BLISSBreaker Lab Intergenic Sequence ServerHome

Intergenic view options: Interleaved

NC_000964.1 Bacillus subtilis (+ 1218578 to 1219320) circular

Islands  G,,,,CA.CAACC.CA...C..,,,,CA.AA.,,,,,,GGC.CA..C..CCCC.G.,,,,,,GGGACGAA.GAACCG.GG
5'-   GAAAACATCAACCTCATTTCTTAAAACATAATAAAAAAGGCTCATTCTTCCCCTGTAAAAAAGGGACGAATGAACCGTGG
    |         |         |         |         |         |         |         |       
    1218580   1218590   1218600   1218610   1218620   1218630   1218640   1218650 
    |         |         |         |         |         |         |         |       
3'-   CTTTTGTAGTTGGAGTAAAGAATTTTGTATTATTTTTTCCGAGTAAGAAGGGGACATTTTTTCCCTGCTTACTTGGCACC
Islands  C....G.AG..GGAG.,,,GAA....G.A..A......CCGAG.AAGAAGGGGACA......CCC.GC..AC..GGCACC
Term (99.98)%  --------------------------------------CCGAGTAAGAAGGGGACATTTTTTCCCTGCTTACTTGG----

  
Islands  .ACCACCC.GA..A..CCA..,,,,.GGAA.CAC.C.GACG...G.AACGGAGAC.GC.CCGGC.GAGCC.AC......C
5'-   TACCACCCTGATTATTCCATTAAAATGGAATCACTCTGACGTTTGTAACGGAGACTGCTCCGGCTGAGCCTACTTTTTTC
    |         |         |         |         |         |         |         |       
    1218660   1218670   1218680   1218690   1218700   1218710   1218720   1218730 
    |         |         |         |         |         |         |         |       
3'-   ATGGTGGGACTAATAAGGTAATTTTACCTTAGTGAGACTGCAAACATTGCCTCTGACGAGGCCGACTCGGATGAAAAAAG
Islands  A.GG.GGGAC.AA.AAGG.AA....ACC..AG.GAGAC.GC,,,CA..GCC.C.GACGAGGCCGAC.CGGA.G,,,,,,G

  
Islands  CAG..CGG.CAGC.GC.CC,,,G.CCA..CCACA..GCCCG..A.C.GC.CCCAGCACCGCAGAC.C.C..C,,,CAGG.
5'-   CAGTTCGGTCAGCTGCTCCAAAGTCCATTCCACATTGCCCGTTATCTGCTCCCAGCACCGCAGACTCTCTTCAAACAGGT
    |         |         |         |         |         |         |         |       
    1218740   1218750   1218760   1218770   1218780   1218790   1218800   1218810 
    |         |         |         |         |         |         |         |       
3'-   GTCAAGCCAGTCGACGAGGTTTCAGGTAAGGTGTAACGGGCAATAGACGAGGGTCGTGGCGTCTGAGAGAAGTTTGTCCA
Islands  G.CAAGCCAG.CGACGAGG...CAGG.AAGG.G.AACGGGCAA.AGACGAGGG.CG.GGCG.C.GAGAGAAG...G.CCA

  
Islands  G,,,CG.G.AC.AC.C.....CA.AGCAAGC....C....GA..GC..CA..A.,,,.CAA..A.AACCAA..G.CA.CA
5'-   GAAACGTGTACTACTCTTTTTCATAGCAAGCTTTTCTTTTGATTGCTTCATTATAAATCAATTATAACCAATTGTCATCA
    |         |         |         |         |         |         |         |       
    1218820   1218830   1218840   1218850   1218860   1218870   1218880   1218890 
    |         |         |         |         |         |         |         |       
3'-   CTTTGCACATGATGAGAAAAAGTATCGTTCGAAAAGAAAACTAACGAAGTAATATTTAGTTAATATTGGTTAACAGTAGT
Islands  C...GCACA.GA.GAG,,,,,G.A.CG..CG,,,,G,,,,C.AACGAAG.AA.A...AG..AA.A..GG..AACAG.AG.

