BLISSBreaker Lab Intergenic Sequence ServerHome

Intergenic view options: Interleaved

NC_000964.1 Bacillus subtilis (+ 1194300 to 1194505) circular

Islands  CGCGG.CAGCC.G.......A.GCGGC.G,,,.GCGGCACCGCA.CAACG.....G.GC.GGAG.CG.GC.GA.......
5'-   CGCGGTCAGCCTGTTTTTTTATGCGGCTGAAATGCGGCACCGCATCAACGTTTTTGTGCTGGAGTCGTGCTGATTTTTTT
  |         |         |         |         |         |         |         |         
  1194300   1194310   1194320   1194330   1194340   1194350   1194360   1194370   
  |         |         |         |         |         |         |         |         
3'-   GCGCCAGTCGGACAAAAAAATACGCCGACTTTACGCCGTGGCGTAGTTGCAAAAACACGACCTCAGCACGACTAAAAAAA
Islands  GCGCCAG.CGGAC,,,,,,,.ACGCCGAC...ACGCCG.GGCG.AG..GC,,,,,CACGACC.CAGCACGAC.,,,,,,,

  
Islands  .GAGCGGAA..CCCA..GAACAG,,,,...A.,,,.GAA.,,,,,.A..,,,.A.ACGA..GAA..AA.....A..CA.G
5'-   TGAGCGGAATTCCCATTGAACAGAAAATTTATAAATGAATAAAAATATTAAATATACGATTGAATTAATTTTTATTCATG
  |         |         |         |         |         |         |         |         
  1194380   1194390   1194400   1194410   1194420   1194430   1194440   1194450   
  |         |         |         |         |         |         |         |         
3'-   ACTCGCCTTAAGGGTAACTTGTCTTTTAAATATTTACTTATTTTTATAATTTATATGCTAACTTAATTAAAAATAAGTAC
Islands  ,C.CGCC..AAGGG.AAC..G.C....,,,.A...AC..A.....A.AA...A.A.GC.AAC..AA..,,,,,.AAG.AC

  
Islands  ..A.AA.G..,,,.AA...CAC,,,GACCAAGAGGG.GAAC..G..
5'-   TTATAATGTTAAATAATTTCACAAAGACCAAGAGGGTGAACTTGTT
  |         |         |         |         |     
  1194460   1194470   1194480   1194490   1194500   
  |         |         |         |         |     
3'-   AATATTACAATTTATTAAAGTGTTTCTGGTTCTCCCACTTGAACAA
Islands  AA.A..ACAA...A..,,,G.G...C.GG..C.CCCAC..GAACAA

IGR  +  1194300  1194505  ()  15  argC argJ argB argD

Blast Hits

ID Organism Class Accession Start End Operon
0 Bacillus subtilis B/C NC_000964.1 + 1194300 1194505 argC argJ argB argD [COG0002 COG1364 COG0548 COG4992]
1 Lactobacillus plantarum WCFS1 B/C NC_004567.1 + 3228202 3228248 iolG4 lp_3613 lp_3614 [COG0673 COG4702 COG0604]
2 Mycoplasma penetrans B/C NC_004432.1 + 373851 374052 MYPE2860 MYPE2870 MYPE2880 [COG0124 COG0173 COG0220]
3 Streptococcus pyogenes B/C NC_002737.1 + 953870 954087 SPy1161 rnh [COG1161 COG0164]
4 Sulfolobus solfataricus A NC_002754.1 - 2623073 2623144 SSO2868 SSO2867 SSO2866 [COG0697 COG3370 -]
5 Streptococcus pneumoniae B/C NC_003028.1 + 884069 884168 SP0931 SP0932 SP0933 SP0934 SP0935 SP0936 [COG0263 COG0014 COG0345 - COG0125 COG0470]
6 Clostridium perfringens B/C NC_003366.1 - 1370711 1370989 CPE1172 [COG0560]
7 Clostridium perfringens B/C NC_003366.1 + 407944 408079 CPE0324 CPE0325 [COG3669 -]
8 Streptococcus agalactiae B/C NC_004116.1 + 103406 103547 hrcA grpE [COG1420 COG0576]
9 Staphylococcus epidermidis ATCC 12228 B/C NC_004461.1 - 259883 260050 SE0259 [COG1292]
10 Staphylococcus epidermidis ATCC 12228 B/C NC_004461.1 + 390102 390823 SE0397 SE0398 SE0399 SE0400 SE0401 SE0402 SE0403 [COG1009|COG2111 COG2111 COG1006 COG0651 COG1863 COG2212 COG1320]
11 Clostridium tetani E88 B/C NC_004557.1 + 1921361 1922020 CTC01810 [-]
12 Ureaplasma urealyticum B/C NC_002162.1 - 84382 84471 UU068 [-]
13 Rickettsia conorii Malish 7 P-a NC_003103.1 + 303131 303366 RC0300 [-]
14 Borrelia burgdorferi Sp NC_001318.1 + 783258 783323 BB0742 [COG0488]

