BLISSBreaker Lab Intergenic Sequence ServerHome

Intergenic view options: Interleaved

NC_000964.1 Bacillus subtilis (- 1218578 to 1219320) circular

Islands  A..CGC,,,CCCCC.AA.AA.AA....CAGC.CC..ACGGC.,,,.CC.CAG,,,.A.CAGAC,,,.GAACC.GAG...C
5'-   ATTCGCAAACCCCCTAATAATAATTTTCAGCTCCTTACGGCTAAATCCTCAGAAATATCAGACAAATGAACCTGAGTTTC
  |         |         |         |         |         |         |         |         
  1219320   1219310   1219300   1219290   1219280   1219270   1219260   1219250   
  |         |         |         |         |         |         |         |         
3'-   TAAGCGTTTGGGGGATTATTATTAAAAGTCGAGGAATGCCGATTTAGGAGTCTTTATAGTCTGTTTACTTGGACTCAAAG
Islands  .AAGCG...GGGGGA..A..A..,,,,G.CGAGGAA.GCCGA...AGGAG.C...A.AG.C.G...AC..GGAC.C,,,G

  
Islands  CACAAC....A..C.G..CCG.C....C.GA..A.....G.,,,,,,GC.G.AACAA.AGAG.GAACAAG..CA..A.AA
5'-   CACAACTTTTATTCTGTTCCGTCTTTTCTGATTATTTTTGTAAAAAAGCTGTAACAATAGAGTGAACAAGTTCATTATAA
  |         |         |         |         |         |         |         |         
  1219240   1219230   1219220   1219210   1219200   1219190   1219180   1219170   
  |         |         |         |         |         |         |         |         
3'-   GTGTTGAAAATAAGACAAGGCAGAAAAGACTAATAAAAACATTTTTTCGACATTGTTATCTCACTTGTTCAAGTAATATT
Islands  G.G..G,,,,.AAGACAAGGCAG,,,,GAC.AA.,,,,,CA......CGACA..G..A.C.CAC..G..CAAG.AA.A..

  
Islands  .G,,,C,,,.AA...A..GCAA.A..A....A.CAA...,,,,.A...,,,C..CG..AG.....C..CCA.GAACA.AA
5'-   TGAAACAAATAATTTATTGCAATATTATTTTATCAATTTAAAATATTTAAACTTCGTTAGTTTTTCTTCCATGAACATAA
  |         |         |         |         |         |         |         |         
  1219160   1219150   1219140   1219130   1219120   1219110   1219100   1219090   
  |         |         |         |         |         |         |         |         
3'-   ACTTTGTTTATTAAATAACGTTATAATAAAATAGTTAAATTTTATAAATTTGAAGCAATCAAAAAGAAGGTACTTGTATT
Islands  AC...G...A..,,,.AACG..A.AA.,,,,.AG..,,,....A.,,,...GAAGCAA.C,,,,,GAAGG.AC..G.A..

  
Islands  .A.CC..C.ACCA...,,,GCA.,,,..GA..,,,,,C.....CA.G.G....C.GCCCA.A..GC.....ACA.A.AA.
5'-   TATCCTTCTACCATTTAAAGCATAAATTGATTAAAAACTTTTTCATGTGTTTTCTGCCCATATTGCTTTTTACATATAAT
  |         |         |         |         |         |         |         |         
  1219080   1219070   1219060   1219050   1219040   1219030   1219020   1219010   
  |         |         |         |         |         |         |         |         
3'-   ATAGGAAGATGGTAAATTTCGTATTTAACTAATTTTTGAAAAAGTACACAAAAGACGGGTATAACGAAAAATGTATATTA
Islands  A.AGGAAGA.GG.,,,...CG.A...AAC.AA.....G,,,,,G.ACAC,,,,GACGGG.A.AACG,,,,,.G.A.A..A

