-C---T---TACCGTCAC-ACCTGATCCGGATCATGC
19  ---CTGAGAG---G-A----TC-CGA--G----AAGGA----T-C---G---ACCCTTTGA-ACCTGATCCGGGTAATGC
20  GGACTGAGAA---A-A----AGGTGT--G----T---T----C-C---TTTTACCCTCAT--ACCTGATCTGGATCATGC
21  ---CTGTCAG---T-A----GC------G----A---G----A-A---A---TACCATCTG-ACCTGATCTGGGTAATGC
22  ---CTGAGAG---G-A----TC-CGA--G----G---AGGA-T-C---G---ACCCTTTGA-ACCTGATCCGGGTAATGC
23  ---CTGAGAG---A-G----AA-GGC--AAGCTT---C----T-T---A---ACCCTTTGG-ACCTGATCTGGTTCGTAC
24  ---CTGCGTG---A-A----GG-CTG--A----G---A----A-A---T---ACCCGTATC-ACCTGATCTGGATAATGC

  
0  CAGCGGAGGGAAGCG_G____TGAAA_A_____GCGGAGT__ACATCGGACTCCGTTTGTTT___TTATTAAG_CCGTTT
1  CAGCGTAGGGAAGCG-T----TTAGG-G-----CTGTATTTAACACCGGA-TC--TATATTT---AGATTCGG-TTTTTT
2  CAGCGTAGGAAAGCCTG----TAGAA-A-----GTTTTAT--A-ATAGTATTTTATATGTTTAGATTATTATG-ACTTTT
3  CAGCGTAGGGAAGTA-G----TCAAT-AATTTTGATGATT--ACATT---CTCAGTATACCA---AAACCAGG-TCCTTT
4  CGGCGAAGGGACAGG-G---------------------------------------------------------------
5  CAACGTAGGAAGTAA-A----AGAGT-T-----TATTTTA--AATTGTAAGCATATACAAAT---TGGGTAT--------
6  CAGCGTAGGGAGATG-G----TTTAC-T-----ATATAAT--TTTATATTATATAGTTGTAC---TATTTGAA-TGCAAA
7  CAGCGTAGGGAAGCA-GTT--TGAAT-T-----TTGAATT--ACTTG-----CTGTAATTTG---CAGTTGAT-CTGTTT
8  CAGCGTAGGGAAGCC-C----AAGAG-A-----CAAATAT--ATTTAAATTGATTTTAAAGC---ATATATAG-CCTTAG
9  CAGCGTAGGGAAGTC-T----GACAC-T-----GCTCGTG--TCCCTTCTTCACGCGGGCAG---GAGCTGAA-CC----
10  CAGCGTAGGGAAGTC-A----CGGAC-C-----ACCAGGT--CATTGCTTCTTCACGTTATG---GCAGGAGC-AAACT-
11  CGGCGAAGGGAGGG----------AA-C-----GCGGACG--ACAGCGTTTGTCTCGTCCGT---AAGACCGA-CTCAAG
12  CAGCGGAGGGAACGA-T----ACTTA-G-----TCTAATT--TTGCACCTTTTCCATGTATG---GTAAAGGT-TTTTCT
13  CGGCGAAGGGATGGG-G----CTTGT-A-----ACCTGCC--TTTTTGCCGGCCTCACTGCG---AGGCCAGT-CCATGT
14  CAGCGTAGGGAAGTC-T----CGGCA-C-----CGTAGGG--TTCCGCCTTCTTGACCGCCG---GTTAGGAG-GGAATA
15  CAGCGTAGGGAAGTC-T----GACAC-T-----GCTCGTG--TCCCTTCTTCACGCGGGCAG---GAGCTGAA-CC----
16  CAGCGTGGGGAAGTG-CAGGTTGACCGA-----ATGGTGT--ATTTTTTTGTGCGCTTAATC---GATCTATGACTGCAT
17  CAGCGTGGGGAAGTT-A----TCATG-T-----TATACCA--CACGAATGTATTTTATGCTA---GGGTCCGT-CTGAAT
18  CGGCGAAGGGAGGTC-A----AGG--------------------------------------------------------
19  CGGCGGAGGGAAGT------------------------------------------------------------------
20  CAGCGTAGGGAAGTC-G----ACTGC-A-----CGTGACG--ATCATCATGGGTAGCCGGCA---TCCTTATG-GATGGC
21  CAGCGTAGGAATGTG-T----TAAGA-C-----AAATGTC--TAATTTCTAACCCTCCTT--------------------
22  CGGCGGAGGGAAATT-----------------------------------------------------------------
23  CAGCGTGGGGAAGTA-G----AGGAA-T-----TGTTTTT--GTTATTGTCTTGCTGGGCAA---TAATATGT-TTCTTT
24  CAGCGTAGGGAAGTC-A----CGGAC-C-----ACCAGGT--CATTGCTTCTTCACGTTATG---GCAGGAGC-AAACT-