  
Islands  .G,,,,,,CA..C......CCAG.,,,,..G.AA.AA.A.,,,.AACACGAG.GC.G.,,,,.CC..,,,.GA.AAC.GC
5'-   TGAAAAAACATTCTTTTTTCCAGTAAAATTGTAATAATATAAATAACACGAGTGCTGTAAAATCCTTAAATGATAACTGC
    |         |         |         |         |         |         |         |       
    1218900   1218910   1218920   1218930   1218940   1218950   1218960   1218970 
    |         |         |         |         |         |         |         |       
3'-   ACTTTTTTGTAAGAAAAAAGGTCATTTTAACATTATTATATTTATTGTGCTCACGACATTTTAGGAATTTACTATTGACG
Islands  AC......G.AAG,,,,,,GG.CA....AACA..A..A.A...A..G.GC.CACGACA....AGGAA...AC.A..GACG

  
Islands  .A.CAGCG.,,,,,CAGGCAGA.A..A.A.G.,,,,,GCAA.A.GGGCAG,,,,CACA.G,,,,,G.....AA.CAA...
5'-   TATCAGCGTAAAAACAGGCAGATATTATATGTAAAAAGCAATATGGGCAGAAAACACATGAAAAAGTTTTTAATCAATTT
    |         |         |         |         |         |         |         |       
    1218980   1218990   1219000   1219010   1219020   1219030   1219040   1219050 
    |         |         |         |         |         |         |         |       
3'-   ATAGTCGCATTTTTGTCCGTCTATAATATACATTTTTCGTTATACCCGTCTTTTGTGTACTTTTTCAAAAATTAGTTAAA
Islands  A.AG.CGCA.....G.CCG.C.A.AA.A.ACA.....CG..A.ACCCG.C....G.G.AC.....C,,,,,..AG..,,,

  
Islands  A.GC...,,,.GG.AGAAGGA.A..A.G..CA.GGAAG,,,,,C.AACGAAG...,,,.A....,,,..GA.,,,,.AA.
5'-   ATGCTTTAAATGGTAGAAGGATATTATGTTCATGGAAGAAAAACTAACGAAGTTTAAATATTTTAAATTGATAAAATAAT
    |         |         |         |         |         |         |         |       
    1219060   1219070   1219080   1219090   1219100   1219110   1219120   1219130 
    |         |         |         |         |         |         |         |       
3'-   TACGAAATTTACCATCTTCCTATAATACAAGTACCTTCTTTTTGATTGCTTCAAATTTATAAAATTTAACTATTTTATTA
Islands  .ACG,,,...ACCA.C..CC.A.AA.ACAAG.ACC..C.....GA..GC..C,,,...A.,,,,...AAC.A....A..A

  
Islands  A..GCAA.,,,..A...G...CA..A.AA.GAAC..G..CAC.C.A..G..ACAGC......AC,,,,,.AA.CAG,,,,
5'-   ATTGCAATAAATTATTTGTTTCATTATAATGAACTTGTTCACTCTATTGTTACAGCTTTTTTACAAAAATAATCAGAAAA
    |         |         |         |         |         |         |         |       
    1219140   1219150   1219160   1219170   1219180   1219190   1219200   1219210 
    |         |         |         |         |         |         |         |       
3'-   TAACGTTATTTAATAAACAAAGTAATATTACTTGAACAAGTGAGATAACAATGTCGAAAAAATGTTTTTATTAGTCTTTT
Islands  .AACG..A...AA.,,,C,,,G.AA.A..AC..GAACAAG.GAGA.AACAA.G.CG,,,,,,.G.....A..AG.C....