  
Islands  A.C.GCC.G.....ACGC.GA.AGCAG..A.CA...AAGGA....ACAGCAC.CG.G..A...A.A..A..ACAA....A
5'-   ATCTGCCTGTTTTTACGCTGATAGCAGTTATCATTTAAGGATTTTACAGCACTCGTGTTATTTATATTATTACAATTTTA
  |         |         |         |         |         |         |         |         
  1219000   1218990   1218980   1218970   1218960   1218950   1218940   1218930   
  |         |         |         |         |         |         |         |         
3'-   TAGACGGACAAAAATGCGACTATCGTCAATAGTAAATTCCTAAAATGTCGTGAGCACAATAAATATAATAATGTTAAAAT
Islands  .AGACGGAC,,,,,.GCGAC.A.CG.CAA.AG.,,,..CC.,,,,.G.CG.GAGCACAA.,,,.A.AA.AA.G..,,,,.

  
Islands  C.GG,,,,,,GAA.G......CA.GA.GACAA..GG..A.AA..GA...A.AA.GAAGCAA.C,,,,G,,,,GC..GC.A
5'-   CTGGAAAAAAGAATGTTTTTTCATGATGACAATTGGTTATAATTGATTTATAATGAAGCAATCAAAAGAAAAGCTTGCTA
  |         |         |         |         |         |         |         |         
  1218920   1218910   1218900   1218890   1218880   1218870   1218860   1218850   
  |         |         |         |         |         |         |         |         
3'-   GACCTTTTTTCTTACAAAAAAGTACTACTGTTAACCAATATTAACTAAATATTACTTCGTTAGTTTTCTTTTCGAACGAT
Islands  GACC......C..AC,,,,,,G.AC.AC.G..AACCAA.A..AAC.,,,.A..AC..CG..AG....C....CGAACGA.

  
Islands  .G,,,,,GAG.AG.ACACG...CACC.G...GAAGAGAG.C.GCGG.GC.GGGAGCAGA.AACGGGCAA.G.GGAA.GGA
5'-   TGAAAAAGAGTAGTACACGTTTCACCTGTTTGAAGAGAGTCTGCGGTGCTGGGAGCAGATAACGGGCAATGTGGAATGGA
  |         |         |         |         |         |         |         |         
  1218840   1218830   1218820   1218810   1218800   1218790   1218780   1218770   
  |         |         |         |         |         |         |         |         
3'-   ACTTTTTCTCATCATGTGCAAAGTGGACAAACTTCTCTCAGACGCCACGACCCTCGTCTATTGCCCGTTACACCTTACCT
Islands  AC.....C.CA.CA.G.GC,,,G.GGAC,,,C..C.C.CAGACGCCACGACCC.CG.C.A..GCCCG..ACACC..ACC.

  
Islands  C...GGAGCAGC.GACCGAAC.GG,,,,,,G.AGGC.CAGCCGGAGCAG.C.CCG..AC,,,CG.CAGAG.GA..CCA..
5'-   CTTTGGAGCAGCTGACCGAACTGGAAAAAAGTAGGCTCAGCCGGAGCAGTCTCCGTTACAAACGTCAGAGTGATTCCATT
  |         |         |         |         |         |         |         |         
  1218760   1218750   1218740   1218730   1218720   1218710   1218700   1218690   
  |         |         |         |         |         |         |         |         
3'-   GAAACCTCGTCGACTGGCTTGACCTTTTTTCATCCGAGTCGGCCTCGTCAGAGGCAATGTTTGCAGTCTCACTAAGGTAA
Islands  G,,,CC.CG.CGAC.GGC..GACC......CA.CCGAG.CGGCC.CG.CAGAGGCAA.G...GCAG.C.CAC.AAGG.,,

