BLISSBreaker Lab Intergenic Sequence ServerHome

Intergenic view options: Interleaved

NC_000964.1 Bacillus subtilis (+ 1210753 to 1210943) circular

Islands  AAGGA.,,,,.AA.GGAA...CA..AA.AA.A..ACA...A.CC.,,,,,,..C..GA....GC,,,,.GA..G.AA.AA
5'-   AAGGATAAAATAATGGAATTTCATTAATAATATTACATTTATCCTAAAAAATTCTTGATTTTGCAAAATGATTGTAATAA
         |         |         |         |         |         |         |         |  
         1210760   1210770   1210780   1210790   1210800   1210810   1210820   121
         |         |         |         |         |         |         |         |  
3'-   TTCCTATTTTATTACCTTAAAGTAATTATTATAATGTAAATAGGATTTTTTAAGAACTAAAACGTTTTACTAACATTATT
Islands  ..CC.A....A..ACC..,,,G.AA..A..A.AA.G.,,,.AGGA......AAGAAC.,,,,CG....AC.AACA..A..

  
Islands  .A.ACAAC.A.,,,,.....CGA.AA..CAA.A..A...A..A...C.GAA.,,,GGGA..GC...C.C..G,,,,CG..
5'-   TATACAACTATAAAATTTTTCGATAATTCAATATTATTTATTATTTCTGAATAAAGGGATTGCTTTCTCTTGAAAACGTT
         |         |         |         |         |         |         |         |  
  0830   1210840   1210850   1210860   1210870   1210880   1210890   1210900   121
         |         |         |         |         |         |         |         |  
3'-   ATATGTTGATATTTTAAAAAGCTATTAAGTTATAATAAATAATAAAGACTTATTTCCCTAACGAAAGAGAACTTTTGCAA
Islands  A.A.G..GA.A....,,,,,GC.A..AAG..A.AA.,,,.AA.,,,GAC..A...CCC.AACG,,,GAGAAC....GC,,

  
Islands  .GACAACAAGAGGGGGG,,,GGGGAGC.AGC
5'-   TGACAACAAGAGGGGGGAAAGGGGAGCTAGC
         |         |         |   
  0910   1210920   1210930   1210940   
         |         |         |   
3'-   ACTGTTGTTCTCCCCCCTTTCCCCTCGATCG
Islands  ,C.G..G..C.CCCCCC...CCCC.CGA.CG

IGR  +  1210753  1210943  ()  15  appD appF

Blast Hits

ID Organism Class Accession Start End Operon
0 Bacillus subtilis B/C NC_000964.1 + 1210753 1210943 appD appF [COG0444 COG4608]
1 Streptococcus mutans UA159 B/C NC_004350.1 + 955543 955737 gtfC [COG0366|COG0296|COG5263]
2 Leptospira interrogans serovar lai str. 56601 chromosome II Sp NC_004343.1 - 304965 305502 LB308 LB307 [- COG1238]
3 Streptococcus agalactiae B/C NC_004116.1 + 287151 287362 SAG0279 SAG0280 SAG0281 [- COG1131 -]
4 Mycoplasma penetrans B/C NC_004432.1 + 348842 348981 MYPE2680 [-]
5 Clostridium tetani E88 B/C NC_004557.1 + 256829 258329 CTC00278 [COG1263|COG1264|COG2190]
6 Sulfolobus tokodaii A NC_003106.1 - 854488 854565 ST0877 ST0876 ST0875 [COG3391 - COG2259]
7 Methanosarcina mazei strain Goe1 A NC_003901.1 + 458211 458506 MM0351 MM0352 [- -]
8 Buchnera aphidicola str. Sg (Schizaphis graminum) P-g NC_004061.1 + 259377 259480 dxr [COG0743]
9 Thermoplasma volcanium A NC_002689.2 + 1378261 1378443 TVN1313 [COG1032]
10 Clostridium tetani E88 B/C NC_004557.1 + 194521 195169 CTC00228 [COG0176]
11 Sulfolobus solfataricus A NC_002754.1 + 957405 957453 SSO1107 [-]
12 Rickettsia conorii Malish 7 P-a NC_003103.1 - 1070373 1070473 RC1169 [-]
13 Pasteurella multocida P-g NC_002663.1 + 1582568 1582620 nadR PM1388 [COG1396|COG1056|COG3172 -]
14 Campylobacter jejuni P-e NC_002163.1 - 1396194 1396279 thiL Cj1457c [COG0611 COG0585]