  
Islands  GACGGAACAGAA.,,,,G..G.GG,,,C.CAGG..CA...G.C.GA.A...C.GAGGA...AGCCG.AAGGAGC.G,,,,
5'-   GACGGAACAGAATAAAAGTTGTGGAAACTCAGGTTCATTTGTCTGATATTTCTGAGGATTTAGCCGTAAGGAGCTGAAAA
    |         |         |         |         |         |         |         |       
    1219220   1219230   1219240   1219250   1219260   1219270   1219280   1219290 
    |         |         |         |         |         |         |         |       
3'-   CTGCCTTGTCTTATTTTCAACACCTTTGAGTCCAAGTAAACAGACTATAAAGACTCCTAAATCGGCATTCCTCGACTTTT
Islands  C.GCC..G.C..A....CAACACC...GAG.CCAAG.,,,CAGAC.A.,,,GAC.CC.,,,.CGGCA..CC.CGAC....

  
Islands  ..A..A..AGGGGG...GCGAA.
5'-   TTATTATTAGGGGGTTTGCGAAT
    |         |         |
    1219300   1219310   1219320   
    |         |         |
3'-   AATAATAATCCCCCAAACGCTTA
Islands  AA.AA.AA.CCCCC,,,CGC..A

IGR  +  1218578  1219320  ()  16  oppA

Blast Hits

ID Organism Class Accession Start End Operon
0 Bacillus subtilis B/C NC_000964.1 + 1218578 1219320 oppA [COG4166]
1 Mycoplasma penetrans B/C NC_004432.1 + 141620 141877 MYPE1140 [COG0360]
2 Streptococcus agalactiae B/C NC_004116.1 + 369055 369419 SAG0357 [-]
3 Methanosarcina acetivorans str. C2A A NC_003552.1 + 2413700 2414298 MA1953 [COG4742]
4 Clostridium perfringens B/C NC_003366.1 + 140888 141163 CPE0102 [-]
5 Staphylococcus epidermidis ATCC 12228 B/C NC_004461.1 - 1443981 1444383 SE1406 [COG0162]
6 Clostridium acetobutylicum ATCC824 B/C NC_003030.1 + 748651 748748 gerKA CAC0645 [- -]
7 Brucella melitensis chromosome I P-a NC_003317.1 - 1097370 1097648 BMEI1055 [COG5009]
8 Clostridium perfringens B/C NC_003366.1 - 1626569 1627009 CPE1374 [COG0387]
9 Clostridium perfringens B/C NC_003366.1 + 744471 744878 CPE0596 sipS ftsH [- COG0681 COG0465]
10 Oceanobacillus iheyensis B/C NC_004193.1 + 1257603 1258327 OB1209 [COG1306]
11 Clostridium acetobutylicum ATCC824 B/C NC_003030.1 + 369530 369711 argF/I [COG0078]
12 Streptococcus pneumoniae B/C NC_003028.1 + 642900 642948 SP0667 [-]
13 Listeria innocua Clip11262 B/C NC_003212.1 + 1684504 1685573 lin1675 [COG1012|COG1454]
14 Pasteurella multocida P-g NC_002663.1 + 472107 472481 PM0404 [-]
15 Listeria monocytogenes strain EGD B/C NC_003210.1 + 1676326 1677408 lmo1634 [COG1012|COG1454]

0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  GGTTGCATGGTGAAGAAAATCTTAATTTAGTCCGCTTGAGTCCAGCTCACTTTTTAACCCATAAATAGTCTGCTTGAGCA
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  TTAAATCATCCCTTCTTCATTAAAATAAAAAAAGCCCTCTGAAAAAGCCTACTATCATGCTTTTTCAGAGGACGAGTTAT
14  --------------------------------------------------------------------------------
15  CTAAATCATCCCTTCTTCTTCACTAAAATAAAAAAATCCTCTGAAAAAGCGCAAAATCATGCTTTCTCAGAGGACGAGTT

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  AAACTACCTGTAAAAACCA-------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  CGCGGTGCCACCTCATTTTAGGGGAATCCCCCTATCTCAGTGCTGCTTTTTTGCAGCTGCTCTATAACGGGAGCTCCCGT
14  --------------------------------------------------------------------------------
15  ATCGCGGTGCCACCTCATTTTAGGGATAAACCCTATCTCCGTGCTGCAATATTTGCAGCTGCTCTATAACGGGAGCACCC