  
Term (99.98)%  ---------------------------GGTTCATTCGTCCCTTTTTTACAGGGGAAGAATGAGCC---------------
Islands  ..AA.GGAA.AA.CAGGG.GG.ACCACGG..CA..CG.CCC......ACAGGGGAAGAA.GAGCC......A..A.G...
5'-   TTAATGGAATAATCAGGGTGGTACCACGGTTCATTCGTCCCTTTTTTACAGGGGAAGAATGAGCCTTTTTTATTATGTTT
  |         |         |         |         |         |         |         |         
  1218680   1218670   1218660   1218650   1218640   1218630   1218620   1218610   
  |         |         |         |         |         |         |         |         
3'-   AATTACCTTATTAGTCCCACCATGGTGCCAAGTAAGCAGGGAAAAAATGTCCCCTTCTTACTCGGAAAAAATAATACAAA
Islands  ,,..ACC..A..AG.CCCACCA.GG.GCCAAG.AAGCAGGG,,,,,,.G.CCCC..C..AC.CGG,,,,,,.AA.AC,,,

  
Islands  .AAG,,,.GAGG..GA.G....C
5'-   TAAGAAATGAGGTTGATGTTTTC
  |         |         |  
  1218600   1218590   1218580   
  |         |         |  
3'-   ATTCTTTACTCCAACTACAAAAG
Islands  ,..C...AC.CCAAC.AC,,,,G

IGR  -   1218578  1219320  ()  16  trpS

Blast Hits

ID Organism Class Accession Start End Operon
0 Bacillus subtilis B/C NC_000964.1 - 1218578 1219320 trpS [COG0180]
1 Listeria innocua Clip11262 B/C NC_003212.1 - 1684504 1685573 trpE trpG trpD trpC trpF trpB trpA [COG0147 COG0512 COG0547 COG0134 COG0135 COG0133 COG0159]
2 Staphylococcus epidermidis ATCC 12228 B/C NC_004461.1 + 823154 823520 SE0831 SE0832 [COG0016 COG0073|COG0072]
3 Methanosarcina acetivorans str. C2A A NC_003552.1 + 964802 965340 MA0829 [-]
4 Listeria monocytogenes strain EGD B/C NC_003210.1 - 1676326 1677408 trpE trpG trpD trpC trpF trpB trpA [COG0147 COG0512 COG0547 COG0134 COG0135 COG0133 COG0159]
5 Helicobacter pylori 26695 P-e NC_000915.1 - 91505 91557 HP0086 HP0085 [COG0579 -]
6 Pasteurella multocida P-g NC_002663.1 - 472107 472481 hpkR [COG0583]
7 Clostridium acetobutylicum ATCC824 B/C NC_003030.1 + 2426412 2426521 CAC2324 [COG0463]
8 Clostridium acetobutylicum ATCC824 B/C NC_003030.1 + 21187 21618 CAC0014 serA [COG0075 COG0111]
9 Clostridium acetobutylicum ATCC824 B/C NC_003030.1 - 748651 748748 CAC0643 [-]
10 Listeria monocytogenes strain EGD B/C NC_003210.1 + 2287184 2287517 trpS [COG0180]
11 Streptococcus agalactiae B/C NC_004116.1 - 369055 369419 serS [COG0172]
12 Oceanobacillus iheyensis B/C NC_004193.1 - 1257603 1258327 trpS [COG0180]
13 Chlorobium tepidum TLS Ch NC_002932.3 + 831186 831421 CT0876 [COG0446]
14 Ureaplasma urealyticum B/C NC_002162.1 - 545887 546041 UU475 [-]
15 Ureaplasma urealyticum B/C NC_002162.1 - 506543 506697 UU443 [-]

0  ________________________________________________________________________________
1  TTTCCAGAACCTCCTAATATTTGTG-------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  TTTCCAGAACCTCCTAATATTTGTTCGGGACTCA----------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  GGTGCGCAGTAATTGTGTCCTGAAATTCTGATAACTCATCGAAACTATAGCGTCTTAACTTGTCGTTTGGTTGGAAAAGG
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------