0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  TTTATAGTATGATCTATTTTTTTATTCATTCAGTTCAGATTTCTAAGATAAGTATTTTATTTTTAGGCTTATAAGATACG
3  GAGCATGAAGAAGTTGGGAAAGATACCTCAACTTCTTTTTTGTAAGATATAGGATGGATTTGAG----------------
4  --------------------------------------------------------------------------------
5  TTATTGTATGTAGCTTAGGATTGGGCAGCAGCTTTATAATAGAAGCTAATGTTAAAAGATATTTTAAAAATAAAAAATTA
6  --------------------------------------------------------------------------------
7  GATTAAAAAACTCTTCAATTTTTTCCTTTTTTATATTTTTATAATCCTTTTCCTAATCCTTTTCCTTTTTACTTTTTAAA
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  TTATATATTTATCTTGCATTTTTATATATACATAGTTCGGAATTCATGTCTATAAACCCTATCTAATTTAAAGATTTTTT
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  AAATTTAAAATTCAAAATTTTCAGATTATATTTTGATTTTGTAGTAAGTAGGGTTTTTGAAAGCTAAAAGTGAATTTTAA
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  AAGCATAATATAATTAGATGTGATGTAACAACCGCAGGGTTATATGATCCAGACATATATATATGTTCTGAGGACATTAA
6  --------------------------------------------------------------------------------
7  GATTTTTTATCCGAAGTAT-------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  AGATTAACAATCATACCTTTAATTTAAAGAATTTTTATGTTAGTAGTTATCTATATGTTATATATCATGATTTAAACTAC
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  AAAACTGTTTTTTATGAAAATTGGCCGTTTGCTAAACCCTATACAATAGTAGAATACTGTAGGTTGAAACAAATTCCGTT
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  CTTTTATATAGATAAAAAAGATATAGCAAAAGTAGAATTAGAGGATTTGTTGGATCAAGAAGAAATAAAATTTAAATTGG
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  TATTAACATAAAAATACAGCATAAGTTAATCCTTATGCTGTATTTTTATTTACTTTTTAATTCATCTAAACAATCTTTGC
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  TAAAAGCAGAGATTTTAG--------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  ATAACTATTTAAAGAGTAGAGGTATATTAGATGGATGTATTTAATACTTTAATGAAGGCAGATGTAATTTTAGTACTCAT
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  ATATGTTTTTTCCTTTATAATAATTTACATTTCTTGCATCGCCACAGAAGATGCAAGCAGGCTCGTATTTTTTAAGCATA
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  AGTTTCCATAGGACTTTTAATTCAGAAAAAGAACTTTAAACAAATTATTGTATCTGTTATTAAAGCTAGTGTAGGATATG
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  ATATGTTCACCATCTATAAAAATTTCTAGAGGATCTTTTTCTGCAATGTTCAAAGTTCTTCTTAGTTCTATTGGAATTAC
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  TAATTATAGTTTTAGGTTCAGATATAGCTTTGAAAACATTAAGTATATTAAGTTTAGTTATACGTAGATCATTACATATA
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  AATTCTCCCTAATTCATCTACTTT--------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  TTTGACATAATGCTGTATTTTTATTTACTTTTTAATTCATCTAAACAATCTTTGCATATGTTTTTTCCTTTATAATAATT
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  TACATTTCTTGCATCGCCACAGAAGATGCAAGCAGGCTCGTATTTTTTAAGCATAATATGTTCACCATCTATAAAAATTT
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  _______________________________________________________________________________A
1  --------------------------------------------------------------------------------
2  -------------------------------------------------------------------------------T
3  -------------------------------------------------------------------------------A
4  --------------------------------------------------------------------------------
5  CTAGAGGATCTTTTTCTGCAATGTTCAAAGTTCTTCTTAGTTCTATTGGAATTACAATTCTCCCTAATTCATCTACTTTT
6  --------------------------------------------------------------------------------
7  -------------------------------------------------------------------------------A
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  -------------------------------------------------------------------------------T
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  AGGATAAAATAATGGAATTTCATTAATAA____TATTACATTTATCCTAAA_AA__ATTCTTG_ATTTTGCAAAATGATT
1  ----------------------------------------------------------TTGAA-AAAACGCTCTCTTAAG
2  ATTAGAGTTGTTGAAAAATTAATTCTCAA----TCTTGTTTTTGTTTCATG-AA--ATGCTCG-ATTG-----AAGCAGT
3  ATAGTTTTGATAGACTGATAAGTGATGGA----AAGCACTCTTTTTTGAAA-AC--GTTTGAC-AAACATTCCATAGCGC
4  ---------------------------------------------GCTTTA-AA--AATATTA-AT-----AAAAT-ATT
5  CTTACTACACCTGTTGATTTCATTATTAACCCCTCCTTATTTTTTACTATATAA--AAACGTA-ATTTAATAAATT-ATA
6  --------------------------------------------------------------------------------
7  AAGTTTCATTTACCGATTTT--TGAATAG----TTTCAC-TTTCTCATTCG-CTCCATTTTTGTAATACTTAAATTGATT
8  ------------------------AGTTA----CATAGAATATTTTGTAAA-TC--ATTTTCT-ATATT------TTATC
9  ------AGATTCAATATTTAAATTAATAA----TATAACATTTATTATAAT-TT--AGAAAGA-GTCCGACCGTTTTCTG
10  CTTACTACACCTGTTGATTTCATTATTAACCCCTCCTTATTTTTTACTATATAA--AAACGTA-ATTTAATAAATT-ATA
11  --------------------------------------------------------------------------------
12  ------------------------------------------------------------AAA-ATAAATCTTGACGATA
13  --------------------------------------------------------------------------------
14  -------------------------------------------------------------GG-TTTTTCCTTAAATATT