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  TCACCCCTACTTCAGTTCAAGGTATCACGCACAAGGCCCATTCCTATTTCATCTATTTATTAGCTCGCACCAAACGCTAA
14  --------------------------------------------------------------------------------
15  GTTCACCCCTACTTGATTTCAAGGTATCACGCACAAGGCCCATTCCTGAATCATCTATTTATTAGCTCCCACCAACCGCT

  
0  ___________________________________GAAAACATCAACCTCATTTC_TTAAAACATAATAAAAAAGGCTCA
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  -----------------------------------TCAATTAGTCTGCTTGAGCG-AAGCGAAACAGACCGCGTACTCCC
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------TTCAATCACCTCAATAAATTTATTCAT--TAAAAAAAGCCCA
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  CTCTCTTTGAAAATCGATGAAAAGTACTAT-----TCTTGTTTCATGTTTTCGTT-TTATAAAATTAAAAAAGGGCCTCT
14  --------------------------------------------------------------------------------
15  AACTCTCTTTAAAAATCGATGAAAAAGTACTATTCTTGTTTGATGTTTTCATTTT-ATAAAAT----TAAAAAAGGGCCT

  
0  TTCTTC___CCCT_GTAAAAA________AGGGACGAATGAACCGTGGTACCACCCTGATTA_____________T__TC
1  --------------------------------------------------------------------------------
2  -----------------ATAG--------GAATCTCCTTTATACTAAAAAACACCCTGTCAT-------------G--CT
3  GAGGCG---CAAT-TCGGGCG--------GCTCAACTCTGCTAAGACAGGAACGACATGATA-------------T--GG
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  TTCTCC---CCAT-ATCTA-----------GGGACGAATGAACCGCGTTGCCACCCTTATTA-------------TCTTG
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  CTCCAA---GCCTAGCAAATATACTAGACAAGGACGAGAGACCCGTGGTACCACCTTGATTAACTGCAAAAACAGT--TC
14  --------------------------------------------------------------------------------
15  CTCTCCAAGCCTA-GCAAATATACTAGACAAGGACGAGAGACCCGTGGTACCACCTTGATTA-------------A---C

  
0  CATTA_AA__ATGG_______AATCACTC__TGA________CGTTTGTAACGGAGACTGCTC___CG_GCTG_AGCCT_
1  --------------------------------------------------------------------------------
2  GGAGC-GC--AAAG-------GCGCGGTT--CCA--------TCCAGCTTCACAGAAGTGCAC---TT-GATT-GATTG-
3  AAAAT-AA--GGTT-------GTATGGAT--CAG--------AATCCGAGCGTTTGAGTCAGA---CG-TTGC-TTTTT-
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  CATTGTAC--ACAA-------GATCACTTCATTA--------AATAAGCTCCAAAGTCCAATT---CC-TATT-TACCTT
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  ACTTA-ATCCATCC-------AA--ATTC--CGAATGGGCGCCTTGTGTAACGATAAGGCCTA---ATCGCTGCATCCT-
14  --------------------------------------------------------------------------------
15  TGTAA-AA--ACAGTTCACTTAATCCATC--CAA--------ATTTCGAATGGGCGCCTTGTGTAACG-ATAA-GGCCT-

  
0  ___ACT___TTT____TTCC_________AGTTCGGTCAGCT____GCTCCAAAGTCCATT__CCACAT__TGCCCGTTA
1  --------------------------------------------------------------------------------
2  ---ATT---AAA----TTAT---------TTCCCATAAATGG----AACACGGTAGAATTT--CATAAA--ACAATCTTA
3  ---CCA---AAA----TATC---------AACCATGTAAAGG----TGGACGACCCAATTT--TTAGTT--TCCACATAA
4  --------------------------------------------------------------------------------
5  ----------------------------------------------TAGATACCTCCTAAA--GTTAGA--TATAGTATA
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  GATACT---TGT----TTTC---------ACCAACCACAAGT----TCTCTATTCATCATTGGGCAAAT--AGTACTACA
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  ---ACT---AAGGAAATTCC---------TTTTCAAACCAGA----GCTCAGAAGTCCATT--C-ACATCATGTCCGCTA
14  ----------------------------------------------------------ATC--TCCTCC--TTTTTATCT
15  ---AATCGCTGT----ATCCTACTAAGAAAATCCTTTCAGATCAGAGCTCAGAAGTCCATT--C-ACATCATGTCCGCTA