  
0  ________ATTCGCAAACCCCCTAATAATAATTTTCAGCTCCTTACGGCTAAATCCTCAGAAATATCAGACAAATG__AA
1  --------CGGGACTCTAAATGTCCATAGTAGACTTTTGACGTCCCTGATAATCCAAAAAAATTTGACTTGTTGCT--GT
2  --------------------------------------------------------------------------------
3  -------------------------------------------------------------------GAATAATAA--AG
4  --------AAACGTCCATAGTAGACTTTTGACGTCCCTGATAATCCAAAAAAATTTAGCTTGTTGCTTTGCCGTAT--TC
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  -------------ATAAATCAATCTCCTGTATGTATGATATTTTAAGTATATAGGAAAAAAAACTACATTTAAATGGTAA
13  GGGAAAGTTACTATTACGTTACGTTAGAGTGCCAAAGCTTAAAATTTCCTAAGCTCTGTAATCACTAAGTATATTG--CA
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------

  
0  CCTGAGTTTCCAC_____AACTTTTATTCTGTTCCGTC__TTTTCTGATTA____TTTTTGTAAAAAAGCTGTAACAATA
1  GCCATATTCTTTT-----GTTTTATTTGATTACACCGT--TAGTATAAGCC----ATCAATAAAAGTTTGTCCAGTGTTT
2  --------------------------------------------------------------------------------
3  CCTCTGCTCCGAT-----TGTGCAGTTGAGAAATTGCT--GATCTGTATGA----GGTGTGGAACAATTTTTCCCGCTTC
4  TTTTGTTTTATTT-----GATTACACCGTTAGTATAAT--CCATCAATAAA----AGTTTGTCCAGTGTTTCACGTGAAA
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  AATGA-TTTCCACTAAAAAATTTTTTCTTTGTTCATTCATTTTTATATTTAGGATTTTTTGTATAAAATCCA-AACAATC
13  TAGCATGGGTGTT-----CTTTTTTTACTGCATGAAAG--GTTTCTGATAA----TTTTTGTAAAAAACTAATCGGGAGG
14  ---------------------------------------------------------------------------GAACA
15  ---------------------------------------------------------------------------GAATA

  
0  GAGTGAACAAGTTCATTATAATG_AAACA_AATAATTTA__TTGCAATATTATT_____TTATC___AAT_TTAAAATA_
1  CACGTGAAAATATTCACAAATAG-ACGAA-AATGAGCGG--ATAGTCCTTCTGG-----GAAAG---CAA-TTTTTAGT-
2  --------------------------------------------------------------------------------
3  AAGAGCTTTTTAAAACAGGCAAA-CCTCA-AATAAATGGGGTTTCCACATAATTGGT--TTTTA---AAA-TTAGTATTG
4  AACTTCACAAATTGATAAAGATG-GTTGA-AAAGTCCTT--TTGTAAAGTTGTA-----TTATAGTTAAT-TAGGCATA-
5  ----------------------------------TTTTC--TTATATTATGATTACGATTTATC---AAT-TTAAAACA-
6  ---------------------------------------------------TTA-----GTAAA---ATT-TCCTTACA-
7  ---------------AAAATCTA-TTTAC-TTGAATTTA--TTGCAATTTTATT-----TTAAA---A----TAAAATC-
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  ---TG--CTTTTTTTTTCGAATA-TATAC-GACACTTT---TCGCAGGATTC---------AAC---GTA-TTACAATA-
13  ATTGTTAGT-----------------------------------------------------------------------
14  TCTAACTTTAGATCAATCTACTT-TAGGATAAAACTAGA--GTAGATTTTTATT-----TTAAT---AATGTTAAAATA-
15  TCTAACTTTAGATCAATCTACTTTAGAAT-AAAACTAGA--GTAGATTTTTATT-----TTAAT---AATGTTAAAATA-