0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  ATTGACAATGATTTAATGATTATCCTTAT---------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  AGCCTCCTACAGTAGGAATTCTTATTAAATTTGCTGATATAAATATTATTGCAATCATTAGTGCT---------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  AATAAAACCTCCTTTCACTATATATATCGAAATAGATTGAAAAAAAGGACACATTTTTTGAAAAATATAGGCAAATGCCT
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ______________________________________________CGCGGTCAGCCTGTTTTTTTATGCGGCTGAAATG
1  --------------------------------------------------------------------------------
2  ----------------------------------------------TTATAAATAAATTATTTAGTTTGTGGTTTTATTT
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  ----------------------------------------------GTAAAAACTGTCTTATGAAATTTACTGTTAGTGT
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  TTGATGTGATACAAACGTCATTTATCATTAATTATGAAACCTGTTTTAGAAGGTATATGAGGTAAGTAGAATTGTTAAGT
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------------------------
13  ---------------------------------------------------------------CTGATTGTATTATAAAC
14  --------------------------------------------------------------------------------

  
0  CGGCACCGCATCAACGTTTTTGTGCTGGAGTCGTGCTGATTTTTTTTGAGCGGAATTCCCATTGAACAGAAAATTTA__T
1  -----------------------------------------------------------------TTAACTTGTGTA--T
2  TGACTTAGCAAAACCGTTTAATAACACATTAAGTAATTACTTTATAACAAACTAATTCATTTATTGCTTTTTATAAG--A
3  -----AGTTTCGTCTCTCTATCTAGTTTTGATAACTAGATTATATGATTAATGAAAACTTATTGCAAGCAAAAACTG--T
4  -----------------------------------------------------------------AAAACAAATTTA--T
5  --------------------------------------------------------------TAGAAAAGAAGGTTT--T
6  TAACATTCATATTTTTCTACCTCCAGAACCAAAATATATTTATATATTAAAATATTATTAGTGTATTATCAAATGTA--T
7  -------------------------TAAACTGTTTTAAATTTTCTTTTATT---ATTCATATAGATAATAAAGTGAA--T
8  -------------------------------TATTAGCACTCTTTGAATAAGAGTGCTAATTTTTGATGTTTTTTCC--T
9  ---------------CTCGTTAATATCATACTTTTATCATATACAACAGACTTCTCTAAATCAAAATCTCTTTATTA--T
10  TGTAAAAGAAAAAATTGGAACTTGATATTTAAAATAACCAACTTAAAAGATTGATCAGTGTCTAAAATTACTATTTA--T
11  --------------------------------------------------------------------------------
12  --------------------------------------------------------------TATTTTAGTAATTAAAGT
13  ATCTTTACTATTTTTTCGTTTGCAGCAAAGCAGCGAGAATTAAATAAAGTAAATGATTATTACCATAATGTACATAA--C
14  ----------------------------------------------------------------------------C--T

  
0  AAA_TGAA__TAAAAATATTA_A_________ATATACGATTG___A___A__TTAA__TTT__T____T_ATTCATGT_
1  TAA-TCAA--TAAAAATATTA-A---------AGGTGGTCTTT---A---T--TT-------------------------
2  AAA-TGAA--TAAAAATATTT-A---------CTCT--GATTT---A---AACTTAA--TATGAT----T-ATTTAATG-
3  AAA--GAC--TTAAAAGAGGA-A---------AG-TAGAAATGGCGA---A--GTGA--AGC--T----A-AT-CATGC-
4  AAA-TGAA--TACGCTGACTT-T---------TGTTAGGTAAC---T---T--TAAA--GTT--T----A-CTCCCAAA-
5  AGG-GCCT--TCTTTTTCCTA-T---------CAACTCTTTTC---T---A--TTTC--CTG--T----T-ATTCATGT-
6  GGG-TACAATTATAAATAATT-A---------A-ATCCCTTTA---A---A--ATT---TAT--T----T-ATTTATGA-
7  CTA-T--A--TTAAAAAATTA-T---------ATGTA-GTTTT---ATAGA--TGAA--TAA--A----A-ATAAATGT-
8  TGA-CTAT--CTTTTAAAAAG-G---------AGTATAATAAA---A---T--CATA--GTT--A----G-CAGTCGAT-
9  AAAATCAT--TTTTAATCCAA-A---------AAGTATTTTTG---A---A--AATA--TTT--C----T-AATTATCTG
10  ATA-TGAA--TTAAAATATTA-AGATCTCCCAATATGAGAATG---A---A--TTAG--TTT--A----A-GTTTATCG-
11  --------------------------------------CTCAC---T---T--TTAA--TAT--T----T-ATT-ATGT-
12  AAA-TAAA--TTAAAATATTATA---------ATATACG--TG---T---A--TTAAACTCA--T----G-ATTTATTT-
13  CCT-CTAA--TAAAAATATTA-C---------AAATATGATTT---A---A--TTAT--TTG--TATAAT-ACTCAGTT-
14  CCT-TATA--TAATAATATTA-A---------ATATACGAAAA---A---A--CTGA--GAG--T----TGAGTCAATA-