  
0  TCTG_CTCCCA_GC_A_CCG_CAGACTC____TCTTCAAACAGGTGAAACGTG_TACT_ACTCTTTTTCATAGCAAGCTT
1  --------------------------------------------------------------------------------
2  TCTG-CTCGCA-ACGA-CCG-CAGACTC----TCTGAAAAGAACTATTA-----TACT-ACT--TATCCGTT--AAGGTT
3  TTTA-GTTTCC-AC-A-TAA-TTTAGTT----TCCACATAATTTAGTTTCCAC-ATAA-TTTAGTTACCGCATAATTTAG
4  --------------------------------------------------------------------------------
5  CCAT-ATCTTG-AA-A-GTT-GACTTTT----AAAATAATGTTAACTATAATA-ATAT-TCAATTCAATATGTTTTGAAT
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  ---------------------------------------------------------------------------TAATT
9  --------------------------------------------------------------------------------
10  TCTT-CTTCAATGC-T-TCG-TATATTAGTTTTTTACTATTATATCCATAGTG-AAAA-GAAAAAGCAAGAAGAAATCAA
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  -CTGACTTTCA-CC-AACCGTCAG-CTC----TCTAAAAACT--TTCATCATGCTACTTACTCTTCATCAAAGCTATCAT
14  ATTT-TATCGT-TT-G-AAT-TTAATCT----TTGCTATCTGAAAAATAGATA-GCCA-TTGATTTTTCATAGCAATATT
15  -CTGACTTTCA-CC-AACCGTCAG-CTC----TCTAAAAACT--TTCATCATGCTACTTACTCTTCTTCAATGCTATCAT

  
0  _TTCTTTTGATT____GC_TTCATTATA__AATCA_ATTATAACCAATTGTCATCAT____GAAAAAACAT_TCTTTTTT
1  --------------------------------------------------------------------------------
2  ATTATATCCA------------AAAATA--AGTAA-AATGTAAACC-TTAACTTTAT----AAGCCTGC---TCTTTGTT
3  -TTACCGCATAA----TT-TAGTTTTCA--CATTA-TAATTTGATTTAGTTTTTCAT----AGTCTTATTT-GAATTTTT
4  --------------------------------------------------------------------------------
5  -ATAAAGGACAA----GT-AACTTTTGA--GAAAG-CTTAAAGAGAACTAGTGGTGG----CTGTGAACTA-GTAGTTTC
6  --------------------------------------------------------T----GTAAATACTT-CCTTTAT-
7  --------------------------------------------------------------------------------
8  -TTCTAT-GATT-------TTGAATAAAATAATTA-ATTGAATAAAATTGTTGAAATTGTCGCAAAATTAT-GATATTTT
9  -TTAATATAAAA----GT-TGTATGGTA--AAAAA-ACTATA--CAACTTTTTTTAT----TAAAAG--------TATTT
10  -AGTTTTTTAGT----TC-TAGA--ATC--GCTCT-TATATTGCTAACTTCCGGTCT-----ATACAGCAGCTCTTTTTT
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  -TT--TTTACTT----GTATTCATCTTA--CATAA-GAACAAACGGAAAGTCAAGAA----AATAAAACCA--CATAAAT
14  -TTCTTTTTACAATACGC-TTCGTTTTA--AGGAG-AACAGCCTAATGCAGAGGTTT----TATTCCAGAT-CATTAGCA
15  -TT--TTTACTT----GTGTTTATCTTA--CATAAGAAAATCACGAAA-GTCAAGAA----AATAAAAC-T-ACTTTATA