  
0  TTTAAACTTCGTTAGTTTTTCTTCCATGAACATAATATCCTTCTACCATTT_AAA_GC_ATAAATTGATTAAAAACTTTT
1  CTATAAGGCATAGTTTGTATGAGTGGTTTTATCATATAGTTTTAAGGGGAT-TTT-CA-TCTCTAGTTGACTCGTAAATA
2  --------------------------------------------------------------------------------
3  TTTCAAATTCTTTAGCTCTTCTTCCAGAAACATATTATCCTTTTTCCAT--------------AGTGTTTTATAAGTATT
4  GTTTATATGAGT--GTTTTTAT--CATTGGGATTTAAGCGAATTATCATTTGAAA-AC-ATATATT--TTATAGGGTTTT
5  TTTGGAGAAAGACA------------------------------------------------------------------
6  ATAAAATTATTGCTTTATCTGTTGTAATGCTGTCAAACACTACTCAATATT-GGA-AG-CCAACCCCTATCGTCGTGGGT
7  TGTAATAAATCCAAGTACTTATGTTAGGCAAAACTTATAATCAGTTTGAAA-GGG-TG-TTAATT---------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  TTTA--CTGCCATTACTACTCTTTAATGAATGTA----CCTAGGAGAAATA-AACTGC-CTATATTTCGT------TTAT
13  --------------------------------------------------------------------------------
14  TTTAAACGT--TTAATTTGAATAATACTTAAATAA-------CTAAGAAGT-TAA-GCTAGTAATTGAATAATTAATTAT
15  TTTAAACGT--TTAATTTGAATAATACTTAAATAA-------CTAAGAAGT-TAA-GCTAGTAATTGAATAATTAATTCT

  
0  TCA__TGTGTTTTCTGCCCATATTG_CTTTTTACATATAATATC_TGCCTGTTTT__TACGCTGATAGCAGTTAT_CATT
1  AAA--GGTAATTAAGATAATGATTT-TTTTTTACTATTAATAAT-GTCCTGTATTAATAGGGGGATAG-AGGGAT-TTTC
2  --------------------------------------------------------------------------------
3  TCGACTTTGTCTTCT----ATGTTAACCTCTGACGAATATTCTG-CCCGGGTTCT--TTCGACATTTACCGTCAT---TT
4  TAA--GGAAGTTAGTGTTCATTATA-AT----AGAGAGAATAGCATGCTTTTTCT--GAAG-TGAAATATATTTT-AGAT
5  --------------------------------------------------------------------------------
6  GCT--TTAGATTCTTGAACGTTGAT-TACTTGTAATACAAAAAA-CGCGTCCATT--TCTATGTGTAAACTTCCT-CATC
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  ------------------------------------------GT-TTACCACCCG--AAACTATTGTTTTCTTTA-AAGG
10  --------------------------------------------------------------------------------
11  ------------------------G-GAAATAATCCTTAAAAGG-TCTAAGCCGT--AATGACGACCTGATTGTT-TAAT
12  TAA--TATATACTCTGC-----TTA-GCTTTTCCTTCTATTCCC-TTATTATGTT--CAT--TGGAAACACTAAAGCAGA
13  --------------------------------------------------------------------------------
14  TGG--AGTTTTAAAT-----------------------------------------------------------------
15  TGG--AGTTTTAAAT-----------------------------------------------------------------