  
0  TAT_AATGT_TAAATAATTTCACA__AAGACCAAGAGGG_TGAACTTGTT______________________________
1  --------------------------------------------------------------------------------
2  GAG-ATTAG-TA--------------------------------------------------------------------
3  TAT-AATGT-TAAAGAATTGATTG--GGATAGATGCCTT-CTGTCGCAATCAGACTATTTTATCACGAAGAAGATGATGC
4  CAT-TTAGC-AC--------------------------------------------------------------------
5  TAT-AATGGATAAATATGAATAAT--CGGAGTGAGACT------------------------------------------
6  TAT-ACTGT-TAAATAATA-CATA--AATAGAAATTTTA-CAGAAGAGGAGTGAAGAAA---------------------
7  TATTAAAAT-TAAAGTTATAATAA--GGGAGAATATAGT-G---------------------------------------
8  GTG-TAAGA-GTGCTAATTTCAGA--AAGACCGAGAGGGGTGATGTTTTT------------------------------
9  TAT-ACT-T-TAAACAAATACTTTGCAAGTTAAAAAGGGATGAATAAAAATATTAAA-----------------------
10  ATG-ATTGA-AAAATTATAGCCTC--ATGGATTCTATCT-TATATAAAATAAAGTTCTATTCCCTTTTGGATATAAATAA
11  CAT-TATGT-TAAATAATTTCTTT--TATATAATATTTT-TGAGGTGATTCTATTAGATAATTTAATAATTTACTGAAAA
12  GAT-AACTA-AAAGGAAATAATAT--------------------------------------------------------
13  TAG-TATAT-TGGGTATATAGGTG--TATTTGTGTATGT-AATTCATTTAACGTAATCTTGGTGAAATTAGTATCGGCGA
14  TAT-TTATA-TGGTGC----------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  TACGAAAGGAATGATACACTC-----------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  GAATAGTTACCTTTTTGTGATATGCCAATTCAGAAAAAAAGCGACAGTGCTTGAATCTATGTATGCTCAATAAACTCATT
11  ATAATAGACTTTTATAACTTTTCTTTAACTGTTGGATCGCCTCCCAAGTTTTAATAACAGATCTTTACTAATAGCAAGAA
12  --------------------------------------------------------------------------------
13  TATTGCTTTTATT-------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  CAAATCAACTAGCAATATCAAATCATAAATCGTGTTGCACCATAATAAGGATTAAAACCTGTTAGTTTAACTAATTTAAG
11  GTTTTTCTTACATAAAATTAAAATTTTTCGTAGCAAAGCGAAAGAAAATATCTATAATTATTCATTATTCACTATTAGTT
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  AAAAACATTTGATTATCTTCTCTTTCAATCGGGAATATTAATTTCTATCATTCAACAATATTTTGGATATCAGATAACTT
11  GTTCATTATTGTTAAAATAAAAATTTTCGTTGGTAAAATTTTTATTTTAATAATCAAAGTACTTACATTATATTATAAAT
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  AAGAAATATTGAGATTTATTGAAATACGATATGTTTCAAATCGCCATACAATGATTACACTTAATAAATGATTACACTTA
11  TTTTTTTAAAAAATAGTATTAAAACTTTTATTTTACACAATATATTATTAAGAACTTTTGCAAAGGAGTGTTTTTTATGC
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  ATATAAATGTAAAAAGAAAAGGAGGGGTTAA-------------------------------------------------
11  CTAGTAGAACTTATTCTTTTAGGGATGAGCAAGGAAATTTAGTTAAATACGTAGTAAAGGAGTATCTTTCTCTCAATGAA
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  AATGAGTATATACTAATGTCTCCCCAGGTAGATACATCTCAGATAGAAGTATATAAATTTAATTTTATAAACGGTAATGA
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  ________________________________________________________________________________
1  --------------------------------------------------------------------------------
2  --------------------------------------------------------------------------------
3  --------------------------------------------------------------------------------
4  --------------------------------------------------------------------------------
5  --------------------------------------------------------------------------------
6  --------------------------------------------------------------------------------
7  --------------------------------------------------------------------------------
8  --------------------------------------------------------------------------------
9  --------------------------------------------------------------------------------
10  --------------------------------------------------------------------------------
11  AGCTTTAGAACTTGTAGAAAATGATGAAGAACTTAACAAAATTAAGTCTCTTTCAAAAATAATTTAAAAGGAGGACTCAT
12  --------------------------------------------------------------------------------
13  --------------------------------------------------------------------------------
14  --------------------------------------------------------------------------------

  
0  __
1  --
2  --
3  --
4  --
5  --
6  --
7  --
8  --
9  --
10  --
11  AT
12  --
13  --
14  --