  
0  CCAGTAAAATTGTAATAATATAAATAAC_A__CGAGTGCTGT_AAAATCCTTA___A________ATG__ATA_ACTGCT
1  -------------------------------------------------------------------T--AGT-TCAAAT
2  TTAGTGAAATAGCTATGCTA-AAATATG-A--TTATGGAAAA-GTATACAAGT---A--------TTA--AAC-AATCAG
3  CAAATAATATTGCAATAA-ATAATTCTC-C--GGAGAGCCTT-AAAATTCGAA---A--------AA------------T
4  --------------------------------------------------------------------------------
5  TTATTGGTGAATACACCTTGCTATTTTT-A--TTATTCAACG-TTTTATTAAT---G--------AGC--GTA-TCATTA
6  ---GTAAAATTGTAATAATATTATTTTC-T--AAATATATGA-ATATTATTCA---C--------CTT--TAA-AGAAAA
7  --------------------------------------------------------------------------------
8  -----AAAATAGTAGAAAAAATATTGCC-A--AAAATTATTTCATAATGTAGA---T--------ATGTAATT-AATTAA
9  AGAATAA---TGTATTAAAGTATATAAT-A--AAAGTGAAGG-ATAATAATGA---ATATAGTAGAAT--ATA-ATTTTT
10  TGTCTCAAATGCTTCTAATATAATTAT--A--TGAAAAATGT-AGAAT---TA---T--------CTG--CTTTAGTGTT
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  C----AAAATAGCAGTTA-ATAAACAACTA--AGTAAAAAGA-ACTATCATAG---A--------AA---ATC-CCT-CT
14  AGCGCACCATACTCTAACATTGAGTATG-A--ATGCTGTAGT-TTAAAATGGT---G--------ATG--AGG-AAGTTT
15  CTAAAAAGGTTTCAAAACGATAATTAAT-AAACAAGTAAGAA-AAAAGAACTACCCA--------TCT--AAA-ATATAT

  
0  ATCAGCG_TA__AAAACAGGCA_GATATTATATGTAAA_AAGCAA___TATGGGCAGAAAACAC_ATGA_AAAAGTT__T
1  AGAAGTT-TA--TTCTCAATGG-TATAAACTTCTATTT-TTTATT---CTTTTCAAATAAGTAA-ATGA-ATAATCT--T
2  GTCGTCA-TT--ACGGCTTAGA-CCTTTTAAGGATTAT-TTCC-------------------------------------
3  ATTAAAA-TA--TAAGGAG--A-GAAATTAGGCTCAAG-AATGAAATTTTTTTGCGGCTTAAAC-A--A-AAAAGTC--T
4  -------------------GTT-AAATTTATATATACAGAAGAGA---TTTTTATA-ATATTAT-GTAG-AAAAATC--T
5  ATAGAGA-TA--TTTATGAGTA-ACGAACTCTATCTAA-GTATGG---TGGTACCGTGCACAAG-CGCC-CTTACAT--T
6  CAATAGT-TT--CGGGTGGTAA-AC-------------------------------------------------------
7  -------------------TTT-TTCGCGGATAGTTTT-TCAAAG---TGCGGTTTTGCATTAG-CATT-CGATGGA--A
8  AAGAACGCTT--AAAATAGCGT-TTTTTTTGCTTTTAA-GAATAA---TTTTAGAAAAAAGCTTTATAATAAAAGTTGAT
9  TTAGAAT-TA--TATAAATTTA-TTTAATAAAATTAAG-AATCAA---AAATT--ATTTAATAA-ATTA-GATTGTT--T
10  TCCAATG-----AACATAATAA-GGGAATAGAAGGAAA-AGCTAA--------GCAGAGTATAT-ATTA-ATAA------
11  -------------------------------------------------------------------------ATAT--T
12  --------------------------------------------------------------------------------
13  ATCCCCC-TATTAATACAGGAC-ATTATTAATAGTAAA-AAAAAA---TCATTATCTTAATTAC-CTTT-TATTTAC--G
14  ACACATA-GA--AATGGACGCG-TTTTTTGTATTACAA-GTAATC---AACGTTCAAGAATCTA-AAGC-ACCCACG--A
15  TTCA-CT-TC--AGAAAAAGCATGCTATTCTCTCTATT-ATA-------ATGAACACTAACTTC-CTTA-AAAACCC--T