  
0  ___TAAGG_ATTTTACAGCACTCGTG__TTATTTATATTATTACAATTTTACTGGAAAA_____AAGAA_TG___TTTTT
1  ---TATGATAGTTCTTTTTACTTA-G--TTGTTTAT-TAACTGCTATTTT----GATTT-----ATGTG--G---TTTTA
2  ----------------------------CCTTTGATGTTATCA----TCGACTATAATA-----ATGAA-TG---AAATT
3  ---GTATC-GTTGTTTTGCGCTTTTC--CTCTCTAATTTCTCTGAAATAGACCACAAAAGATTTAATAA-TGCAATTATT
4  GGGTAGTT-CTTTTTTCTTACTTGTTTATTAATTATCGTTTTGAAACCTTTTTAGTATA-----AAGTA--G---TTTTA
5  --------------------------------------------------------------------------------
6  ---ACCAT-TTTAAACTACAGCATTC--ATACTCAATGTTAGAGTATGGTGCGCTTGCT-----AATGA-TC---TGGAA
7  --------------------------------------------------------------------------------
8  ----------------------------------------------------------------------AA---AAGAG
9  ---TGAAT-AATATTCATATATTTAG--AAAATAATATTATTACAATTTTAC----ATA-----AAGGA-AG---TATTT
10  --------------------------------------------------------------------------------
11  ---ACTTG-TATACTTTTCCATAATC--ATATTT-TAGCATAGCTATTTCACTAAAACA-----AAGAG-CA---GGCTT
12  ---TAA----TTCTACATTTTTCATA--TAATT-ATATTAGAAGCATTTGAGACAAAAA-----AAGAGCTG---CTGTA
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------

  
0  TCATGATGACAATTGGTTAT___AAT_T__GATTTATAATGA_A_G_C____AATCAAAAGAA_AAGCTTGCTATGAAAA
1  TTTTCTTGACTTTCCGTTTG---TTC-T--TATGTAAGATGA-A-TAC----AAGTAAAA--A-ATGATAGCTTTGATGA
2  TCAAAATTACTATCGCTT-T---AAC-A--TATTAATAAT-A-A-C-C----TATAAAAAGAC-ATAAAT--TATTTAGA
3  TTAT-AGAACACTTG-TAATCC-AAT-TTAGAGGGATACGGA-G-G-G----AATGAAATCCT-CTTCGGCAATAGACGA
4  TTTTCTTGACT-TTCGTGAT---TTTCT--TATGTAAGATAA-A-CAC----AAGTAAAA--A-ATGATAGCATTGAAGA
5  --------------------------------------------------------------------------------
6  TAAAACCTCTGCATTAGGCT---GTT-C--TCCTTAAAACGA-A-G-CGTATTGTAAAAAGAA-AATATTGCTATGAAAA
7  --------------------------------------------------------------------------------
8  TATTGACAAAAATTATTTAT---GA------ATATATAATGACA-T-T----AGTTGAATAAT-TATAAACCGTTGAAGA
9  ACA-----------------------------------------------------------------------------
10  -----TTGACAAGCCGTTTTGTAAAC-T--GAT--AGAATGA-AAG-T----AAT-ATAACTG-ATGCGT--TAATAGGA
11  --ATAAAGTTAAG-GTTTAC---ATT-T--TACTTATTTT--------------TGGATATAATAACCTTA--ACGGATA
12  TAGACCGGA-AGTTAGCAAT---ATA-A--GAGCGATTCT---A-G-A----ACTAAAAAACT-TTGATTTCTTCTTGCT
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------

  
0  AGAGTA_GTA_CAC____GTTTCACCTGTTTGA_AGAGAGTCTG_CGGT_GC_TGGGAG_CAGATAACGGGCA__ATGTG
1  AGAGTAAGTAGCAT----GATGAAAGTTTTT---AGAGAG-CTGACGGTTGG-TGAAAGTCAG-TAGCGGACATGATGTG
2  A-AGTT-GAA-AAG----G----------------GAGAATGAT-CGAG-AC-TGAAAG-TCATTC-----CA--ACTTG
3  AAATGG-ACA-AGT----CTGATTTGGTGAAGA-ACGGTGAAAA-CCCT-TT-AAGTGT-TTGATCCCGACAC--TTCTT
4  AGAGTAAGTAGCAT----GATGAAAGTTTTT---AGAGAG-CTGACGGTTGG-TGAAAGTCAG-TAGCGGACATGATGTG
5  --------------------------------------------------------------------------------
6  ATCAAT-GGC-TAT----CTATTTTTCAGATAG-CAAAGATTAA-ATTC-AA-ACGATA-AAATAGATAAAAA--GGAGG
7  --------------------------------------------------------------------------------
8  -GAATA-GTA-ACT----GTTTAACAATTTT---AGAGAGTCAG-TGGTTGG-TGAAAA-CTGATATTTGTTA--TTTAG
9  --------------------------------------------------------------------------------
10  AGATTA-GTA-CAT----TTTGTTGCTTTATAATAGAGAGTCTG-TGGTTGG-TGGAAA-CAGATAAAGCGCA--AAATC
11  AG--TA-GTA-TAA----TAGT----TCTTTTC-AGAGAGTCTG-CGGTCGT-TGCGAG-CAGATAAGATTGT--TTTAT
12  TTTTCT-TTT-CACTATGGATATAATAGTAAAA-AACTAATATA-CGAA-GCATTGAAG-AAGATGTAGTACT--ATTTG
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------