  
0  G___TAAT__AAT__ATACAA______CTAT____AAAATTTTTCGA_TAATTCAA_TA__TTATTTAT__TAT_TTC_T
1  T---TAAT--TAA--GAGGGC------GTTT----CTAGGGTTAGGA-GTTTTAAA-TA--TTATTTAT--TAT-TTT-T
2  T---TGCT--AAT---TGCCG------CTAT----AGAATTTTTCAA-TAATTCTA-TT--TTATAGTT--TTG-AGT-C
3  A---GTAT--AATTGATAAAA------CTAT----TGTATATATAAAATAATACAACTA--TTATTAAT--TAT-CTT-T
4  GGGTTAATCAAAA--AGATTA------ATTC----AATATTTTTTAT-TGTTTTAA-TAGATTAATAAT--CAT-GTC-T
5  T---TAA----AT--ATACAATTTAGTCTATGTGTAAAAATTTACAA-TAATTCAA-TA--TTATTATA--TAT-TAC-A
6  ----------------------------------------------------------C--TTAGTTGTGATAT-TTC-T
7  T---TCAT--ATG--AAAAAA------TATT----TATATCTTTA----AATTCAA-TA--TTATTTGT--TAT-TACCT
8  G---TATT--ATT--TTTGTA------CAGT----CA---TTTTAGC--AATTCAA-TA--TTATTTAT--TAA-TAT-T
9  A---CTAA--CTC--CAACCA------TAAA----AATAAGCGCAAT-AGATCATC-CA--TGCAAGAA--AAA-GGA-C
10  T---TAA----AT--ATACAATTTAGTCTATGTGTAAAAATTTACAA-TAATTCAA-TA--TTATTATA--TAT-TAC-A
11  ----------------------------------------GAAAAAG-AGTTTTAA-AT--GAATTTAT--AAT-TTC-T
12  A---CTTT--AAA--TGTTAT------GCAT----AAAATTTTTC-A-TAAATCTA-TA--ATTTTTAT--TATCTTA-T
13  -------------------------------------TCGCTGAAAA-GTGCGGTC-TT--CACTTTAC--TAT-TTC-T
14  T---TTAT--ATT--ATA------------T----AAAATTTTTCTA-AAATTCAC-TA--GAATTTAA--AAG-GAA-A