  
0  CATC_ACATTTGAA_ACGGCTTTTTTGATTTTA____AAGAATAGGAG__CGGATTTACA____________________
1  TATTTACATTCTTT-AGACTCTCTAAGCACACT----TAAAGTTTAAG--GAGGGGGTAAAAACT---------------
2  TATA-AATTAAGCT-ACATCCTACATGGATGTA----GCTTTTATTTT--TTATTAGAAATGTTATAACCAACTATGATT
3  AAT-------TGGA-CCTGGTTTTTTGTTTGTT----TTAAAAAGGAG--AGATAAA-----------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  AGTG-CAGACTTAC-GTTGTCTGTACTTTTATT----TTTTTATAAAA--ATATAGGAGGATTTT---------------
7  TCT--ACTGTTGATTACAGCTTTTTATTTTTTG----TTTACCTTAAA--TCCACATATAATTTAGGAGGTTTTGTT---
8  GGCT-GTATATGCT-TTTTCTTTTTTAGAAGGA----GTGAAAAAT----------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  CACG-CACGTCCGG-GTCTCCTTGGAAGCTTGA----GGAGCGCCCGA--A-----------------------------
12  TTTT-TTAAAAAGG-AAAACGAGAAGAGGAGGT----TCTT---------------------------------------
13  CAAT-TGCCAAGGT-CTCGCTGTCACCCTCATC----AAGGACAGCAA--C-----------------------------
14  TGTA-CGTTCTACC-TGCCGTTCTCTTTTCAGC----CACTGCGGCTG--AATTTACGCCATTAGCCCCCTCAATGATGA
15  --------------------------------------------------------------------------------
16  ATTC-CCTTAGGAT-ATGCAGTTTTTTATTTTACCAAAAAAACAGGAGGTCGGAGAA-----------------------
17  GACG-AAAACCCTG-GCTTATTTTATTAAAAAA----ATACACTCCTA--TTCCCACCTTTTATGGATTCAGAATCTTGT
18  --------------------------------------------------------------------------------
19  --------------------------------------------------------------------------------
20  TGGC-TTTTTTTAT-TGTATATACAAAACAGAG----AAAAGAGAGAG--GAGAAGCAAA--------------------
21  --------------------------------------------------------------------------------
22  --------------------------------------------------------------------------------
23  CTGA-CTGTAACCG-GGTTCATTTATATGAATC----CGGTTTTTTGT--GCTGGTTATGGGCTTGATTTTGTCCTTTCA
24  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  ATAAACTAAAAAGTGTATGAAATTTTTAGTTAGAGTTTTATAAAACTTTGAGGTAATTCTTATTTGGGCTATTAGGTTTA
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  GTACGGAGACGTATTC----------------------------------------------------------------
15  --------------------------------------------------------------------------------
16  --------------------------------------------------------------------------------
17  CCTGACGACTACACACGCGAAGGAGAGATTCC------------------------------------------------
18  --------------------------------------------------------------------------------
19  --------------------------------------------------------------------------------
20  --------------------------------------------------------------------------------
21  --------------------------------------------------------------------------------
22  --------------------------------------------------------------------------------
23  AACGTAGAAAGGGGAAGGAAAAGTA-------------------------------------------------------
24  --------------------------------------------------------------------------------

  
0  ___________________________
1  ---------------------------
2  ATCATAAGATTAAAGGAGATATAGAAT
3  ---------------------------
4  ---------------------------
5  ---------------------------
6  ---------------------------
7  ---------------------------
8  ---------------------------
9  ---------------------------
10  ---------------------------
11  ---------------------------
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14  ---------------------------
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