  
0  __GAATGGACTTTGGAGC____AGCTGACCGAACT_________GGAA____AAA___AGTA____G_GCT_CAGCCG__
1  ---AATGGACTTCTGAGC----TCTGGTTTGAAAA---------GGAATTTCCTT---AGTA----G-GATGCAGCGA--
2  --TAATAATTTTTTCATC----TTTTTGGT-AACT---------TAAA----GAA---ATT---------T-AAGTCG--
3  --CTTACATACGATATAT----CTTAACAAACATG---------GAGG----AAA---CAAT----A-AA----------
4  ---AATGGACTTCTGAGCTCTGATCTGAAAGGATTTTCTTAGTAGGAT----ACAGCGATTA----G-GCC-TTATCGTT
5  --------------------------------------------------------------------------------
6  --AGAT--------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  T-GAATCCGCCTCGGAGG----GATTG--CGATGA---------GCAA----TAC-----------G-GC----GATT--
9  --------------------------------------------------------------------------------
10  --GAATGGACTTCTAAGG----A-CTGTTTG---T---------GAAA----GCG---AGTA----GCGAA-CAGCGGCT
11  --GAAATTCTACCGTGTT----CCATTTATGGGAA---------ATAA----TTT---AATC----A-ATC-AATCAA--
12  CCCAATGATGAATAGAGA----ACTTGTGGTTGGT---------GAAA----ACA---AGTATCAAG-GTA-AATAGG--
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------

  
0  ___G_AGCAGT_C__TCCGTTAC___AAACG________TCAG__AGTGAT___T_______CCAT__TTTAATGGAA__
1  ---TTAGGCCT-T--ATCGTTAC---ACAAGGCGCCCATTCGG--AAT--T---T-------GGATGGATTAAGTGAACT
2  ---G-AATAGT-CATTCCGTTAT---CAAT-----------AG--ATTTACAAGT-------GTAT--GCGCATGCAT--
3  --------------------------------------------------------------------------------
4  A--C-ACAAGG-C--GCCCATTC---GAAAT--------TTGG--ATGGAT---TAAGTGAACTGT--TTTTACAGT---
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  ---G-TGTCGT----TAAATTTC---AAT----------TAAG--A-TAAT------------CAT--TTTAAATGAT--
9  --------------------------------------------------------------------------------
10  AAAG-ACCGTTAC--TTCTTTAATAGAAACT--------TTCT--ATTGCT---AAGAG---CCTT--TTTA--GG----
11  ---G-TGCACT-T--CTGTGAAG---CTGGA--------TGGA--ACCGCG---C-------CTTT--GCGCTCCAGC--
12  ---A-ATTGGA-C--TTTGGAGC---TTATT--------TAATGAAGTGATC--T-------TGTG--TACAATGCAAGA
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------