  
0  __GAA___TAAAGGGATTGCTTT__CTCTTGAAAACGTTTGACA_ACAAGAGGGGGGAAAGGGGAGCTAGC_________
1  --CTA---AAAAATGAAGAATTT--CATTATAAATTAATTACGA-TACATTGTGCTTTTGTTATAAAAGTGTTACAATAC
2  --GTA---ACTTGATTAAGCCAA--GTTAATCTCTATCGTCTTC-TAAAAAGACAATATTGGTTCCAAAACATTGAACGT
3  --TTA---GAAAGGT-TTGTTT----------------------------------------------------------
4  TTGAAGTCTTAGGTGTTTGATTAAGGTCTTAAAAAAATTTAAAATATAAAAGT---------------------------
5  --TCT---ATTGTTACTATACTA--CCATTATATTGAAAAGTCA-ACATAATTTAAATTAATTAAATTTTAAATACTCTG
6  --GAA---TAAAGGGTTTAAAAA--ACAAGTATTTTTAAATACC-TACTTTGCTTACAATAATTATGT------------
7  --AAA---TTAAAAATAGTAATA--CGAATTGAATCAGTAATAC-GGGGAAAAAAGGGTCGATTAACAGGGGTGTCTTA-
8  --AAA---AATTTTTT----------------------------------------------------------------
9  --AAA---AATACAGTACTTTGG--AAGAAAAGTTTATCAATAA-AAAGAGTCTACATATCAAGGATAAG----------
10  --TCT---ATTGTTACTATACTA--CCATTATATTGAAAAGTCA-ACATAATTTAAATTAATTAAATTTTAAATACTCTG
11  --GAA---TAAAATATAAGAAT----------------------------------------------------------
12  --GTA---TACAAGGAAATATTA--GTTTTACCG----------------------------------------------
13  --GAA---TAAAAGGAAAGCATC---------------------------------------------------------
14  --TTT---TATAAAATCACGCAT--T------------------------------------------------------

  
0  ________________________________________________________________________________
1  TAGTGTTTTATATCAAAACACTAACTCTAACTATTTTTGGAGGAAAT---------------------------------
2  TTTTAAATTAGGTATTTAACAATTGAAAGTATTTACGAACCTAAACTTATGTTCTTGTTCACAGTTAAATTTTTAAGAAC
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  ATGAGATGGTATAATGGTTATAATAGATTTATTGAAAGGAGTAGTTTATATGAAATTTTTTATAGACACAGCTAATGTAG
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  ATGAGATGGTATA-------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  AGACTT--------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  AAGAAATAAAAAAAGTAGCTAAATGGGGAGTTTTAGATGGGGTCACAACTAATCCAACCTTAATAGCAAGAGAAGGCAGA
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  GACCTTAAAGAAGTTATTGAAGAAATATGTTCAATTGTAGATGGACCTATAAGTGCAGAGGTTATTAGTTTAGAATCAGA
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  AAAAATGGTAGAAGAAGCTAAAGAACTTATAAAAATACACAAAAATATAGTAATAAAAGTGCCTATGTGTGAAGAAGGAT
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  TAAAAGCAGTTAGTGAATTAACTAAATTAGGTATAAAAACTAATGTTACACTAATCTTTTCAGCGCAACAAGCATTATTG
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  GCAGCAAAAGCCGGAGCCACATATGTTAGTCCTTTTTTAGGTAGAATAGATGACATAGGAAGTTTTGGTATCCAATTAGT
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  AGAAGATATAGTTACTATATTCACTAACTTTGGTATAGAATCAGAGATACTCGTGTTTTGTTTTAAAAAAATAATATAGG
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  __________
1  ----------
2  ----------
3  ----------
4  ----------
5  AGGAATACCA
6  ----------
7  ----------
8  ----------
9  ----------
10  ----------
11  ----------
12  ----------
13  ----------
14  ----------