  
0  T_______TAATC_AATTTATGCT_TT_AA_ATGGTA______GAAGGATA___________TTATGT____TCATGGAA
1  T-------TAATT-TTTTAATCAA-TA-AA-AAAGCA------G------------------TTATAA----AAAAAATA
2  --------------------------------------------------------------------------------
3  T-------TAATG-AATTATACGA-AC-AG-CGGATA------AACTTCAG-----------GTGTAC----AG------
4  T-------TAATCTATTTTTTACT-TT-AATAATATA------AAAAAATAATTAGTTTGTTTTATGTAATTTTATCCAT
5  T-------TGTAG-GAGCGCTTTT-TA-AT-ATGTTT------GAATAAAT-----------CACTTA----TATCACTA
6  --------------------------------------------------------------------------------
7  T-------TAACA-TGCGCTCATA-AG-AT-GCAGGC------TTGCAACA-----------GCCCCT----CTTATTTT
8  TCTGAGCATAATA-AATATATAAT-TT-TA-GTTTTATAAAAAGATGTCTA-----------TTATCT----TTTTATAG
9  C-------AAAAT-A--TTACTAT-TT-AA-AAGTCA------AAA--ATA-----------TT-TAA----TAATGAAA
10  ---------ACGA-AATATAGGCAGTT-TA-TTTCTC------CTAGG---------------TACAT----TCATTAAA
11  C-------AAAGC-TATGCATATA-TA-AA-AAACGG------CTAAATCT-----------TAGTAT----AGGGATTT
12  --------------------------------------------------------------------------------
13  A-------GTCAA-CTAGAGATGA-AA-AT-CCCCTT------AAAACTAT-----------ATGATA----AAACCACT
14  C-------GATAG-GGGTTGGCTT-CC-AA-TATTGA------GTAGTGTT-----------TGACAG----CATTACAA
15  A-------TAA---AATATATGTT-TTCAA-ATGATA------ATTCGCTT-----------AAATCC----CAATG--A

  
0  GAAAAACTAACGAAGTTTAA____ATATT__TTAA___ATT___GATAAAATAATA____TTGCAATAAATTATTTGTT_
1  TAAAAACTGCTTT--TTTGT----AGATT--CTAA---ATA---TATAAAA-AATA--------AGTAATTAATTGATA-
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  AAAATAGTGATAAATTTTAAGTAGATAATGCTTAA---ATT---GATAAAATAATAATTATTACAAAGAAGTGTTTATTT
5  TATTTATTAAATATCTTTAA----CTTTT--TTAA---ATT---TATAAAATAATT----TAGGAGGATTTTATCA----
6  --------------------------------------------------------------------------------
7  CGCCGCGTTTTTCGGTGCAA----ATGTT--TTAA---ATT---GATAAAAATATG----TAAACCATCTTGCCTTTGA-
8  ATATAGCTAA-GATGTATTT----AGTTT--TTAATATATT---GATAAAATAAAAA---TTAGTTTAAAATATA-GAT-
9  GACA---TAAAAAAGACACA----ATA-------A---GTT---GATAAAATAATA----TTGAAATAT-TTATGAAAC-
10  GAGTAGTAATGGCAGT--AA----ATATT--GTAA---TAC---GTTGAA----TC----CTGCGAAAAGTGTCGTATA-
11  CTTGTTTAGAGGAAATCCCT----ATATT--TTTA-----T---CATAAAGCA-TA----TTG--ATAAATTATTTGTT-
12  ----------------------------------G---TTT---GATAAAATAATA----TTGAAATCGATATCATAAT-
13  CATACAAACTATGCCTTATA----GACTA--AAAA---TTG---CTTTCCCAGAAG----GACTATCCGCTCATTTTCG-
14  CAGATAAAGCAATAATTTTA----TTGTA--AGGA---AAT---TTTACTAA----------------------------
15  TAAAAAC--ACTCATATAAA----CTATG--CCTA---ATTAACTATAATACAACT----TTACAAAAGGACTTTTCAA-