  
0  ___________TAATCAGGGTGGTACCACGGT__TCA___TTCGTCCCT________TT________TTTAC_AGGG___
1  GTTTTTGCAGTTAATCAAGGTGGTACCACGGG--TCT---CTCGTCCTTGTCTAGTATA--------TTTGCTAGGC---
2  -----------AAATTTGGGTGGTACCACGGAAAGCT---TTCGTCCCT--------TT--------TGAAC-AGGG---
3  --------------------------------------------------------------------------------
4  -----------TAATCAAGGTGGTACCACGGG--TCT---CTCGTCCTT--------GTCTAGTATATTTGC-TAGGCTT
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  -----------TAATTAGGGTGGTAACGCGGT---CT---TTCGTCCCT--------TA--------CGTA--AGGG---
9  --------------------------------------------------------------------------------
10  -----------TACTTAGGGTGGCACCGCGGA--TAACCGTTCGTCCCT--------AACA------TTTAT-ATGT---
11  -----------ATGACAGGGTGTTTTTTAGTA--TAA---AGGAGATTC--------CT--------AT-----------
12  -----------TAATAAGGGTGGCAACGCGGT--TCA---TTCGTCCCT--------AG--------AT----ATGG---
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------

  
0  GAAGAATGAGCCTTTTTTATTATGTT__TTAAGAAAT_GAGGTTGATGTTTTC___________________________
1  TTGGAGAGAGGCCCTTTTTTAATTTT--ATAAAACGA-AAACATGAAACAAGAATAGTACTTTTCATCGATTTTCAAAGA
2  GATGAAAG---CTTTTTTGTTAT------TAACAAGT-GGCGGTATTGATTTGTAAATAATTGAAGGGACTATATAAGGA
3  --------------------------------------------------------------------------------
4  GGAGAGAGGCCCTTTTTTAAT----T--TTATAAAAT-GAAAACATCAAACAAGAATAGTACTTTTTCATCGATTTTTAA
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  GATTGAGAGGCTTTTTTTATTGTCAAAATTAAGAATT-TTAAACTTCAGAAGAGTAACTGATAAGGATTTTTTTTCCGTA
9  --------------------------------------------------------------------------------
10  TGGGATGGACGGTTTTTTATTTTCGC--AATCAGTGA-AAAAATTGGAGGAATAATC-----------------------
11  --------------------------------------------------------------------------------
12  GGAGAATGGGCTTTTTTTA--ATGAA--TAAATTTATTGAGGTGATTGAA------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  GAGTTAGCGTTTGGTGCGAGCTAATAAATAGATGAAATAGGAATGGGCCTTGTGCGTGATACCTTGAACTGAAGTAGGGG
2  GGAATTCAGTC---------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  AGAGAGTTAGCGGTTGGTGGGAGCTAATAAATAGATGATTCAGGAATGGGCCTTGTGCGTGATACCTTGAAATCAAGTAG
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  ATTATCATTTGCTTATTTTTATAACCTTTTTTCAGAAAAATAATACAAAAAAGTAAATATTTTAATACATATACAAAATA
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  TGAACGGGAGCTCCCGTTATAGAGCAGCTGCAAAAAAGCAGCACTGAGATAGGGGGATTCCCCTAAAATGAGGTGGCACC
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  GGGTGAACGGGTGCTCCCGTTATAGAGCAGCTGCAAATATTGCAGCACGGAGATAGGGTTTATCCCTAAAATGAGGTGGC
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  AGGGGGCATTCAT-------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  GCGATAACTCGTCCTCTGAAAAAGCATGATAGTAGGCTTTTTCAGAGGGCTTTTTTTATTTTAATGAAGAAGGGATGATT
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  ACCGCGATAACTCGTCCTCTGAGAAAGCATGATTTTGCGCTTTTTCAGAGGATTTTTTTATTTTAGTGAAGAAGAAGGGA
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------
15  --------------------------------------------------------------------------------

  
0  ________
1  TAA-----
2  --------
3  --------
4  TGATTTAG
5  --------
6  --------
7  --------
8  --------
9  --------
10  --------
11  --------
12  --------
13  --------
14  --------
15  --------

Complementary Intergenic Regions

IGR  +  1218578  1219320  ()  16  oppA