  
0  _TCAT__TATAATGAACTTGTTCACTCTATTGTTACAGCTTTTTTACAAAAA____TAATCAGAAAA__GACGGAACAGA
1  -TAAT--AATATTGCATTT-TTAAAACTTTTAAAATGCACTCTTTGCCGAGT----TTAGGCTATAT--CCATAAAGAGG
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  ATCTT--TCTAA-GAGTGATATAATTAAATTGTAAA--CAATGTTAACAAAA----TGTTCATTAAT--TATGTTTGTTT
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  -CGCA--TTTGCTGGTCACTAAGCCAATTAGTTGCCATGCGGCACAATAGGT----TCGAGGGTTGG--CAGTTTATGTT
8  -TGAT--GTTAATATTTTAAATAGGCAAATTAAGAATAATTTGTTAAAATAG----TTAACAAAAGT--GATATAATTAT
9  -TTGA--GGGGAAAAGTATGAATTAAAGTTTACAAAGTTATGGTAATTTATG----ATATACTTATA--CTTGATACTTT
10  -T-AT--TCGAAAAAAAAAG--CAG---ATTGTTTG-GATTTTATACAAAAAATCCTAAATATAAAAATGAATGAACAAA
11  -TCATGTTATAATTATTCAAAAATAATGAATAATTATAACACAAGTAAGCGG----TTATAGATTAG--GGGGTTCGT--
12  -TATG--GGAGAAAGAA---------------------------------------------------------------
13  -TCTA--TTTGTGAATATTTTCACGTGAAACACTGGACAAACTTTTATTGAT----GGCTTATACTA--ACGGTGTAATC
14  --------------------------------------------------------------------------------
15  -CCAT--CTTTATCAATTTGTGAAGTTTTTCACGTGAAACACTGGACAAACT----TTTATTGATGG--ATTATACTAAC

  
0  ATAAAAGTT_____GTGGAAACTCAGGTT__CATTTGTCTGATATTTCTGAGGATTTAGCCGTAAGGAGCTGAAAATTAT
1  AGATATATT-----AATA--------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  TTAGGAGGG-----TTATAAA-----------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  TCGACCCTT-----ATCATGTGAATAATC--TGAAGGCAGGATTCCGGGTTT----------------------------
8  CTTTAGTAA-----AATTTATTTTATATA--TGGAGGACTAAAG------------------------------------
9  AAGATTATT-----AAAGGTAAAAAATTC--TAAAATTATTGAGGAATGATTTTAAA-----------------------
10  GAAAAAATTTTTTAGTGGAAA-TCATTTTACCATTTAAATGTAGTTTTTTTTCCTATATACTTAAAATATCATACATACA
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  AAATAAAAC-----AAAAGAATATGGCAC--AGCAACAAGTCAAATTTTTTTGGATTATCAGGGACGTCAAAAGTCTACT
14  --------------------------------------------------------------------------------
15  GGTGTAATC-----AAATAAAACAAAAGA--ATACGGCAAAGCAACAAGCTAAATTTTTTTGGATTATCAGGGACGTCAA

  
0  TATTAGGGGGTTTGCGAAT__________________________________
1  -----------------------------------------------------
2  -----------------------------------------------------
3  -----------------------------------------------------
4  -----------------------------------------------------
5  -----------------------------------------------------
6  -----------------------------------------------------
7  -----------------------------------------------------
8  -----------------------------------------------------
9  -----------------------------------------------------
10  GGAGATTGATTTAT---------------------------------------
11  -----------------------------------------------------
12  -----------------------------------------------------
13  ATGGACATTTAGAGTCCCGCACAAATATTAGGAGGTTCTGGAAA---------
14  -----------------------------------------------------
15  AAGTCTACTATGGACGTTTTGAGTCCCGAACAAATATTAGGAGGTTCTGGAAA

Complementary Intergenic Regions

IGR  -   1218578  1219320  ()  16  trpS